Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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5' |
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3' |
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3' |
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5' |
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38 |
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37 |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-38_O6-1 | 2.344 | 1.348 |
| Mean | Stdev |
1_N3-38_H1-1 | 2.209 | 1.004 |
| Mean | Stdev |
1_O2-38_H21-1 | 2.112 | 0.854 |
| Mean | Stdev |
10_H41-29_O6-10 | 1.954 | 0.151 |
| Mean | Stdev |
10_N3-29_H1-10 | 1.967 | 0.090 |
| Mean | Stdev |
10_O2-29_H21-10 | 1.893 | 0.122 |
| Mean | Stdev |
11_H61-28_O4-11 | 2.006 | 0.198 |
| Mean | Stdev |
11_N1-28_H3-11 | 1.963 | 0.116 |
| Mean | Stdev |
12_H1-27_N3-12 | 1.968 | 0.092 |
| Mean | Stdev |
12_H21-27_O2-12 | 1.898 | 0.129 |
| Mean | Stdev |
12_O6-27_H41-12 | 1.980 | 0.166 |
| Mean | Stdev |
13_H1-26_N3-13 | 1.970 | 0.099 |
| Mean | Stdev |
13_H21-26_O2-13 | 1.914 | 0.136 |
| Mean | Stdev |
13_O6-26_H41-13 | 1.959 | 0.170 |
| Mean | Stdev |
14_H61-25_O4-14 | 2.006 | 0.198 |
| Mean | Stdev |
14_N1-25_H3-14 | 1.974 | 0.118 |
| Mean | Stdev |
15_H61-24_O4-15 | 2.022 | 0.197 |
| Mean | Stdev |
15_N1-24_H3-15 | 1.944 | 0.108 |
| Mean | Stdev |
16_H1-23_N3-16 | 1.966 | 0.094 |
| Mean | Stdev |
16_H21-23_O2-16 | 1.900 | 0.127 |
| Mean | Stdev |
16_O6-23_H41-16 | 1.968 | 0.160 |
| Mean | Stdev |
17_H41-22_O6-17 | 1.972 | 0.172 |
| Mean | Stdev |
17_N3-22_H1-17 | 1.966 | 0.097 |
| Mean | Stdev |
17_O2-22_H21-17 | 1.887 | 0.118 |
| Mean | Stdev |
18_H61-21_O4-18 | 1.987 | 0.190 |
| Mean | Stdev |
18_N1-21_H3-18 | 1.975 | 0.122 |
| Mean | Stdev |
19_H41-20_O6-19 | 2.046 | 0.331 |
| Mean | Stdev |
19_N3-20_H1-19 | 2.035 | 0.190 |
| Mean | Stdev |
19_O2-20_H21-19 | 1.916 | 0.179 |
| Mean | Stdev |
2_H1-37_N3-2 | 1.974 | 0.099 |
| Mean | Stdev |
2_H21-37_O2-2 | 1.881 | 0.121 |
| Mean | Stdev |
2_O6-37_H41-2 | 1.971 | 0.157 |
| Mean | Stdev |
3_H3-36_N1-3 | 1.975 | 0.118 |
| Mean | Stdev |
3_O4-36_H61-3 | 1.991 | 0.175 |
| Mean | Stdev |
4_H3-35_N1-4 | 1.951 | 0.107 |
| Mean | Stdev |
4_O4-35_H61-4 | 2.023 | 0.195 |
| Mean | Stdev |
5_H61-34_O4-5 | 2.122 | 0.658 |
| Mean | Stdev |
