Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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17 |
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18 |
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5' |
G |
- |
C |
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G |
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C |
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G |
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G |
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G |
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C |
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G |
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G |
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G |
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C |
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G |
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G |
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G |
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C |
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G |
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C |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
C |
- |
G |
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C |
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G |
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C |
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C |
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C |
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G |
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C |
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C |
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C |
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G |
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C |
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C |
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C |
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G |
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C |
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G |
5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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Interactive Sequence (see Help)
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| Mean | Stdev |
1_H1-36_N3-1 | 2.268 | 1.232 |
| Mean | Stdev |
1_H21-36_O2-1 | 2.164 | 1.368 |
| Mean | Stdev |
1_O6-36_H41-1 | 2.490 | 1.815 |
| Mean | Stdev |
10_H1-27_N3-10 | 1.964 | 0.095 |
| Mean | Stdev |
10_H21-27_O2-10 | 1.908 | 0.129 |
| Mean | Stdev |
10_O6-27_H41-10 | 1.958 | 0.166 |
| Mean | Stdev |
11_H1-26_N3-11 | 1.962 | 0.091 |
| Mean | Stdev |
11_H21-26_O2-11 | 1.904 | 0.125 |
| Mean | Stdev |
11_O6-26_H41-11 | 1.943 | 0.147 |
| Mean | Stdev |
12_H41-25_O6-12 | 1.970 | 0.168 |
| Mean | Stdev |
12_N3-25_H1-12 | 1.966 | 0.095 |
| Mean | Stdev |
12_O2-25_H21-12 | 1.889 | 0.121 |
| Mean | Stdev |
13_H1-24_N3-13 | 1.967 | 0.095 |
| Mean | Stdev |
13_H21-24_O2-13 | 1.890 | 0.127 |
| Mean | Stdev |
13_O6-24_H41-13 | 1.961 | 0.162 |
| Mean | Stdev |
14_H1-23_N3-14 | 1.964 | 0.094 |
| Mean | Stdev |
14_H21-23_O2-14 | 1.900 | 0.125 |
| Mean | Stdev |
14_O6-23_H41-14 | 1.957 | 0.166 |
| Mean | Stdev |
15_H1-22_N3-15 | 1.964 | 0.092 |
| Mean | Stdev |
15_H21-22_O2-15 | 1.899 | 0.128 |
| Mean | Stdev |
15_O6-22_H41-15 | 1.952 | 0.151 |
| Mean | Stdev |
16_H41-21_O6-16 | 1.957 | 0.159 |
| Mean | Stdev |
16_N3-21_H1-16 | 1.965 | 0.091 |
| Mean | Stdev |
