Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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17 |
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5' |
C |
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T |
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A |
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G |
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T |
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C |
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C |
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C |
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A |
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C |
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G |
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T |
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G |
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T |
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G |
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A |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
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A |
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T |
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C |
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A |
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G |
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G |
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G |
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T |
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G |
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C |
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A |
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C |
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A |
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C |
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T |
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C |
5' |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-34_O6-1 | 2.025 | 0.209 |
| Mean | Stdev |
1_N3-34_H1-1 | 1.980 | 0.106 |
| Mean | Stdev |
1_O2-34_H21-1 | 1.948 | 0.169 |
| Mean | Stdev |
10_H41-25_O6-10 | 1.978 | 0.158 |
| Mean | Stdev |
10_N3-25_H1-10 | 1.979 | 0.096 |
| Mean | Stdev |
10_O2-25_H21-10 | 1.878 | 0.116 |
| Mean | Stdev |
11_H1-24_N3-11 | 1.972 | 0.098 |
| Mean | Stdev |
11_H21-24_O2-11 | 1.876 | 0.116 |
| Mean | Stdev |
11_O6-24_H41-11 | 1.982 | 0.171 |
| Mean | Stdev |
12_H3-23_N1-12 | 1.969 | 0.114 |
| Mean | Stdev |
12_O4-23_H61-12 | 1.975 | 0.172 |
| Mean | Stdev |
13_H1-22_N3-13 | 1.985 | 0.100 |
| Mean | Stdev |
13_H21-22_O2-13 | 1.889 | 0.119 |
| Mean | Stdev |
13_O6-22_H41-13 | 1.977 | 0.163 |
| Mean | Stdev |
14_H3-21_N1-14 | 1.998 | 0.131 |
| Mean | Stdev |
14_O4-21_H61-14 | 1.943 | 0.152 |
| Mean | Stdev |
15_H1-20_N3-15 | 1.972 | 0.098 |
| Mean | Stdev |
15_H21-20_O2-15 | 1.873 | 0.115 |
| Mean | Stdev |
15_O6-20_H41-15 | 1.970 | 0.168 |
| Mean | Stdev |
16_H61-19_O4-16 | 1.983 | 0.176 |
| Mean | Stdev |
16_N1-19_H3-16 | 1.968 | 0.115 |
| Mean | Stdev |
17_H1-18_N3-17 | 1.972 | 0.107 |
| Mean | Stdev |
17_H21-18_O2-17 | 1.935 | 0.159 |
| Mean | Stdev |
17_O6-18_H41-17 | 2.020 | 0.216 |
| Mean | Stdev |
2_H3-33_N1-2 | 1.965 | 0.121 |
| Mean | Stdev |
2_O4-33_H61-2 | 2.010 | 0.206 |
| Mean | Stdev |
3_H61-32_O4-3 | 2.065 | 0.250 |
| Mean | Stdev |
3_N1-32_H3-3 | 1.954 | 0.113 |
| Mean | Stdev |
4_H1-31_N3-4 | 1.977 | 0.099 |
| Mean | Stdev |
4_H21-31_O2-4 | 1.898 | 0.124 |
| Mean | Stdev |
4_O6-31_H41-4 | 2.016 | 0.179 |
| Mean | Stdev |
5_H3-30_N1-5 | 1.982 | 0.122 |
| Mean | Stdev |
5_O4-30_H61-5 | 1.977 | 0.172 |
| Mean | Stdev |
6_H41-29_O6-6 | 1.952 | 0.149 |
| Mean | Stdev |
6_N3-29_H1-6 | 1.969 | 0.094 |
| Mean | Stdev |
6_O2-29_H21-6 | 1.913 | 0.130 |
| Mean | Stdev |
7_H41-28_O6-7 | 1.958 | 0.158 |
| Mean | Stdev |
7_N3-28_H1-7 | 1.971 | 0.093 |
| Mean | Stdev |
7_O2-28_H21-7 | 1.915 | 0.134 |
| Mean | Stdev |
8_H41-27_O6-8 | 1.960 | 0.168 |
| Mean | Stdev |
8_N3-27_H1-8 | 1.966 | 0.094 |
| Mean | Stdev |
8_O2-27_H21-8 | 1.877 | 0.116 |
| Mean | Stdev |
9_H61-26_O4-9 | 1.961 | 0.162 |
| Mean | Stdev |
9_N1-26_H3-9 | 1.982 | 0.122 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-34 | 2.0249 | 0.2093 |
1 | N3-H1_1-34 | 1.9803 | 0.1065 |
1 | O2-H21_1-34 | 1.9478 | 0.1687 |
2 | H3-N1_2-33 | 1.9649 | 0.1211 |
2 | O4-H61_2-33 | 2.0097 | 0.2056 |
3 | N1-H3_3-32 | 1.9543 | 0.1128 |
3 | H61-O4_3-32 | 2.0646 | 0.2503 |
4 | O6-H41_4-31 | 2.0156 | 0.1793 |
4 | H1-N3_4-31 | 1.9772 | 0.0987 |
4 | H21-O2_4-31 | 1.8978 | 0.1237 |
5 | H3-N1_5-30 | 1.9822 | 0.1225 |
5 | O4-H61_5-30 | 1.9768 | 0.1720 |
6 | H41-O6_6-29 | 1.9524 | 0.1488 |
6 | N3-H1_6-29 | 1.9689 | 0.0941 |
6 | O2-H21_6-29 | 1.9128 | 0.1303 |
7 | H41-O6_7-28 | 1.9585 | 0.1577 |
7 | N3-H1_7-28 | 1.9707 | 0.0929 |
7 | O2-H21_7-28 | 1.9145 | 0.1340 |
8 | H41-O6_8-27 | 1.9600 | 0.1677 |
8 | N3-H1_8-27 | 1.9661 | 0.0944 |
8 | O2-H21_8-27 | 1.8770 | 0.1164 |
9 | N1-H3_9-26 | 1.9822 | 0.1217 |
9 | H61-O4_9-26 | 1.9612 | 0.1617 |
10 | H41-O6_10-25 | 1.9775 | 0.1575 |
10 | N3-H1_10-25 | 1.9790 | 0.0962 |
10 | O2-H21_10-25 | 1.8777 | 0.1161 |
11 | O6-H41_11-24 | 1.9825 | 0.1711 |
11 | H1-N3_11-24 | 1.9719 | 0.0980 |
11 | H21-O2_11-24 | 1.8759 | 0.1163 |
12 | H3-N1_12-23 | 1.9686 | 0.1142 |
12 | O4-H61_12-23 | 1.9754 | 0.1721 |
13 | O6-H41_13-22 | 1.9773 | 0.1629 |
13 | H1-N3_13-22 | 1.9850 | 0.0998 |
13 | H21-O2_13-22 | 1.8888 | 0.1192 |
14 | H3-N1_14-21 | 1.9983 | 0.1309 |
14 | O4-H61_14-21 | 1.9427 | 0.1522 |
15 | O6-H41_15-20 | 1.9699 | 0.1681 |
15 | H1-N3_15-20 | 1.9720 | 0.0980 |
15 | H21-O2_15-20 | 1.8730 | 0.1150 |
16 | N1-H3_16-19 | 1.9684 | 0.1153 |
16 | H61-O4_16-19 | 1.9827 | 0.1763 |
17 | O6-H41_17-18 | 2.0200 | 0.2158 |
17 | H1-N3_17-18 | 1.9717 | 0.1070 |
17 | H21-O2_17-18 | 1.9351 | 0.1588 |