Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
|
1 |
|
2 |
|
3 |
|
4 |
|
5 |
|
6 |
|
7 |
|
8 |
|
9 |
|
10 |
|
| 5' |
C |
- |
G |
- |
C |
- |
G |
- |
C |
- |
G |
- |
C |
- |
G |
- |
C |
- |
G |
3' |
|
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
| 3' |
G |
- |
C |
- |
G |
- |
C |
- |
G |
- |
C |
- |
G |
- |
C |
- |
G |
- |
C |
5' |
|
20 |
|
19 |
|
18 |
|
17 |
|
16 |
|
15 |
|
14 |
|
13 |
|
12 |
|
11 |
|
Interactive Sequence (see Help)
Sorry, information not available...
Sorry, information not available...
| Mean | Stdev |
| 1_H41-20_O6-1 | 12.300 | 4.358 |
| Mean | Stdev |
| 1_N3-20_H1-1 | 10.661 | 5.099 |
| Mean | Stdev |
| 1_O2-20_H21-1 | 9.890 | 5.479 |
| Mean | Stdev |
| 10_H1-11_N3-10 | 4.567 | 2.874 |
| Mean | Stdev |
| 10_H21-11_O2-10 | 4.617 | 1.850 |
| Mean | Stdev |
| 10_O6-11_H41-10 | 6.820 | 3.688 |
| Mean | Stdev |
| 2_H1-19_N3-2 | 1.966 | 0.093 |
| Mean | Stdev |
| 2_H21-19_O2-2 | 3.468 | 0.157 |
| Mean | Stdev |
| 2_O6-19_H41-2 | 3.527 | 0.180 |
| Mean | Stdev |
| 3_H41-18_O6-3 | 3.514 | 0.173 |
| Mean | Stdev |
| 3_N3-18_H1-3 | 1.959 | 0.089 |
| Mean | Stdev |
| 3_O2-18_H21-3 | 3.438 | 0.151 |
| Mean | Stdev |
| 4_H1-17_N3-4 | 1.958 | 0.089 |
| Mean | Stdev |
| 4_H21-17_O2-4 | 3.434 | 0.155 |
| Mean | Stdev |
| 4_O6-17_H41-4 | 3.511 | 0.169 |
| Mean | Stdev |
| 5_H41-16_O6-5 | 3.514 | 0.170 |
| Mean | Stdev |
| 5_N3-16_H1-5 | 1.962 | 0.090 |
| Mean | Stdev |
| 5_O2-16_H21-5 | 3.440 | 0.157 |
| Mean | Stdev |
| 6_H1-15_N3-6 | 1.962 | 0.093 |
| Mean | Stdev |
| 6_H21-15_O2-6 | 3.442 | 0.155 |
| Mean | Stdev |
| 6_O6-15_H41-6 | 3.512 | 0.173 |
| Mean | Stdev |
| 7_H41-14_O6-7 | 3.516 | 0.174 |
| Mean | Stdev |
| 7_N3-14_H1-7 | 1.963 | 0.090 |
| Mean | Stdev |
| 7_O2-14_H21-7 | 3.447 | 0.154 |
| Mean | Stdev |
| 8_H1-13_N3-8 | 1.960 | 0.090 |
| Mean | Stdev |
| 8_H21-13_O2-8 | 3.437 | 0.153 |
| Mean | Stdev |
| 8_O6-13_H41-8 | 3.502 | 0.167 |
| Mean | Stdev |
| 9_H41-12_O6-9 | 3.544 | 0.186 |
| Mean | Stdev |
| 9_N3-12_H1-9 | 1.959 | 0.091 |
| Mean | Stdev |
| 9_O2-12_H21-9 | 3.442 | 0.149 |
| Nucleotide Number | Hydrogen Bond | Mean | Stdev |
| 1 | H41-O6_1-20 | 12.2996 | 4.3580 |
| 1 | N3-H1_1-20 | 10.6608 | 5.0990 |
| 1 | O2-H21_1-20 | 9.8899 | 5.4792 |
| 2 | O6-H41_2-19 | 3.5275 | 0.1803 |
| 2 | H1-N3_2-19 | 1.9659 | 0.0927 |
| 2 | H21-O2_2-19 | 3.4678 | 0.1574 |
| 3 | H41-O6_3-18 | 3.5144 | 0.1735 |
| 3 | N3-H1_3-18 | 1.9589 | 0.0894 |
| 3 | O2-H21_3-18 | 3.4376 | 0.1512 |
| 4 | O6-H41_4-17 | 3.5110 | 0.1686 |
| 4 | H1-N3_4-17 | 1.9576 | 0.0890 |
| 4 | H21-O2_4-17 | 3.4345 | 0.1550 |
| 5 | H41-O6_5-16 | 3.5136 | 0.1704 |
| 5 | N3-H1_5-16 | 1.9621 | 0.0899 |
| 5 | O2-H21_5-16 | 3.4399 | 0.1565 |
| 6 | O6-H41_6-15 | 3.5122 | 0.1735 |
| 6 | H1-N3_6-15 | 1.9622 | 0.0928 |
| 6 | H21-O2_6-15 | 3.4423 | 0.1546 |
| 7 | H41-O6_7-14 | 3.5157 | 0.1744 |
| 7 | N3-H1_7-14 | 1.9627 | 0.0904 |
| 7 | O2-H21_7-14 | 3.4472 | 0.1543 |
| 8 | O6-H41_8-13 | 3.5016 | 0.1671 |
| 8 | H1-N3_8-13 | 1.9601 | 0.0898 |
| 8 | H21-O2_8-13 | 3.4366 | 0.1530 |
| 9 | H41-O6_9-12 | 3.5443 | 0.1857 |
| 9 | N3-H1_9-12 | 1.9590 | 0.0908 |
| 9 | O2-H21_9-12 | 3.4415 | 0.1493 |
| 10 | O6-H41_10-11 | 6.8196 | 3.6877 |
| 10 | H1-N3_10-11 | 4.5666 | 2.8740 |
| 10 | H21-O2_10-11 | 4.6175 | 1.8501 |
