Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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5' |
C |
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G |
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C |
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G |
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A |
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A |
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T |
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T |
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C |
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G |
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C |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
- |
C |
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G |
- |
C |
- |
T |
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T |
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A |
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A |
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G |
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C |
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G |
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C |
5' |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 3.780 | 3.036 |
| Mean | Stdev |
1_N3-24_H1-1 | 3.653 | 2.873 |
| Mean | Stdev |
1_O2-24_H21-1 | 3.607 | 2.901 |
| Mean | Stdev |
10_H1-15_N3-10 | 1.976 | 0.093 |
| Mean | Stdev |
10_H21-15_O2-10 | 1.899 | 0.123 |
| Mean | Stdev |
10_O6-15_H41-10 | 1.957 | 0.159 |
| Mean | Stdev |
11_H41-14_O6-11 | 1.943 | 0.147 |
| Mean | Stdev |
11_N3-14_H1-11 | 1.967 | 0.094 |
| Mean | Stdev |
11_O2-14_H21-11 | 1.892 | 0.123 |
| Mean | Stdev |
12_H1-13_N3-12 | 2.759 | 2.109 |
| Mean | Stdev |
12_H21-13_O2-12 | 2.660 | 1.985 |
| Mean | Stdev |
12_O6-13_H41-12 | 2.929 | 2.433 |
| Mean | Stdev |
2_H1-23_N3-2 | 1.972 | 0.096 |
| Mean | Stdev |
2_H21-23_O2-2 | 1.896 | 0.130 |
| Mean | Stdev |
2_O6-23_H41-2 | 1.950 | 0.160 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.955 | 0.153 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.975 | 0.092 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.900 | 0.125 |
| Mean | Stdev |
4_H1-21_N3-4 | 1.964 | 0.092 |
| Mean | Stdev |
4_H21-21_O2-4 | 1.883 | 0.118 |
| Mean | Stdev |
4_O6-21_H41-4 | 1.972 | 0.166 |
| Mean | Stdev |
5_H61-20_O4-5 | 1.987 | 0.194 |
| Mean | Stdev |
5_N1-20_H3-5 | 1.996 | 0.132 |
| Mean | Stdev |
6_H61-19_O4-6 | 2.019 | 0.197 |
| Mean | Stdev |
6_N1-19_H3-6 | 1.971 | 0.115 |
| Mean | Stdev |
7_H3-18_N1-7 | 1.973 | 0.117 |
| Mean | Stdev |
7_O4-18_H61-7 | 2.018 | 0.196 |
| Mean | Stdev |
8_H3-17_N1-8 | 1.994 | 0.128 |
| Mean | Stdev |
8_O4-17_H61-8 | 1.978 | 0.186 |
| Mean | Stdev |
9_H41-16_O6-9 | 1.968 | 0.192 |
| Mean | Stdev |
9_N3-16_H1-9 | 1.966 | 0.100 |
| Mean | Stdev |
9_O2-16_H21-9 | 1.883 | 0.123 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 3.7795 | 3.0361 |
1 | N3-H1_1-24 | 3.6528 | 2.8731 |
1 | O2-H21_1-24 | 3.6073 | 2.9014 |
2 | O6-H41_2-23 | 1.9499 | 0.1600 |
2 | H1-N3_2-23 | 1.9720 | 0.0957 |
2 | H21-O2_2-23 | 1.8963 | 0.1300 |
3 | H41-O6_3-22 | 1.9547 | 0.1530 |
3 | N3-H1_3-22 | 1.9753 | 0.0921 |
3 | O2-H21_3-22 | 1.9000 | 0.1249 |
4 | O6-H41_4-21 | 1.9722 | 0.1659 |
4 | H1-N3_4-21 | 1.9636 | 0.0920 |
4 | H21-O2_4-21 | 1.8831 | 0.1183 |
5 | N1-H3_5-20 | 1.9956 | 0.1315 |
5 | H61-O4_5-20 | 1.9870 | 0.1935 |
6 | N1-H3_6-19 | 1.9710 | 0.1147 |
6 | H61-O4_6-19 | 2.0190 | 0.1970 |
7 | H3-N1_7-18 | 1.9730 | 0.1173 |
7 | O4-H61_7-18 | 2.0176 | 0.1959 |
8 | H3-N1_8-17 | 1.9936 | 0.1280 |
8 | O4-H61_8-17 | 1.9779 | 0.1857 |
9 | H41-O6_9-16 | 1.9683 | 0.1916 |
9 | N3-H1_9-16 | 1.9656 | 0.1002 |
9 | O2-H21_9-16 | 1.8834 | 0.1227 |
10 | O6-H41_10-15 | 1.9572 | 0.1586 |
10 | H1-N3_10-15 | 1.9756 | 0.0929 |
10 | H21-O2_10-15 | 1.8988 | 0.1233 |
11 | H41-O6_11-14 | 1.9427 | 0.1467 |
11 | N3-H1_11-14 | 1.9672 | 0.0937 |
11 | O2-H21_11-14 | 1.8917 | 0.1230 |
12 | O6-H41_12-13 | 2.9294 | 2.4329 |
12 | H1-N3_12-13 | 2.7589 | 2.1090 |
12 | H21-O2_12-13 | 2.6600 | 1.9854 |