Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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5' |
C |
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G |
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C |
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G |
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A |
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A |
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T |
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T |
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C |
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G |
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C |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
- |
C |
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G |
- |
C |
- |
T |
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T |
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A |
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A |
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G |
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C |
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G |
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C |
5' |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 2.330 | 1.394 |
| Mean | Stdev |
1_N3-24_H1-1 | 2.261 | 1.313 |
| Mean | Stdev |
1_O2-24_H21-1 | 2.208 | 1.341 |
| Mean | Stdev |
10_H1-15_N3-10 | 1.972 | 0.091 |
| Mean | Stdev |
10_H21-15_O2-10 | 1.896 | 0.122 |
| Mean | Stdev |
10_O6-15_H41-10 | 1.947 | 0.149 |
| Mean | Stdev |
11_H41-14_O6-11 | 1.941 | 0.144 |
| Mean | Stdev |
11_N3-14_H1-11 | 1.964 | 0.092 |
| Mean | Stdev |
11_O2-14_H21-11 | 1.892 | 0.124 |
| Mean | Stdev |
12_H1-13_N3-12 | 2.587 | 1.656 |
| Mean | Stdev |
12_H21-13_O2-12 | 2.504 | 1.621 |
| Mean | Stdev |
12_O6-13_H41-12 | 2.732 | 1.890 |
| Mean | Stdev |
2_H1-23_N3-2 | 1.965 | 0.091 |
| Mean | Stdev |
2_H21-23_O2-2 | 1.891 | 0.126 |
| Mean | Stdev |
2_O6-23_H41-2 | 1.939 | 0.143 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.955 | 0.154 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.975 | 0.092 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.899 | 0.124 |
| Mean | Stdev |
4_H1-21_N3-4 | 1.966 | 0.093 |
| Mean | Stdev |
4_H21-21_O2-4 | 1.883 | 0.120 |
| Mean | Stdev |
4_O6-21_H41-4 | 1.970 | 0.167 |
| Mean | Stdev |
5_H61-20_O4-5 | 1.980 | 0.183 |
| Mean | Stdev |
5_N1-20_H3-5 | 1.993 | 0.128 |
| Mean | Stdev |
6_H61-19_O4-6 | 2.011 | 0.183 |
| Mean | Stdev |
6_N1-19_H3-6 | 1.978 | 0.120 |
| Mean | Stdev |
7_H3-18_N1-7 | 1.970 | 0.118 |
| Mean | Stdev |
7_O4-18_H61-7 | 2.023 | 0.202 |
| Mean | Stdev |
8_H3-17_N1-8 | 1.988 | 0.127 |
| Mean | Stdev |
8_O4-17_H61-8 | 1.990 | 0.194 |
| Mean | Stdev |
9_H41-16_O6-9 | 1.971 | 0.169 |
| Mean | Stdev |
9_N3-16_H1-9 | 1.967 | 0.093 |
| Mean | Stdev |
9_O2-16_H21-9 | 1.883 | 0.123 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 2.3303 | 1.3938 |
1 | N3-H1_1-24 | 2.2611 | 1.3132 |
1 | O2-H21_1-24 | 2.2084 | 1.3410 |
2 | O6-H41_2-23 | 1.9386 | 0.1435 |
2 | H1-N3_2-23 | 1.9650 | 0.0913 |
2 | H21-O2_2-23 | 1.8906 | 0.1258 |
3 | H41-O6_3-22 | 1.9549 | 0.1541 |
3 | N3-H1_3-22 | 1.9752 | 0.0919 |
3 | O2-H21_3-22 | 1.8988 | 0.1236 |
4 | O6-H41_4-21 | 1.9705 | 0.1666 |
4 | H1-N3_4-21 | 1.9662 | 0.0932 |
4 | H21-O2_4-21 | 1.8834 | 0.1196 |
5 | N1-H3_5-20 | 1.9926 | 0.1278 |
5 | H61-O4_5-20 | 1.9795 | 0.1826 |
6 | N1-H3_6-19 | 1.9780 | 0.1201 |
6 | H61-O4_6-19 | 2.0110 | 0.1829 |
7 | H3-N1_7-18 | 1.9698 | 0.1181 |
7 | O4-H61_7-18 | 2.0230 | 0.2016 |
8 | H3-N1_8-17 | 1.9877 | 0.1273 |
8 | O4-H61_8-17 | 1.9899 | 0.1941 |
9 | H41-O6_9-16 | 1.9713 | 0.1691 |
9 | N3-H1_9-16 | 1.9670 | 0.0935 |
9 | O2-H21_9-16 | 1.8828 | 0.1232 |
10 | O6-H41_10-15 | 1.9474 | 0.1495 |
10 | H1-N3_10-15 | 1.9722 | 0.0912 |
10 | H21-O2_10-15 | 1.8960 | 0.1222 |
11 | H41-O6_11-14 | 1.9413 | 0.1437 |
11 | N3-H1_11-14 | 1.9644 | 0.0923 |
11 | O2-H21_11-14 | 1.8918 | 0.1241 |
12 | O6-H41_12-13 | 2.7321 | 1.8904 |
12 | H1-N3_12-13 | 2.5874 | 1.6564 |
12 | H21-O2_12-13 | 2.5037 | 1.6212 |