Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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5' |
C |
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G |
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C |
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G |
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A |
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A |
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T |
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T |
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C |
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G |
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C |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
- |
C |
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G |
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C |
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T |
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T |
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A |
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A |
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G |
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C |
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G |
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C |
5' |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 4.073 | 3.244 |
| Mean | Stdev |
1_N3-24_H1-1 | 3.928 | 3.060 |
| Mean | Stdev |
1_O2-24_H21-1 | 3.773 | 2.931 |
| Mean | Stdev |
10_H1-15_N3-10 | 1.974 | 0.093 |
| Mean | Stdev |
10_H21-15_O2-10 | 1.897 | 0.128 |
| Mean | Stdev |
10_O6-15_H41-10 | 1.950 | 0.152 |
| Mean | Stdev |
11_H41-14_O6-11 | 1.947 | 0.162 |
| Mean | Stdev |
11_N3-14_H1-11 | 1.968 | 0.096 |
| Mean | Stdev |
11_O2-14_H21-11 | 1.893 | 0.126 |
| Mean | Stdev |
12_H1-13_N3-12 | 3.014 | 2.387 |
| Mean | Stdev |
12_H21-13_O2-12 | 2.975 | 2.443 |
| Mean | Stdev |
12_O6-13_H41-12 | 3.114 | 2.485 |
| Mean | Stdev |
2_H1-23_N3-2 | 1.973 | 0.095 |
| Mean | Stdev |
2_H21-23_O2-2 | 1.894 | 0.127 |
| Mean | Stdev |
2_O6-23_H41-2 | 1.945 | 0.157 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.955 | 0.157 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.976 | 0.092 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.897 | 0.125 |
| Mean | Stdev |
4_H1-21_N3-4 | 1.968 | 0.103 |
| Mean | Stdev |
4_H21-21_O2-4 | 1.881 | 0.121 |
| Mean | Stdev |
4_O6-21_H41-4 | 1.974 | 0.188 |
| Mean | Stdev |
5_H61-20_O4-5 | 1.981 | 0.186 |
| Mean | Stdev |
5_N1-20_H3-5 | 1.990 | 0.127 |
| Mean | Stdev |
6_H61-19_O4-6 | 2.014 | 0.192 |
| Mean | Stdev |
6_N1-19_H3-6 | 1.971 | 0.115 |
| Mean | Stdev |
7_H3-18_N1-7 | 1.976 | 0.121 |
| Mean | Stdev |
7_O4-18_H61-7 | 2.013 | 0.188 |
| Mean | Stdev |
8_H3-17_N1-8 | 1.989 | 0.126 |
| Mean | Stdev |
8_O4-17_H61-8 | 1.983 | 0.188 |
| Mean | Stdev |
9_H41-16_O6-9 | 1.972 | 0.206 |
| Mean | Stdev |
9_N3-16_H1-9 | 1.968 | 0.111 |
| Mean | Stdev |
9_O2-16_H21-9 | 1.885 | 0.130 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 4.0731 | 3.2441 |
1 | N3-H1_1-24 | 3.9275 | 3.0601 |
1 | O2-H21_1-24 | 3.7734 | 2.9310 |
2 | O6-H41_2-23 | 1.9452 | 0.1567 |
2 | H1-N3_2-23 | 1.9728 | 0.0951 |
2 | H21-O2_2-23 | 1.8942 | 0.1270 |
3 | H41-O6_3-22 | 1.9554 | 0.1565 |
3 | N3-H1_3-22 | 1.9756 | 0.0925 |
3 | O2-H21_3-22 | 1.8975 | 0.1251 |
4 | O6-H41_4-21 | 1.9738 | 0.1881 |
4 | H1-N3_4-21 | 1.9675 | 0.1029 |
4 | H21-O2_4-21 | 1.8809 | 0.1215 |
5 | N1-H3_5-20 | 1.9905 | 0.1265 |
5 | H61-O4_5-20 | 1.9806 | 0.1860 |
6 | N1-H3_6-19 | 1.9707 | 0.1150 |
6 | H61-O4_6-19 | 2.0141 | 0.1917 |
7 | H3-N1_7-18 | 1.9763 | 0.1211 |
7 | O4-H61_7-18 | 2.0129 | 0.1875 |
8 | H3-N1_8-17 | 1.9887 | 0.1260 |
8 | O4-H61_8-17 | 1.9834 | 0.1880 |
9 | H41-O6_9-16 | 1.9716 | 0.2060 |
9 | N3-H1_9-16 | 1.9684 | 0.1112 |
9 | O2-H21_9-16 | 1.8852 | 0.1296 |
10 | O6-H41_10-15 | 1.9497 | 0.1524 |
10 | H1-N3_10-15 | 1.9743 | 0.0933 |
10 | H21-O2_10-15 | 1.8973 | 0.1279 |
11 | H41-O6_11-14 | 1.9467 | 0.1617 |
11 | N3-H1_11-14 | 1.9684 | 0.0957 |
11 | O2-H21_11-14 | 1.8925 | 0.1258 |
12 | O6-H41_12-13 | 3.1142 | 2.4850 |
12 | H1-N3_12-13 | 3.0140 | 2.3871 |
12 | H21-O2_12-13 | 2.9746 | 2.4428 |