Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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5' |
C |
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C |
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A |
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T |
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A |
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C |
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G |
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A |
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T |
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A |
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C |
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G |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
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G |
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T |
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A |
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T |
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G |
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G |
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T |
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A |
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T |
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G |
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C |
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C |
5' |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-26_O6-1 | 2.260 | 1.120 |
| Mean | Stdev |
1_N3-26_H1-1 | 2.158 | 0.832 |
| Mean | Stdev |
1_O2-26_H21-1 | 2.107 | 0.767 |
| Mean | Stdev |
10_H61-17_O4-10 | 1.998 | 0.199 |
| Mean | Stdev |
10_N1-17_H3-10 | 1.974 | 0.124 |
| Mean | Stdev |
11_H41-16_O6-11 | 1.965 | 0.158 |
| Mean | Stdev |
11_N3-16_H1-11 | 1.977 | 0.098 |
| Mean | Stdev |
11_O2-16_H21-11 | 1.915 | 0.133 |
| Mean | Stdev |
12_H1-15_N3-12 | 1.961 | 0.089 |
| Mean | Stdev |
12_H21-15_O2-12 | 1.880 | 0.114 |
| Mean | Stdev |
12_O6-15_H41-12 | 1.944 | 0.145 |
| Mean | Stdev |
13_H1-14_N3-13 | 5.434 | 0.218 |
| Mean | Stdev |
13_H21-14_O2-13 | 3.890 | 0.410 |
| Mean | Stdev |
13_O6-14_H41-13 | 6.013 | 0.203 |
| Mean | Stdev |
2_H41-25_O6-2 | 1.975 | 0.211 |
| Mean | Stdev |
2_N3-25_H1-2 | 1.971 | 0.108 |
| Mean | Stdev |
2_O2-25_H21-2 | 1.880 | 0.120 |
| Mean | Stdev |
3_H61-24_O4-3 | 1.983 | 0.178 |
| Mean | Stdev |
3_N1-24_H3-3 | 1.978 | 0.118 |
| Mean | Stdev |
4_H3-23_N1-4 | 1.992 | 0.128 |
| Mean | Stdev |
4_O4-23_H61-4 | 1.991 | 0.191 |
| Mean | Stdev |
5_H61-22_O4-5 | 2.015 | 0.201 |
| Mean | Stdev |
5_N1-22_H3-5 | 1.978 | 0.124 |
| Mean | Stdev |
6_H41-21_O6-6 | 1.967 | 0.215 |
| Mean | Stdev |
6_N3-21_H1-6 | 1.973 | 0.114 |
| Mean | Stdev |
6_O2-21_H21-6 | 1.875 | 0.119 |
| Mean | Stdev |
8_H61-19_O4-8 | 2.098 | 0.281 |
| Mean | Stdev |
8_N1-19_H3-8 | 1.997 | 0.146 |
| Mean | Stdev |
9_H3-18_N1-9 | 1.985 | 0.121 |
| Mean | Stdev |
9_O4-18_H61-9 | 2.062 | 0.228 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-26 | 2.2597 | 1.1198 |
1 | N3-H1_1-26 | 2.1580 | 0.8318 |
1 | O2-H21_1-26 | 2.1071 | 0.7666 |
2 | H41-O6_2-25 | 1.9747 | 0.2110 |
2 | N3-H1_2-25 | 1.9708 | 0.1076 |
2 | O2-H21_2-25 | 1.8798 | 0.1196 |
3 | N1-H3_3-24 | 1.9781 | 0.1183 |
3 | H61-O4_3-24 | 1.9831 | 0.1779 |
4 | H3-N1_4-23 | 1.9922 | 0.1283 |
4 | O4-H61_4-23 | 1.9907 | 0.1908 |
5 | N1-H3_5-22 | 1.9775 | 0.1237 |
5 | H61-O4_5-22 | 2.0148 | 0.2006 |
6 | H41-O6_6-21 | 1.9668 | 0.2147 |
6 | N3-H1_6-21 | 1.9726 | 0.1143 |
6 | O2-H21_6-21 | 1.8755 | 0.1192 |
8 | N1-H3_8-19 | 1.9966 | 0.1465 |
8 | H61-O4_8-19 | 2.0982 | 0.2808 |
9 | H3-N1_9-18 | 1.9852 | 0.1208 |
9 | O4-H61_9-18 | 2.0623 | 0.2283 |
10 | N1-H3_10-17 | 1.9743 | 0.1240 |
10 | H61-O4_10-17 | 1.9975 | 0.1993 |
11 | H41-O6_11-16 | 1.9650 | 0.1578 |
11 | N3-H1_11-16 | 1.9767 | 0.0977 |
11 | O2-H21_11-16 | 1.9145 | 0.1334 |
12 | O6-H41_12-15 | 1.9436 | 0.1453 |
12 | H1-N3_12-15 | 1.9610 | 0.0895 |
12 | H21-O2_12-15 | 1.8804 | 0.1136 |
13 | O6-H41_13-14 | 6.0132 | 0.2034 |
13 | H1-N3_13-14 | 5.4337 | 0.2185 |
13 | H21-O2_13-14 | 3.8903 | 0.4105 |