16_O2-21_H21-16 | 1.896 | 0.125 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.968 | 0.097 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.890 | 0.122 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.953 | 0.163 |
| Mean | Stdev |
18_H41-19_O6-18 | 1.979 | 0.210 |
| Mean | Stdev |
18_N3-19_H1-18 | 2.002 | 0.129 |
| Mean | Stdev |
18_O2-19_H21-18 | 1.924 | 0.156 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.955 | 0.157 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.964 | 0.089 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.893 | 0.121 |
| Mean | Stdev |
3_H1-34_N3-3 | 1.966 | 0.092 |
| Mean | Stdev |
3_H21-34_O2-3 | 1.902 | 0.123 |
| Mean | Stdev |
3_O6-34_H41-3 | 1.947 | 0.150 |
| Mean | Stdev |
4_H41-33_O6-4 | 1.957 | 0.165 |
| Mean | Stdev |
4_N3-33_H1-4 | 1.970 | 0.094 |
| Mean | Stdev |
4_O2-33_H21-4 | 1.906 | 0.129 |
| Mean | Stdev |
5_H1-32_N3-5 | 1.964 | 0.092 |
| Mean | Stdev |
5_H21-32_O2-5 | 1.875 | 0.117 |
| Mean | Stdev |
5_O6-32_H41-5 | 1.969 | 0.164 |
| Mean | Stdev |
6_H1-31_N3-6 | 1.959 | 0.091 |
| Mean | Stdev |
6_H21-31_O2-6 | 1.899 | 0.127 |
| Mean | Stdev |
6_O6-31_H41-6 | 1.955 | 0.155 |
| Mean | Stdev |
7_H1-30_N3-7 | 1.962 | 0.090 |
| Mean | Stdev |
7_H21-30_O2-7 | 1.898 | 0.126 |
| Mean | Stdev |
7_O6-30_H41-7 | 1.938 | 0.140 |
| Mean | Stdev |
8_H41-29_O6-8 | 1.973 | 0.172 |
| Mean | Stdev |
8_N3-29_H1-8 | 1.972 | 0.095 |
| Mean | Stdev |
8_O2-29_H21-8 | 1.900 | 0.124 |
| Mean | Stdev |
9_H1-28_N3-9 | 1.967 | 0.090 |
| Mean | Stdev |
9_H21-28_O2-9 | 1.879 | 0.116 |
| Mean | Stdev |
9_O6-28_H41-9 | 1.974 | 0.165 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 2.4899 | 1.8147 |
1 | H1-N3_1-36 | 2.2681 | 1.2320 |
1 | H21-O2_1-36 | 2.1641 | 1.3683 |
2 | H41-O6_2-35 | 1.9553 | 0.1565 |
2 | N3-H1_2-35 | 1.9643 | 0.0891 |
2 | O2-H21_2-35 | 1.8926 | 0.1215 |
3 | O6-H41_3-34 | 1.9468 | 0.1502 |
3 | H1-N3_3-34 | 1.9660 | 0.0925 |
3 | H21-O2_3-34 | 1.9023 | 0.1234 |
4 | H41-O6_4-33 | 1.9571 | 0.1648 |
4 | N3-H1_4-33 | 1.9698 | 0.0939 |
4 | O2-H21_4-33 | 1.9057 | 0.1288 |
5 | O6-H41_5-32 | 1.9692 | 0.1641 |
5 | H1-N3_5-32 | 1.9635 | 0.0920 |
5 | H21-O2_5-32 | 1.8748 | 0.1173 |
6 | O6-H41_6-31 | 1.9547 | 0.1546 |
6 | H1-N3_6-31 | 1.9594 | 0.0911 |
6 | H21-O2_6-31 | 1.8994 | 0.1272 |
7 | O6-H41_7-30 | 1.9377 | 0.1401 |
7 | H1-N3_7-30 | 1.9615 | 0.0899 |
7 | H21-O2_7-30 | 1.8977 | 0.1255 |
8 | H41-O6_8-29 | 1.9726 | 0.1718 |
8 | N3-H1_8-29 | 1.9723 | 0.0949 |
8 | O2-H21_8-29 | 1.8996 | 0.1244 |
9 | O6-H41_9-28 | 1.9739 | 0.1648 |
9 | H1-N3_9-28 | 1.9670 | 0.0903 |
9 | H21-O2_9-28 | 1.8791 | 0.1161 |
10 | O6-H41_10-27 | 1.9581 | 0.1663 |
10 | H1-N3_10-27 | 1.9636 | 0.0953 |
10 | H21-O2_10-27 | 1.9083 | 0.1292 |
11 | O6-H41_11-26 | 1.9429 | 0.1466 |
11 | H1-N3_11-26 | 1.9624 | 0.0910 |
11 | H21-O2_11-26 | 1.9040 | 0.1250 |
12 | H41-O6_12-25 | 1.9704 | 0.1680 |
12 | N3-H1_12-25 | 1.9663 | 0.0946 |
12 | O2-H21_12-25 | 1.8886 | 0.1211 |
13 | O6-H41_13-24 | 1.9607 | 0.1615 |
13 | H1-N3_13-24 | 1.9674 | 0.0948 |
13 | H21-O2_13-24 | 1.8897 | 0.1271 |
14 | O6-H41_14-23 | 1.9574 | 0.1663 |
14 | H1-N3_14-23 | 1.9643 | 0.0944 |
14 | H21-O2_14-23 | 1.8996 | 0.1252 |
15 | O6-H41_15-22 | 1.9521 | 0.1512 |
15 | H1-N3_15-22 | 1.9636 | 0.0917 |
15 | H21-O2_15-22 | 1.8985 | 0.1281 |
16 | H41-O6_16-21 | 1.9570 | 0.1591 |
16 | N3-H1_16-21 | 1.9651 | 0.0906 |
16 | O2-H21_16-21 | 1.8961 | 0.1249 |
17 | O6-H41_17-20 | 1.9529 | 0.1634 |
17 | H1-N3_17-20 | 1.9681 | 0.0973 |
17 | H21-O2_17-20 | 1.8902 | 0.1221 |
18 | H41-O6_18-19 | 1.9791 | 0.2096 |
18 | N3-H1_18-19 | 2.0015 | 0.1291 |
18 | O2-H21_18-19 | 1.9239 | 0.1558 |