Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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5' |
C |
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G |
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C |
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A |
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A |
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G |
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C |
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T |
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A |
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G |
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C |
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T |
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T |
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G |
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G |
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C |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
- |
C |
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G |
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T |
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T |
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C |
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G |
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A |
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T |
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C |
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G |
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A |
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A |
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C |
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C |
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G |
5' |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-32_O6-1 | 3.812 | 2.674 |
| Mean | Stdev |
1_N3-32_H1-1 | 3.503 | 2.359 |
| Mean | Stdev |
1_O2-32_H21-1 | 3.367 | 2.317 |
| Mean | Stdev |
10_H1-23_N3-10 | 1.968 | 0.095 |
| Mean | Stdev |
10_H21-23_O2-10 | 1.899 | 0.125 |
| Mean | Stdev |
10_O6-23_H41-10 | 1.998 | 0.179 |
| Mean | Stdev |
11_H41-22_O6-11 | 1.975 | 0.169 |
| Mean | Stdev |
11_N3-22_H1-11 | 1.953 | 0.092 |
| Mean | Stdev |
11_O2-22_H21-11 | 1.887 | 0.119 |
| Mean | Stdev |
12_H3-21_N1-12 | 1.956 | 0.111 |
| Mean | Stdev |
12_O4-21_H61-12 | 2.003 | 0.183 |
| Mean | Stdev |
13_H3-20_N1-13 | 1.972 | 0.121 |
| Mean | Stdev |
13_O4-20_H61-13 | 2.000 | 0.195 |
| Mean | Stdev |
14_H1-19_N3-14 | 1.966 | 0.099 |
| Mean | Stdev |
14_H21-19_O2-14 | 1.876 | 0.117 |
| Mean | Stdev |
14_O6-19_H41-14 | 1.970 | 0.174 |
| Mean | Stdev |
15_H1-18_N3-15 | 1.966 | 0.097 |
| Mean | Stdev |
15_H21-18_O2-15 | 1.902 | 0.131 |
| Mean | Stdev |
15_O6-18_H41-15 | 1.956 | 0.154 |
| Mean | Stdev |
16_H41-17_O6-16 | 1.996 | 0.361 |
| Mean | Stdev |
16_N3-17_H1-16 | 2.005 | 0.273 |
| Mean | Stdev |
16_O2-17_H21-16 | 1.921 | 0.268 |
| Mean | Stdev |
2_H1-31_N3-2 | 1.967 | 0.092 |
| Mean | Stdev |
2_H21-31_O2-2 | 1.903 | 0.134 |
| Mean | Stdev |
2_O6-31_H41-2 | 1.935 | 0.143 |
| Mean | Stdev |
3_H41-30_O6-3 | 1.960 | 0.160 |
| Mean | Stdev |
3_N3-30_H1-3 | 1.975 | 0.095 |
| Mean | Stdev |
3_O2-30_H21-3 | 1.893 | 0.120 |
| Mean | Stdev |
4_H61-29_O4-4 | 2.070 | 0.529 |
| Mean | Stdev |
4_N1-29_H3-4 | 2.053 | 0.492 |
| Mean | Stdev |
5_H61-28_O4-5 | 2.014 | 0.198 |
| Mean | Stdev |
5_N1-28_H3-5 | 1.951 | 0.110 |
| Mean | Stdev |
6_H1-27_N3-6 | 1.953 | 0.089 |
| Mean | Stdev |
6_H21-27_O2-6 | 1.887 | 0.122 |
| Mean | Stdev |
6_O6-27_H41-6 | 1.977 | 0.164 |
| Mean | Stdev |
7_H41-26_O6-7 | 1.996 | 0.179 |
| Mean | Stdev |
7_N3-26_H1-7 | 1.967 | 0.097 |
| Mean | Stdev |
7_O2-26_H21-7 | 1.896 | 0.124 |
| Mean | Stdev |
8_H3-25_N1-8 | 1.965 | 0.120 |
| Mean | Stdev |
8_O4-25_H61-8 | 2.029 | 0.225 |
| Mean | Stdev |
9_H61-24_O4-9 | 2.026 | 0.220 |
| Mean | Stdev |
9_N1-24_H3-9 | 1.965 | 0.119 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-32 | 3.8122 | 2.6739 |
1 | N3-H1_1-32 | 3.5034 | 2.3589 |
1 | O2-H21_1-32 | 3.3674 | 2.3169 |
2 | O6-H41_2-31 | 1.9355 | 0.1428 |
2 | H1-N3_2-31 | 1.9673 | 0.0917 |
2 | H21-O2_2-31 | 1.9026 | 0.1338 |
3 | H41-O6_3-30 | 1.9602 | 0.1600 |
3 | N3-H1_3-30 | 1.9752 | 0.0954 |
3 | O2-H21_3-30 | 1.8926 | 0.1198 |
4 | N1-H3_4-29 | 2.0532 | 0.4919 |
4 | H61-O4_4-29 | 2.0700 | 0.5289 |
5 | N1-H3_5-28 | 1.9513 | 0.1104 |
5 | H61-O4_5-28 | 2.0138 | 0.1977 |
6 | O6-H41_6-27 | 1.9773 | 0.1643 |
6 | H1-N3_6-27 | 1.9534 | 0.0889 |
6 | H21-O2_6-27 | 1.8874 | 0.1217 |
7 | H41-O6_7-26 | 1.9964 | 0.1790 |
7 | N3-H1_7-26 | 1.9668 | 0.0972 |
7 | O2-H21_7-26 | 1.8956 | 0.1241 |
8 | H3-N1_8-25 | 1.9651 | 0.1203 |
8 | O4-H61_8-25 | 2.0290 | 0.2251 |
9 | N1-H3_9-24 | 1.9653 | 0.1194 |
9 | H61-O4_9-24 | 2.0265 | 0.2196 |
10 | O6-H41_10-23 | 1.9981 | 0.1788 |
10 | H1-N3_10-23 | 1.9682 | 0.0949 |
10 | H21-O2_10-23 | 1.8985 | 0.1246 |
11 | H41-O6_11-22 | 1.9754 | 0.1685 |
11 | N3-H1_11-22 | 1.9532 | 0.0921 |
11 | O2-H21_11-22 | 1.8873 | 0.1193 |
12 | H3-N1_12-21 | 1.9556 | 0.1113 |
12 | O4-H61_12-21 | 2.0026 | 0.1827 |
13 | H3-N1_13-20 | 1.9718 | 0.1215 |
13 | O4-H61_13-20 | 2.0000 | 0.1952 |
14 | O6-H41_14-19 | 1.9701 | 0.1743 |
14 | H1-N3_14-19 | 1.9664 | 0.0987 |
14 | H21-O2_14-19 | 1.8762 | 0.1173 |
15 | O6-H41_15-18 | 1.9559 | 0.1545 |
15 | H1-N3_15-18 | 1.9660 | 0.0965 |
15 | H21-O2_15-18 | 1.9021 | 0.1309 |
16 | H41-O6_16-17 | 1.9962 | 0.3609 |
16 | N3-H1_16-17 | 2.0054 | 0.2732 |
16 | O2-H21_16-17 | 1.9212 | 0.2680 |