Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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5' |
C |
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G |
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C |
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G |
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C |
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G |
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C |
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G |
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C |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
- |
C |
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G |
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C |
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G |
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C |
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G |
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C |
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G |
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C |
5' |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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12 |
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11 |
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Interactive Sequence (see Help)
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| Mean | Stdev |
1_H41-20_O6-1 | 4.121 | 2.062 |
| Mean | Stdev |
1_N3-20_H1-1 | 2.653 | 2.395 |
| Mean | Stdev |
1_O2-20_H21-1 | 4.349 | 2.427 |
| Mean | Stdev |
10_H1-11_N3-10 | 4.360 | 4.697 |
| Mean | Stdev |
10_H21-11_O2-10 | 5.782 | 4.216 |
| Mean | Stdev |
10_O6-11_H41-10 | 5.388 | 4.275 |
| Mean | Stdev |
2_H1-19_N3-2 | 1.964 | 0.092 |
| Mean | Stdev |
2_H21-19_O2-2 | 3.451 | 0.156 |
| Mean | Stdev |
2_O6-19_H41-2 | 3.563 | 0.190 |
| Mean | Stdev |
3_H41-18_O6-3 | 3.529 | 0.177 |
| Mean | Stdev |
3_N3-18_H1-3 | 1.961 | 0.091 |
| Mean | Stdev |
3_O2-18_H21-3 | 3.460 | 0.155 |
| Mean | Stdev |
4_H1-17_N3-4 | 1.958 | 0.088 |
| Mean | Stdev |
4_H21-17_O2-4 | 3.453 | 0.154 |
| Mean | Stdev |
4_O6-17_H41-4 | 3.543 | 0.177 |
| Mean | Stdev |
5_H41-16_O6-5 | 3.536 | 0.173 |
| Mean | Stdev |
5_N3-16_H1-5 | 1.959 | 0.090 |
| Mean | Stdev |
5_O2-16_H21-5 | 3.454 | 0.151 |
| Mean | Stdev |
6_H1-15_N3-6 | 1.958 | 0.088 |
| Mean | Stdev |
6_H21-15_O2-6 | 3.456 | 0.150 |
| Mean | Stdev |
6_O6-15_H41-6 | 3.538 | 0.175 |
| Mean | Stdev |
7_H41-14_O6-7 | 3.536 | 0.171 |
| Mean | Stdev |
7_N3-14_H1-7 | 1.956 | 0.086 |
| Mean | Stdev |
7_O2-14_H21-7 | 3.453 | 0.152 |
| Mean | Stdev |
8_H1-13_N3-8 | 1.957 | 0.090 |
| Mean | Stdev |
8_H21-13_O2-8 | 3.455 | 0.154 |
| Mean | Stdev |
8_O6-13_H41-8 | 3.529 | 0.174 |
| Mean | Stdev |
9_H41-12_O6-9 | 3.568 | 0.198 |
| Mean | Stdev |
9_N3-12_H1-9 | 1.964 | 0.097 |
| Mean | Stdev |
9_O2-12_H21-9 | 3.453 | 0.154 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-20 | 4.1214 | 2.0624 |
1 | N3-H1_1-20 | 2.6528 | 2.3946 |
1 | O2-H21_1-20 | 4.3488 | 2.4266 |
2 | O6-H41_2-19 | 3.5634 | 0.1897 |
2 | H1-N3_2-19 | 1.9636 | 0.0917 |
2 | H21-O2_2-19 | 3.4515 | 0.1561 |
3 | H41-O6_3-18 | 3.5285 | 0.1767 |
3 | N3-H1_3-18 | 1.9608 | 0.0910 |
3 | O2-H21_3-18 | 3.4600 | 0.1553 |
4 | O6-H41_4-17 | 3.5428 | 0.1768 |
4 | H1-N3_4-17 | 1.9579 | 0.0885 |
4 | H21-O2_4-17 | 3.4525 | 0.1538 |
5 | H41-O6_5-16 | 3.5363 | 0.1729 |
5 | N3-H1_5-16 | 1.9588 | 0.0897 |
5 | O2-H21_5-16 | 3.4536 | 0.1514 |
6 | O6-H41_6-15 | 3.5376 | 0.1750 |
6 | H1-N3_6-15 | 1.9577 | 0.0881 |
6 | H21-O2_6-15 | 3.4557 | 0.1500 |
7 | H41-O6_7-14 | 3.5361 | 0.1705 |
7 | N3-H1_7-14 | 1.9557 | 0.0865 |
7 | O2-H21_7-14 | 3.4529 | 0.1522 |
8 | O6-H41_8-13 | 3.5290 | 0.1743 |
8 | H1-N3_8-13 | 1.9572 | 0.0903 |
8 | H21-O2_8-13 | 3.4551 | 0.1540 |
9 | H41-O6_9-12 | 3.5678 | 0.1983 |
9 | N3-H1_9-12 | 1.9645 | 0.0972 |
9 | O2-H21_9-12 | 3.4533 | 0.1537 |
10 | O6-H41_10-11 | 5.3882 | 4.2749 |
10 | H1-N3_10-11 | 4.3597 | 4.6967 |
10 | H21-O2_10-11 | 5.7823 | 4.2161 |