Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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5' |
G |
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T |
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C |
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T |
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C |
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T |
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A |
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T |
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T |
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G |
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T |
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C |
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C |
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T |
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G |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
C |
- |
A |
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G |
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A |
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G |
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A |
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T |
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A |
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A |
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C |
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A |
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G |
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G |
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A |
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C |
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C |
5' |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-32_N3-1 | 2.013 | 0.144 |
| Mean | Stdev |
1_H21-32_O2-1 | 1.908 | 0.147 |
| Mean | Stdev |
1_O6-32_H41-1 | 2.021 | 0.259 |
| Mean | Stdev |
10_H1-23_N3-10 | 1.991 | 0.121 |
| Mean | Stdev |
10_H21-23_O2-10 | 1.883 | 0.127 |
| Mean | Stdev |
10_O6-23_H41-10 | 2.002 | 0.210 |
| Mean | Stdev |
11_H3-22_N1-11 | 1.999 | 0.131 |
| Mean | Stdev |
11_O4-22_H61-11 | 1.972 | 0.178 |
| Mean | Stdev |
12_H41-21_O6-12 | 1.964 | 0.160 |
| Mean | Stdev |
12_N3-21_H1-12 | 1.964 | 0.096 |
| Mean | Stdev |
12_O2-21_H21-12 | 1.904 | 0.136 |
| Mean | Stdev |
13_H41-20_O6-13 | 1.995 | 0.184 |
| Mean | Stdev |
13_N3-20_H1-13 | 1.969 | 0.096 |
| Mean | Stdev |
13_O2-20_H21-13 | 1.898 | 0.130 |
| Mean | Stdev |
14_H3-19_N1-14 | 1.971 | 0.119 |
| Mean | Stdev |
14_O4-19_H61-14 | 1.989 | 0.185 |
| Mean | Stdev |
15_H1-18_N3-15 | 1.965 | 0.100 |
| Mean | Stdev |
15_H21-18_O2-15 | 1.879 | 0.120 |
| Mean | Stdev |
15_O6-18_H41-15 | 1.973 | 0.186 |
| Mean | Stdev |
16_H1-17_N3-16 | 2.049 | 0.604 |
| Mean | Stdev |
16_H21-17_O2-16 | 2.014 | 0.595 |
| Mean | Stdev |
16_O6-17_H41-16 | 2.068 | 0.726 |
| Mean | Stdev |
2_H3-31_N1-2 | 1.980 | 0.126 |
| Mean | Stdev |
2_O4-31_H61-2 | 1.999 | 0.196 |
| Mean | Stdev |
3_H41-30_O6-3 | 1.984 | 0.186 |
| Mean | Stdev |
3_N3-30_H1-3 | 1.962 | 0.101 |
| Mean | Stdev |
3_O2-30_H21-3 | 1.903 | 0.130 |
| Mean | Stdev |
4_H3-29_N1-4 | 1.975 | 0.123 |
| Mean | Stdev |
4_O4-29_H61-4 | 2.013 | 0.214 |
| Mean | Stdev |
5_H41-28_O6-5 | 1.996 | 0.173 |
| Mean | Stdev |
5_N3-28_H1-5 | 1.976 | 0.098 |
| Mean | Stdev |
5_O2-28_H21-5 | 1.907 | 0.130 |
| Mean | Stdev |
6_H3-27_N1-6 | 1.964 | 0.124 |
| Mean | Stdev |
6_O4-27_H61-6 | 2.038 | 0.244 |
| Mean | Stdev |
7_H61-26_O4-7 | 2.022 | 0.214 |
| Mean | Stdev |
7_N1-26_H3-7 | 1.990 | 0.130 |
| Mean | Stdev |
8_H3-25_N1-8 | 1.974 | 0.118 |
| Mean | Stdev |
8_O4-25_H61-8 | 2.019 | 0.192 |
| Mean | Stdev |
9_H3-24_N1-9 | 1.970 | 0.124 |
| Mean | Stdev |
9_O4-24_H61-9 | 2.002 | 0.206 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-32 | 2.0211 | 0.2594 |
1 | H1-N3_1-32 | 2.0132 | 0.1442 |
1 | H21-O2_1-32 | 1.9080 | 0.1470 |
2 | H3-N1_2-31 | 1.9804 | 0.1264 |
2 | O4-H61_2-31 | 1.9993 | 0.1958 |
3 | H41-O6_3-30 | 1.9840 | 0.1859 |
3 | N3-H1_3-30 | 1.9625 | 0.1009 |
3 | O2-H21_3-30 | 1.9027 | 0.1300 |
4 | H3-N1_4-29 | 1.9750 | 0.1227 |
4 | O4-H61_4-29 | 2.0131 | 0.2143 |
5 | H41-O6_5-28 | 1.9964 | 0.1728 |
5 | N3-H1_5-28 | 1.9760 | 0.0982 |
5 | O2-H21_5-28 | 1.9066 | 0.1297 |
6 | H3-N1_6-27 | 1.9644 | 0.1243 |
6 | O4-H61_6-27 | 2.0376 | 0.2441 |
7 | N1-H3_7-26 | 1.9896 | 0.1296 |
7 | H61-O4_7-26 | 2.0220 | 0.2138 |
8 | H3-N1_8-25 | 1.9741 | 0.1184 |
8 | O4-H61_8-25 | 2.0194 | 0.1915 |
9 | H3-N1_9-24 | 1.9696 | 0.1241 |
9 | O4-H61_9-24 | 2.0016 | 0.2058 |
10 | O6-H41_10-23 | 2.0019 | 0.2097 |
10 | H1-N3_10-23 | 1.9907 | 0.1214 |
10 | H21-O2_10-23 | 1.8832 | 0.1270 |
11 | H3-N1_11-22 | 1.9988 | 0.1308 |
11 | O4-H61_11-22 | 1.9721 | 0.1781 |
12 | H41-O6_12-21 | 1.9638 | 0.1603 |
12 | N3-H1_12-21 | 1.9638 | 0.0956 |
12 | O2-H21_12-21 | 1.9039 | 0.1356 |
13 | H41-O6_13-20 | 1.9947 | 0.1839 |
13 | N3-H1_13-20 | 1.9688 | 0.0957 |
13 | O2-H21_13-20 | 1.8981 | 0.1295 |
14 | H3-N1_14-19 | 1.9709 | 0.1195 |
14 | O4-H61_14-19 | 1.9886 | 0.1850 |
15 | O6-H41_15-18 | 1.9729 | 0.1857 |
15 | H1-N3_15-18 | 1.9646 | 0.0995 |
15 | H21-O2_15-18 | 1.8789 | 0.1201 |
16 | O6-H41_16-17 | 2.0684 | 0.7261 |
16 | H1-N3_16-17 | 2.0492 | 0.6040 |
16 | H21-O2_16-17 | 2.0136 | 0.5945 |