Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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5' |
G |
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A |
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C |
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T |
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A |
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A |
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G |
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T |
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C |
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A |
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A |
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C |
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C |
3' |
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3' |
C |
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T |
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G |
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A |
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T |
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T |
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C |
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A |
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G |
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T |
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T |
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G |
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G |
5' |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-26_N3-1 | 2.010 | 0.168 |
| Mean | Stdev |
1_H21-26_O2-1 | 1.911 | 0.168 |
| Mean | Stdev |
1_O6-26_H41-1 | 2.023 | 0.300 |
| Mean | Stdev |
10_H61-17_O4-10 | 1.997 | 0.186 |
| Mean | Stdev |
10_N1-17_H3-10 | 1.968 | 0.118 |
| Mean | Stdev |
11_H61-16_O4-11 | 1.974 | 0.164 |
| Mean | Stdev |
11_N1-16_H3-11 | 1.973 | 0.115 |
| Mean | Stdev |
12_H41-15_O6-12 | 1.982 | 0.168 |
| Mean | Stdev |
12_N3-15_H1-12 | 1.963 | 0.093 |
| Mean | Stdev |
12_O2-15_H21-12 | 1.899 | 0.126 |
| Mean | Stdev |
13_H41-14_O6-13 | 2.051 | 0.341 |
| Mean | Stdev |
13_N3-14_H1-13 | 2.012 | 0.163 |
| Mean | Stdev |
13_O2-14_H21-13 | 1.904 | 0.146 |
| Mean | Stdev |
2_H61-25_O4-2 | 1.969 | 0.167 |
| Mean | Stdev |
2_N1-25_H3-2 | 1.975 | 0.118 |
| Mean | Stdev |
3_H41-24_O6-3 | 2.011 | 0.178 |
| Mean | Stdev |
3_N3-24_H1-3 | 1.972 | 0.098 |
| Mean | Stdev |
3_O2-24_H21-3 | 1.897 | 0.128 |
| Mean | Stdev |
4_H3-23_N1-4 | 1.960 | 0.128 |
| Mean | Stdev |
4_O4-23_H61-4 | 2.106 | 0.313 |
| Mean | Stdev |
5_H61-22_O4-5 | 2.026 | 0.210 |
| Mean | Stdev |
5_N1-22_H3-5 | 1.969 | 0.121 |
| Mean | Stdev |
6_H61-21_O4-6 | 2.022 | 0.195 |
| Mean | Stdev |
6_N1-21_H3-6 | 1.951 | 0.108 |
| Mean | Stdev |
7_H1-20_N3-7 | 1.959 | 0.095 |
| Mean | Stdev |
7_H21-20_O2-7 | 1.888 | 0.120 |
| Mean | Stdev |
7_O6-20_H41-7 | 1.984 | 0.166 |
| Mean | Stdev |
8_H3-19_N1-8 | 2.001 | 0.127 |
| Mean | Stdev |
8_O4-19_H61-8 | 1.955 | 0.159 |
| Mean | Stdev |
9_H41-18_O6-9 | 1.971 | 0.156 |
| Mean | Stdev |
9_N3-18_H1-9 | 1.975 | 0.095 |
| Mean | Stdev |
9_O2-18_H21-9 | 1.889 | 0.121 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-26 | 2.0226 | 0.2996 |
1 | H1-N3_1-26 | 2.0097 | 0.1677 |
1 | H21-O2_1-26 | 1.9108 | 0.1683 |
2 | N1-H3_2-25 | 1.9750 | 0.1185 |
2 | H61-O4_2-25 | 1.9687 | 0.1667 |
3 | H41-O6_3-24 | 2.0107 | 0.1782 |
3 | N3-H1_3-24 | 1.9720 | 0.0980 |
3 | O2-H21_3-24 | 1.8971 | 0.1281 |
4 | H3-N1_4-23 | 1.9598 | 0.1284 |
4 | O4-H61_4-23 | 2.1056 | 0.3126 |
5 | N1-H3_5-22 | 1.9693 | 0.1214 |
5 | H61-O4_5-22 | 2.0257 | 0.2096 |
6 | N1-H3_6-21 | 1.9509 | 0.1076 |
6 | H61-O4_6-21 | 2.0220 | 0.1954 |
7 | O6-H41_7-20 | 1.9836 | 0.1656 |
7 | H1-N3_7-20 | 1.9593 | 0.0951 |
7 | H21-O2_7-20 | 1.8878 | 0.1198 |
8 | H3-N1_8-19 | 2.0013 | 0.1267 |
8 | O4-H61_8-19 | 1.9551 | 0.1587 |
9 | H41-O6_9-18 | 1.9711 | 0.1559 |
9 | N3-H1_9-18 | 1.9752 | 0.0952 |
9 | O2-H21_9-18 | 1.8892 | 0.1214 |
10 | N1-H3_10-17 | 1.9680 | 0.1185 |
10 | H61-O4_10-17 | 1.9974 | 0.1859 |
11 | N1-H3_11-16 | 1.9731 | 0.1153 |
11 | H61-O4_11-16 | 1.9739 | 0.1638 |
12 | H41-O6_12-15 | 1.9821 | 0.1677 |
12 | N3-H1_12-15 | 1.9634 | 0.0927 |
12 | O2-H21_12-15 | 1.8987 | 0.1262 |
13 | H41-O6_13-14 | 2.0506 | 0.3407 |
13 | N3-H1_13-14 | 2.0122 | 0.1628 |
13 | O2-H21_13-14 | 1.9043 | 0.1463 |