5_N1-34_H3-5 | 2.094 | 0.523 |
| Mean | Stdev |
6_H3-33_N1-6 | 1.995 | 0.125 |
| Mean | Stdev |
6_O4-33_H61-6 | 1.994 | 0.175 |
| Mean | Stdev |
7_H3-32_N1-7 | 1.962 | 0.116 |
| Mean | Stdev |
7_O4-32_H61-7 | 1.989 | 0.180 |
| Mean | Stdev |
8_H1-31_N3-8 | 1.964 | 0.091 |
| Mean | Stdev |
8_H21-31_O2-8 | 1.878 | 0.118 |
| Mean | Stdev |
8_O6-31_H41-8 | 1.970 | 0.161 |
| Mean | Stdev |
9_H1-30_N3-9 | 1.970 | 0.091 |
| Mean | Stdev |
9_H21-30_O2-9 | 1.923 | 0.135 |
| Mean | Stdev |
9_O6-30_H41-9 | 1.944 | 0.146 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-38 | 2.3436 | 1.3483 |
1 | N3-H1_1-38 | 2.2092 | 1.0039 |
1 | O2-H21_1-38 | 2.1121 | 0.8540 |
2 | O6-H41_2-37 | 1.9712 | 0.1570 |
2 | H1-N3_2-37 | 1.9740 | 0.0989 |
2 | H21-O2_2-37 | 1.8809 | 0.1211 |
3 | H3-N1_3-36 | 1.9754 | 0.1185 |
3 | O4-H61_3-36 | 1.9909 | 0.1754 |
4 | H3-N1_4-35 | 1.9509 | 0.1068 |
4 | O4-H61_4-35 | 2.0229 | 0.1954 |
5 | N1-H3_5-34 | 2.0942 | 0.5235 |
5 | H61-O4_5-34 | 2.1215 | 0.6585 |
6 | H3-N1_6-33 | 1.9946 | 0.1250 |
6 | O4-H61_6-33 | 1.9935 | 0.1748 |
7 | H3-N1_7-32 | 1.9615 | 0.1157 |
7 | O4-H61_7-32 | 1.9894 | 0.1805 |
8 | O6-H41_8-31 | 1.9704 | 0.1612 |
8 | H1-N3_8-31 | 1.9641 | 0.0911 |
8 | H21-O2_8-31 | 1.8781 | 0.1179 |
9 | O6-H41_9-30 | 1.9445 | 0.1457 |
9 | H1-N3_9-30 | 1.9705 | 0.0911 |
9 | H21-O2_9-30 | 1.9228 | 0.1352 |
10 | H41-O6_10-29 | 1.9542 | 0.1511 |
10 | N3-H1_10-29 | 1.9668 | 0.0898 |
10 | O2-H21_10-29 | 1.8930 | 0.1219 |
11 | N1-H3_11-28 | 1.9629 | 0.1155 |
11 | H61-O4_11-28 | 2.0065 | 0.1979 |
12 | O6-H41_12-27 | 1.9796 | 0.1660 |
12 | H1-N3_12-27 | 1.9685 | 0.0923 |
12 | H21-O2_12-27 | 1.8983 | 0.1292 |
13 | O6-H41_13-26 | 1.9592 | 0.1695 |
13 | H1-N3_13-26 | 1.9705 | 0.0990 |
13 | H21-O2_13-26 | 1.9143 | 0.1355 |
14 | N1-H3_14-25 | 1.9736 | 0.1181 |
14 | H61-O4_14-25 | 2.0056 | 0.1981 |
15 | N1-H3_15-24 | 1.9445 | 0.1078 |
15 | H61-O4_15-24 | 2.0217 | 0.1966 |
16 | O6-H41_16-23 | 1.9682 | 0.1597 |
16 | H1-N3_16-23 | 1.9656 | 0.0941 |
16 | H21-O2_16-23 | 1.9001 | 0.1274 |
17 | H41-O6_17-22 | 1.9719 | 0.1715 |
17 | N3-H1_17-22 | 1.9656 | 0.0965 |
17 | O2-H21_17-22 | 1.8873 | 0.1177 |
18 | N1-H3_18-21 | 1.9749 | 0.1222 |
18 | H61-O4_18-21 | 1.9871 | 0.1903 |
19 | H41-O6_19-20 | 2.0456 | 0.3310 |
19 | N3-H1_19-20 | 2.0350 | 0.1903 |
19 | O2-H21_19-20 | 1.9164 | 0.1789 |