Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
|
1 |
|
2 |
|
3 |
|
4 |
|
5 |
|
6 |
|
7 |
|
8 |
|
9 |
|
10 |
|
11 |
|
12 |
|
5' |
C |
- |
G |
- |
C |
- |
G |
- |
A |
- |
A |
- |
T |
- |
T |
- |
C |
- |
G |
- |
C |
- |
G |
3' |
|
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
3' |
G |
- |
C |
- |
G |
- |
C |
- |
T |
- |
T |
- |
A |
- |
A |
- |
G |
- |
C |
- |
G |
- |
C |
5' |
|
24 |
|
23 |
|
22 |
|
21 |
|
20 |
|
19 |
|
18 |
|
17 |
|
16 |
|
15 |
|
14 |
|
13 |
|
Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 8.324 | 1.211 |
| Mean | Stdev |
1_N3-24_H1-1 | 8.233 | 1.188 |
| Mean | Stdev |
1_O2-24_H21-1 | 8.361 | 1.289 |
| Mean | Stdev |
10_H1-15_N3-10 | 1.969 | 0.089 |
| Mean | Stdev |
10_H21-15_O2-10 | 1.899 | 0.125 |
| Mean | Stdev |
10_O6-15_H41-10 | 1.933 | 0.137 |
| Mean | Stdev |
11_H41-14_O6-11 | 1.941 | 0.143 |
| Mean | Stdev |
11_N3-14_H1-11 | 1.960 | 0.087 |
| Mean | Stdev |
11_O2-14_H21-11 | 1.879 | 0.119 |
| Mean | Stdev |
12_H1-13_N3-12 | 1.978 | 0.108 |
| Mean | Stdev |
12_H21-13_O2-12 | 1.926 | 0.148 |
| Mean | Stdev |
12_O6-13_H41-12 | 2.004 | 0.209 |
| Mean | Stdev |
2_H1-23_N3-2 | 1.983 | 0.099 |
| Mean | Stdev |
2_H21-23_O2-2 | 1.901 | 0.135 |
| Mean | Stdev |
2_O6-23_H41-2 | 1.945 | 0.155 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.978 | 0.174 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.989 | 0.101 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.911 | 0.127 |
| Mean | Stdev |
4_H1-21_N3-4 | 1.968 | 0.090 |
| Mean | Stdev |
4_H21-21_O2-4 | 1.890 | 0.119 |
| Mean | Stdev |
4_O6-21_H41-4 | 1.938 | 0.141 |
| Mean | Stdev |
5_H61-20_O4-5 | 1.962 | 0.164 |
| Mean | Stdev |
5_N1-20_H3-5 | 1.982 | 0.122 |
| Mean | Stdev |
6_H61-19_O4-6 | 2.017 | 0.195 |
| Mean | Stdev |
6_N1-19_H3-6 | 1.968 | 0.119 |
| Mean | Stdev |
7_H3-18_N1-7 | 1.977 | 0.123 |
| Mean | Stdev |
7_O4-18_H61-7 | 2.042 | 0.213 |
| Mean | Stdev |
8_H3-17_N1-8 | 2.010 | 0.143 |
| Mean | Stdev |
8_O4-17_H61-8 | 1.974 | 0.182 |
| Mean | Stdev |
9_H41-16_O6-9 | 1.957 | 0.156 |
| Mean | Stdev |
9_N3-16_H1-9 | 1.960 | 0.091 |
| Mean | Stdev |
9_O2-16_H21-9 | 1.883 | 0.120 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 8.3242 | 1.2106 |
1 | N3-H1_1-24 | 8.2328 | 1.1881 |
1 | O2-H21_1-24 | 8.3614 | 1.2890 |
2 | O6-H41_2-23 | 1.9454 | 0.1553 |
2 | H1-N3_2-23 | 1.9831 | 0.0992 |
2 | H21-O2_2-23 | 1.9014 | 0.1351 |
3 | H41-O6_3-22 | 1.9775 | 0.1743 |
3 | N3-H1_3-22 | 1.9892 | 0.1014 |
3 | O2-H21_3-22 | 1.9113 | 0.1265 |
4 | O6-H41_4-21 | 1.9380 | 0.1414 |
4 | H1-N3_4-21 | 1.9675 | 0.0900 |
4 | H21-O2_4-21 | 1.8896 | 0.1195 |
5 | N1-H3_5-20 | 1.9823 | 0.1216 |
5 | H61-O4_5-20 | 1.9616 | 0.1636 |
6 | N1-H3_6-19 | 1.9682 | 0.1194 |
6 | H61-O4_6-19 | 2.0173 | 0.1945 |
7 | H3-N1_7-18 | 1.9771 | 0.1234 |
7 | O4-H61_7-18 | 2.0415 | 0.2134 |
8 | H3-N1_8-17 | 2.0100 | 0.1426 |
8 | O4-H61_8-17 | 1.9742 | 0.1819 |
9 | H41-O6_9-16 | 1.9567 | 0.1559 |
9 | N3-H1_9-16 | 1.9602 | 0.0907 |
9 | O2-H21_9-16 | 1.8827 | 0.1202 |
10 | O6-H41_10-15 | 1.9330 | 0.1365 |
10 | H1-N3_10-15 | 1.9689 | 0.0892 |
10 | H21-O2_10-15 | 1.8995 | 0.1247 |
11 | H41-O6_11-14 | 1.9412 | 0.1428 |
11 | N3-H1_11-14 | 1.9603 | 0.0869 |
11 | O2-H21_11-14 | 1.8792 | 0.1187 |
12 | O6-H41_12-13 | 2.0037 | 0.2087 |
12 | H1-N3_12-13 | 1.9781 | 0.1084 |
12 | H21-O2_12-13 | 1.9261 | 0.1484 |