Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
|
1 |
|
2 |
|
3 |
|
4 |
|
5 |
|
6 |
|
7 |
|
8 |
|
9 |
|
10 |
|
11 |
|
12 |
|
5' |
C |
- |
G |
- |
C |
- |
G |
- |
A |
- |
A |
- |
T |
- |
T |
- |
C |
- |
G |
- |
C |
- |
G |
3' |
|
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
3' |
G |
- |
C |
- |
G |
- |
C |
- |
T |
- |
T |
- |
A |
- |
A |
- |
G |
- |
C |
- |
G |
- |
C |
5' |
|
24 |
|
23 |
|
22 |
|
21 |
|
20 |
|
19 |
|
18 |
|
17 |
|
16 |
|
15 |
|
14 |
|
13 |
|
Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 4.286 | 3.229 |
| Mean | Stdev |
1_N3-24_H1-1 | 4.197 | 3.146 |
| Mean | Stdev |
1_O2-24_H21-1 | 4.237 | 3.380 |
| Mean | Stdev |
10_H1-15_N3-10 | 1.972 | 0.096 |
| Mean | Stdev |
10_H21-15_O2-10 | 1.897 | 0.125 |
| Mean | Stdev |
10_O6-15_H41-10 | 1.946 | 0.153 |
| Mean | Stdev |
11_H41-14_O6-11 | 1.955 | 0.169 |
| Mean | Stdev |
11_N3-14_H1-11 | 1.972 | 0.099 |
| Mean | Stdev |
11_O2-14_H21-11 | 1.895 | 0.135 |
| Mean | Stdev |
12_H1-13_N3-12 | 4.891 | 4.268 |
| Mean | Stdev |
12_H21-13_O2-12 | 4.955 | 4.472 |
| Mean | Stdev |
12_O6-13_H41-12 | 4.977 | 4.381 |
| Mean | Stdev |
2_H1-23_N3-2 | 2.003 | 0.485 |
| Mean | Stdev |
2_H21-23_O2-2 | 1.934 | 0.568 |
| Mean | Stdev |
2_O6-23_H41-2 | 1.976 | 0.507 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.948 | 0.159 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.978 | 0.097 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.908 | 0.132 |
| Mean | Stdev |
4_H1-21_N3-4 | 1.966 | 0.101 |
| Mean | Stdev |
4_H21-21_O2-4 | 1.881 | 0.127 |
| Mean | Stdev |
4_O6-21_H41-4 | 1.973 | 0.189 |
| Mean | Stdev |
5_H61-20_O4-5 | 1.980 | 0.178 |
| Mean | Stdev |
5_N1-20_H3-5 | 1.993 | 0.131 |
| Mean | Stdev |
6_H61-19_O4-6 | 2.014 | 0.192 |
| Mean | Stdev |
6_N1-19_H3-6 | 1.972 | 0.117 |
| Mean | Stdev |
7_H3-18_N1-7 | 1.973 | 0.114 |
| Mean | Stdev |
7_O4-18_H61-7 | 2.010 | 0.185 |
| Mean | Stdev |
8_H3-17_N1-8 | 1.990 | 0.129 |
| Mean | Stdev |
8_O4-17_H61-8 | 1.984 | 0.183 |
| Mean | Stdev |
9_H41-16_O6-9 | 1.993 | 0.217 |
| Mean | Stdev |
9_N3-16_H1-9 | 1.973 | 0.112 |
| Mean | Stdev |
9_O2-16_H21-9 | 1.876 | 0.123 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 4.2864 | 3.2288 |
1 | N3-H1_1-24 | 4.1969 | 3.1464 |
1 | O2-H21_1-24 | 4.2366 | 3.3796 |
2 | O6-H41_2-23 | 1.9759 | 0.5070 |
2 | H1-N3_2-23 | 2.0027 | 0.4849 |
2 | H21-O2_2-23 | 1.9336 | 0.5684 |
3 | H41-O6_3-22 | 1.9484 | 0.1590 |
3 | N3-H1_3-22 | 1.9775 | 0.0974 |
3 | O2-H21_3-22 | 1.9076 | 0.1321 |
4 | O6-H41_4-21 | 1.9728 | 0.1890 |
4 | H1-N3_4-21 | 1.9657 | 0.1014 |
4 | H21-O2_4-21 | 1.8811 | 0.1265 |
5 | N1-H3_5-20 | 1.9928 | 0.1306 |
5 | H61-O4_5-20 | 1.9803 | 0.1781 |
6 | N1-H3_6-19 | 1.9717 | 0.1170 |
6 | H61-O4_6-19 | 2.0137 | 0.1920 |
7 | H3-N1_7-18 | 1.9730 | 0.1139 |
7 | O4-H61_7-18 | 2.0103 | 0.1850 |
8 | H3-N1_8-17 | 1.9898 | 0.1290 |
8 | O4-H61_8-17 | 1.9844 | 0.1833 |
9 | H41-O6_9-16 | 1.9926 | 0.2169 |
9 | N3-H1_9-16 | 1.9727 | 0.1119 |
9 | O2-H21_9-16 | 1.8757 | 0.1226 |
10 | O6-H41_10-15 | 1.9459 | 0.1530 |
10 | H1-N3_10-15 | 1.9720 | 0.0959 |
10 | H21-O2_10-15 | 1.8975 | 0.1246 |
11 | H41-O6_11-14 | 1.9549 | 0.1687 |
11 | N3-H1_11-14 | 1.9715 | 0.0989 |
11 | O2-H21_11-14 | 1.8955 | 0.1347 |
12 | O6-H41_12-13 | 4.9769 | 4.3811 |
12 | H1-N3_12-13 | 4.8911 | 4.2677 |
12 | H21-O2_12-13 | 4.9551 | 4.4718 |