Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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5' |
C |
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G |
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C |
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G |
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T |
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C |
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G |
- |
A |
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C |
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G |
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C |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
- |
C |
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G |
- |
C |
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A |
- |
G |
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C |
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T |
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G |
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C |
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G |
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C |
5' |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 2.867 | 2.184 |
| Mean | Stdev |
1_N3-24_H1-1 | 2.739 | 1.989 |
| Mean | Stdev |
1_O2-24_H21-1 | 2.665 | 1.985 |
| Mean | Stdev |
10_H1-15_N3-10 | 1.964 | 0.092 |
| Mean | Stdev |
10_H21-15_O2-10 | 1.890 | 0.121 |
| Mean | Stdev |
10_O6-15_H41-10 | 1.952 | 0.152 |
| Mean | Stdev |
11_H41-14_O6-11 | 1.943 | 0.149 |
| Mean | Stdev |
11_N3-14_H1-11 | 1.964 | 0.093 |
| Mean | Stdev |
11_O2-14_H21-11 | 1.898 | 0.129 |
| Mean | Stdev |
12_H1-13_N3-12 | 5.439 | 4.832 |
| Mean | Stdev |
12_H21-13_O2-12 | 4.747 | 3.885 |
| Mean | Stdev |
12_O6-13_H41-12 | 6.394 | 6.121 |
| Mean | Stdev |
2_H1-23_N3-2 | 1.963 | 0.093 |
| Mean | Stdev |
2_H21-23_O2-2 | 1.892 | 0.127 |
| Mean | Stdev |
2_O6-23_H41-2 | 1.942 | 0.148 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.949 | 0.150 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.966 | 0.091 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.888 | 0.121 |
| Mean | Stdev |
4_H1-21_N3-4 | 1.970 | 0.098 |
| Mean | Stdev |
4_H21-21_O2-4 | 1.886 | 0.121 |
| Mean | Stdev |
4_O6-21_H41-4 | 1.977 | 0.170 |
| Mean | Stdev |
5_H3-20_N1-5 | 2.000 | 0.143 |
| Mean | Stdev |
5_O4-20_H61-5 | 1.964 | 0.181 |
| Mean | Stdev |
6_H41-19_O6-6 | 1.962 | 0.170 |
| Mean | Stdev |
6_N3-19_H1-6 | 1.968 | 0.097 |
| Mean | Stdev |
6_O2-19_H21-6 | 1.894 | 0.126 |
| Mean | Stdev |
7_H1-18_N3-7 | 1.967 | 0.093 |
| Mean | Stdev |
7_H21-18_O2-7 | 1.888 | 0.121 |
| Mean | Stdev |
7_O6-18_H41-7 | 1.965 | 0.160 |
| Mean | Stdev |
8_H61-17_O4-8 | 1.957 | 0.171 |
| Mean | Stdev |
8_N1-17_H3-8 | 2.002 | 0.137 |
| Mean | Stdev |
9_H41-16_O6-9 | 1.974 | 0.165 |
| Mean | Stdev |
9_N3-16_H1-9 | 1.973 | 0.099 |
| Mean | Stdev |
9_O2-16_H21-9 | 1.885 | 0.121 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 2.8666 | 2.1843 |
1 | N3-H1_1-24 | 2.7394 | 1.9894 |
1 | O2-H21_1-24 | 2.6651 | 1.9848 |
2 | O6-H41_2-23 | 1.9418 | 0.1483 |
2 | H1-N3_2-23 | 1.9629 | 0.0927 |
2 | H21-O2_2-23 | 1.8920 | 0.1266 |
3 | H41-O6_3-22 | 1.9486 | 0.1504 |
3 | N3-H1_3-22 | 1.9655 | 0.0911 |
3 | O2-H21_3-22 | 1.8884 | 0.1214 |
4 | O6-H41_4-21 | 1.9767 | 0.1697 |
4 | H1-N3_4-21 | 1.9702 | 0.0983 |
4 | H21-O2_4-21 | 1.8862 | 0.1209 |
5 | H3-N1_5-20 | 1.9997 | 0.1430 |
5 | O4-H61_5-20 | 1.9638 | 0.1812 |
6 | H41-O6_6-19 | 1.9620 | 0.1703 |
6 | N3-H1_6-19 | 1.9683 | 0.0966 |
6 | O2-H21_6-19 | 1.8943 | 0.1260 |
7 | O6-H41_7-18 | 1.9648 | 0.1595 |
7 | H1-N3_7-18 | 1.9672 | 0.0926 |
7 | H21-O2_7-18 | 1.8876 | 0.1214 |
8 | N1-H3_8-17 | 2.0023 | 0.1366 |
8 | H61-O4_8-17 | 1.9572 | 0.1707 |
9 | H41-O6_9-16 | 1.9743 | 0.1648 |
9 | N3-H1_9-16 | 1.9727 | 0.0987 |
9 | O2-H21_9-16 | 1.8852 | 0.1215 |
10 | O6-H41_10-15 | 1.9520 | 0.1522 |
10 | H1-N3_10-15 | 1.9638 | 0.0920 |
10 | H21-O2_10-15 | 1.8899 | 0.1215 |
11 | H41-O6_11-14 | 1.9430 | 0.1490 |
11 | N3-H1_11-14 | 1.9641 | 0.0926 |
11 | O2-H21_11-14 | 1.8978 | 0.1286 |
12 | O6-H41_12-13 | 6.3936 | 6.1211 |
12 | H1-N3_12-13 | 5.4392 | 4.8325 |
12 | H21-O2_12-13 | 4.7468 | 3.8851 |