Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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5' |
C |
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T |
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G |
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C |
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T |
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A |
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T |
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A |
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A |
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A |
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A |
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G |
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G |
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C |
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T |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
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A |
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C |
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G |
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A |
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T |
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A |
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T |
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T |
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T |
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T |
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C |
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C |
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G |
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A |
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C |
5' |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-32_O6-1 | 2.268 | 1.233 |
| Mean | Stdev |
1_N3-32_H1-1 | 2.207 | 1.133 |
| Mean | Stdev |
1_O2-32_H21-1 | 2.165 | 1.145 |
| Mean | Stdev |
10_H61-23_O4-10 | 2.001 | 0.181 |
| Mean | Stdev |
10_N1-23_H3-10 | 1.969 | 0.115 |
| Mean | Stdev |
11_H61-22_O4-11 | 2.013 | 0.192 |
| Mean | Stdev |
11_N1-22_H3-11 | 1.952 | 0.110 |
| Mean | Stdev |
12_H1-21_N3-12 | 1.958 | 0.097 |
| Mean | Stdev |
12_H21-21_O2-12 | 1.871 | 0.116 |
| Mean | Stdev |
12_O6-21_H41-12 | 1.976 | 0.186 |
| Mean | Stdev |
13_H1-20_N3-13 | 1.962 | 0.092 |
| Mean | Stdev |
13_H21-20_O2-13 | 1.888 | 0.119 |
| Mean | Stdev |
13_O6-20_H41-13 | 1.974 | 0.171 |
| Mean | Stdev |
14_H41-19_O6-14 | 2.003 | 0.181 |
| Mean | Stdev |
14_N3-19_H1-14 | 1.975 | 0.100 |
| Mean | Stdev |
14_O2-19_H21-14 | 1.897 | 0.127 |
| Mean | Stdev |
15_H3-18_N1-15 | 1.958 | 0.132 |
| Mean | Stdev |
15_O4-18_H61-15 | 2.026 | 0.251 |
| Mean | Stdev |
16_H1-17_N3-16 | 3.026 | 2.406 |
| Mean | Stdev |
16_H21-17_O2-16 | 2.969 | 2.408 |
| Mean | Stdev |
16_O6-17_H41-16 | 3.097 | 2.572 |
| Mean | Stdev |
2_H3-31_N1-2 | 1.958 | 0.113 |
| Mean | Stdev |
2_O4-31_H61-2 | 2.013 | 0.213 |
| Mean | Stdev |
3_H1-30_N3-3 | 1.966 | 0.097 |
| Mean | Stdev |
3_H21-30_O2-3 | 1.884 | 0.118 |
| Mean | Stdev |
3_O6-30_H41-3 | 1.968 | 0.166 |
| Mean | Stdev |
4_H41-29_O6-4 | 1.999 | 0.177 |
| Mean | Stdev |
4_N3-29_H1-4 | 1.975 | 0.096 |
| Mean | Stdev |
4_O2-29_H21-4 | 1.898 | 0.127 |
| Mean | Stdev |
5_H3-28_N1-5 | 1.956 | 0.119 |
| Mean | Stdev |
5_O4-28_H61-5 | 2.038 | 0.230 |
| Mean | Stdev |
6_H61-27_O4-6 | 2.027 | 0.212 |
| Mean | Stdev |
6_N1-27_H3-6 | 1.988 | 0.124 |
| Mean | Stdev |
7_H3-26_N1-7 | 1.990 | 0.130 |
| Mean | Stdev |
7_O4-26_H61-7 | 2.042 | 0.225 |
| Mean | Stdev |
8_H61-25_O4-8 | 2.024 | 0.203 |
| Mean | Stdev |
8_N1-25_H3-8 | 1.971 | 0.122 |
| Mean | Stdev |
9_H61-24_O4-9 | 2.010 | 0.190 |
| Mean | Stdev |
9_N1-24_H3-9 | 1.970 | 0.119 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-32 | 2.2681 | 1.2331 |
1 | N3-H1_1-32 | 2.2070 | 1.1333 |
1 | O2-H21_1-32 | 2.1651 | 1.1448 |
2 | H3-N1_2-31 | 1.9577 | 0.1125 |
2 | O4-H61_2-31 | 2.0126 | 0.2131 |
3 | O6-H41_3-30 | 1.9679 | 0.1663 |
3 | H1-N3_3-30 | 1.9664 | 0.0974 |
3 | H21-O2_3-30 | 1.8844 | 0.1176 |
4 | H41-O6_4-29 | 1.9986 | 0.1770 |
4 | N3-H1_4-29 | 1.9750 | 0.0956 |
4 | O2-H21_4-29 | 1.8979 | 0.1267 |
5 | H3-N1_5-28 | 1.9563 | 0.1190 |
5 | O4-H61_5-28 | 2.0379 | 0.2296 |
6 | N1-H3_6-27 | 1.9876 | 0.1243 |
6 | H61-O4_6-27 | 2.0275 | 0.2121 |
7 | H3-N1_7-26 | 1.9898 | 0.1301 |
7 | O4-H61_7-26 | 2.0421 | 0.2251 |
8 | N1-H3_8-25 | 1.9710 | 0.1216 |
8 | H61-O4_8-25 | 2.0236 | 0.2029 |
9 | N1-H3_9-24 | 1.9702 | 0.1195 |
9 | H61-O4_9-24 | 2.0095 | 0.1903 |
10 | N1-H3_10-23 | 1.9686 | 0.1149 |
10 | H61-O4_10-23 | 2.0013 | 0.1807 |
11 | N1-H3_11-22 | 1.9525 | 0.1103 |
11 | H61-O4_11-22 | 2.0133 | 0.1923 |
12 | O6-H41_12-21 | 1.9758 | 0.1865 |
12 | H1-N3_12-21 | 1.9584 | 0.0970 |
12 | H21-O2_12-21 | 1.8706 | 0.1156 |
13 | O6-H41_13-20 | 1.9738 | 0.1708 |
13 | H1-N3_13-20 | 1.9619 | 0.0920 |
13 | H21-O2_13-20 | 1.8882 | 0.1192 |
14 | H41-O6_14-19 | 2.0031 | 0.1811 |
14 | N3-H1_14-19 | 1.9749 | 0.0996 |
14 | O2-H21_14-19 | 1.8967 | 0.1272 |
15 | H3-N1_15-18 | 1.9581 | 0.1324 |
15 | O4-H61_15-18 | 2.0257 | 0.2514 |
16 | O6-H41_16-17 | 3.0970 | 2.5724 |
16 | H1-N3_16-17 | 3.0263 | 2.4058 |
16 | H21-O2_16-17 | 2.9691 | 2.4084 |