Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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5' |
C |
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G |
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C |
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G |
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A |
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A |
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T |
- |
T |
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C |
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G |
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C |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
- |
C |
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G |
- |
C |
- |
T |
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T |
- |
A |
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A |
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G |
- |
C |
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G |
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C |
5' |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 4.264 | 2.402 |
| Mean | Stdev |
1_N3-24_H1-1 | 3.731 | 1.865 |
| Mean | Stdev |
1_O2-24_H21-1 | 3.497 | 1.686 |
| Mean | Stdev |
10_H1-15_N3-10 | 1.973 | 0.093 |
| Mean | Stdev |
10_H21-15_O2-10 | 1.897 | 0.123 |
| Mean | Stdev |
10_O6-15_H41-10 | 1.940 | 0.145 |
| Mean | Stdev |
11_H41-14_O6-11 | 1.934 | 0.137 |
| Mean | Stdev |
11_N3-14_H1-11 | 1.961 | 0.088 |
| Mean | Stdev |
11_O2-14_H21-11 | 1.886 | 0.122 |
| Mean | Stdev |
12_H1-13_N3-12 | 1.975 | 0.106 |
| Mean | Stdev |
12_H21-13_O2-12 | 1.916 | 0.143 |
| Mean | Stdev |
12_O6-13_H41-12 | 2.007 | 0.205 |
| Mean | Stdev |
2_H1-23_N3-2 | 1.965 | 0.091 |
| Mean | Stdev |
2_H21-23_O2-2 | 1.890 | 0.126 |
| Mean | Stdev |
2_O6-23_H41-2 | 1.935 | 0.137 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.950 | 0.155 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.971 | 0.091 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.889 | 0.120 |
| Mean | Stdev |
4_H1-21_N3-4 | 1.969 | 0.092 |
| Mean | Stdev |
4_H21-21_O2-4 | 1.886 | 0.125 |
| Mean | Stdev |
4_O6-21_H41-4 | 1.965 | 0.158 |
| Mean | Stdev |
5_H61-20_O4-5 | 1.968 | 0.174 |
| Mean | Stdev |
5_N1-20_H3-5 | 1.998 | 0.133 |
| Mean | Stdev |
6_H61-19_O4-6 | 2.015 | 0.192 |
| Mean | Stdev |
6_N1-19_H3-6 | 1.975 | 0.118 |
| Mean | Stdev |
7_H3-18_N1-7 | 1.976 | 0.121 |
| Mean | Stdev |
7_O4-18_H61-7 | 2.013 | 0.195 |
| Mean | Stdev |
8_H3-17_N1-8 | 1.998 | 0.129 |
| Mean | Stdev |
8_O4-17_H61-8 | 1.975 | 0.176 |
| Mean | Stdev |
9_H41-16_O6-9 | 1.965 | 0.157 |
| Mean | Stdev |
9_N3-16_H1-9 | 1.963 | 0.090 |
| Mean | Stdev |
9_O2-16_H21-9 | 1.873 | 0.114 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 4.2639 | 2.4024 |
1 | N3-H1_1-24 | 3.7305 | 1.8653 |
1 | O2-H21_1-24 | 3.4966 | 1.6862 |
2 | O6-H41_2-23 | 1.9350 | 0.1369 |
2 | H1-N3_2-23 | 1.9654 | 0.0907 |
2 | H21-O2_2-23 | 1.8902 | 0.1258 |
3 | H41-O6_3-22 | 1.9502 | 0.1549 |
3 | N3-H1_3-22 | 1.9706 | 0.0911 |
3 | O2-H21_3-22 | 1.8894 | 0.1201 |
4 | O6-H41_4-21 | 1.9654 | 0.1581 |
4 | H1-N3_4-21 | 1.9691 | 0.0917 |
4 | H21-O2_4-21 | 1.8859 | 0.1253 |
5 | N1-H3_5-20 | 1.9976 | 0.1328 |
5 | H61-O4_5-20 | 1.9684 | 0.1744 |
6 | N1-H3_6-19 | 1.9748 | 0.1176 |
6 | H61-O4_6-19 | 2.0150 | 0.1916 |
7 | H3-N1_7-18 | 1.9759 | 0.1214 |
7 | O4-H61_7-18 | 2.0126 | 0.1950 |
8 | H3-N1_8-17 | 1.9980 | 0.1288 |
8 | O4-H61_8-17 | 1.9751 | 0.1757 |
9 | H41-O6_9-16 | 1.9654 | 0.1568 |
9 | N3-H1_9-16 | 1.9633 | 0.0896 |
9 | O2-H21_9-16 | 1.8729 | 0.1138 |
10 | O6-H41_10-15 | 1.9403 | 0.1450 |
10 | H1-N3_10-15 | 1.9726 | 0.0934 |
10 | H21-O2_10-15 | 1.8968 | 0.1233 |
11 | H41-O6_11-14 | 1.9337 | 0.1372 |
11 | N3-H1_11-14 | 1.9614 | 0.0883 |
11 | O2-H21_11-14 | 1.8859 | 0.1225 |
12 | O6-H41_12-13 | 2.0072 | 0.2048 |
12 | H1-N3_12-13 | 1.9750 | 0.1063 |
12 | H21-O2_12-13 | 1.9157 | 0.1431 |