Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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5' |
C |
- |
G |
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C |
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G |
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C |
- |
G |
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C |
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G |
- |
C |
- |
G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
- |
C |
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G |
- |
C |
- |
G |
- |
C |
- |
G |
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C |
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G |
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C |
5' |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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12 |
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11 |
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Interactive Sequence (see Help)
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| Mean | Stdev |
1_H41-20_O6-1 | 3.527 | 0.228 |
| Mean | Stdev |
1_N3-20_H1-1 | 1.995 | 0.203 |
| Mean | Stdev |
1_O2-20_H21-1 | 3.540 | 0.282 |
| Mean | Stdev |
10_H1-11_N3-10 | 1.994 | 0.177 |
| Mean | Stdev |
10_H21-11_O2-10 | 3.549 | 0.278 |
| Mean | Stdev |
10_O6-11_H41-10 | 3.562 | 0.349 |
| Mean | Stdev |
2_H1-19_N3-2 | 1.962 | 0.094 |
| Mean | Stdev |
2_H21-19_O2-2 | 3.440 | 0.151 |
| Mean | Stdev |
2_O6-19_H41-2 | 3.561 | 0.190 |
| Mean | Stdev |
3_H41-18_O6-3 | 3.509 | 0.173 |
| Mean | Stdev |
3_N3-18_H1-3 | 1.963 | 0.092 |
| Mean | Stdev |
3_O2-18_H21-3 | 3.439 | 0.157 |
| Mean | Stdev |
4_H1-17_N3-4 | 1.964 | 0.092 |
| Mean | Stdev |
4_H21-17_O2-4 | 3.441 | 0.156 |
| Mean | Stdev |
4_O6-17_H41-4 | 3.516 | 0.173 |
| Mean | Stdev |
5_H41-16_O6-5 | 3.507 | 0.170 |
| Mean | Stdev |
5_N3-16_H1-5 | 1.961 | 0.091 |
| Mean | Stdev |
5_O2-16_H21-5 | 3.445 | 0.159 |
| Mean | Stdev |
6_H1-15_N3-6 | 1.965 | 0.092 |
| Mean | Stdev |
6_H21-15_O2-6 | 3.440 | 0.155 |
| Mean | Stdev |
6_O6-15_H41-6 | 3.512 | 0.170 |
| Mean | Stdev |
7_H41-14_O6-7 | 3.513 | 0.172 |
| Mean | Stdev |
7_N3-14_H1-7 | 1.962 | 0.089 |
| Mean | Stdev |
7_O2-14_H21-7 | 3.439 | 0.158 |
| Mean | Stdev |
8_H1-13_N3-8 | 1.963 | 0.090 |
| Mean | Stdev |
8_H21-13_O2-8 | 3.436 | 0.159 |
| Mean | Stdev |
8_O6-13_H41-8 | 3.513 | 0.170 |
| Mean | Stdev |
9_H41-12_O6-9 | 3.562 | 0.193 |
| Mean | Stdev |
9_N3-12_H1-9 | 1.965 | 0.095 |
| Mean | Stdev |
9_O2-12_H21-9 | 3.442 | 0.153 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-20 | 3.5272 | 0.2278 |
1 | N3-H1_1-20 | 1.9951 | 0.2031 |
1 | O2-H21_1-20 | 3.5397 | 0.2822 |
2 | O6-H41_2-19 | 3.5614 | 0.1901 |
2 | H1-N3_2-19 | 1.9619 | 0.0936 |
2 | H21-O2_2-19 | 3.4397 | 0.1508 |
3 | H41-O6_3-18 | 3.5089 | 0.1728 |
3 | N3-H1_3-18 | 1.9634 | 0.0916 |
3 | O2-H21_3-18 | 3.4386 | 0.1567 |
4 | O6-H41_4-17 | 3.5162 | 0.1726 |
4 | H1-N3_4-17 | 1.9635 | 0.0921 |
4 | H21-O2_4-17 | 3.4410 | 0.1561 |
5 | H41-O6_5-16 | 3.5071 | 0.1701 |
5 | N3-H1_5-16 | 1.9612 | 0.0909 |
5 | O2-H21_5-16 | 3.4450 | 0.1590 |
6 | O6-H41_6-15 | 3.5123 | 0.1698 |
6 | H1-N3_6-15 | 1.9648 | 0.0925 |
6 | H21-O2_6-15 | 3.4401 | 0.1550 |
7 | H41-O6_7-14 | 3.5130 | 0.1720 |
7 | N3-H1_7-14 | 1.9624 | 0.0888 |
7 | O2-H21_7-14 | 3.4392 | 0.1581 |
8 | O6-H41_8-13 | 3.5128 | 0.1697 |
8 | H1-N3_8-13 | 1.9632 | 0.0903 |
8 | H21-O2_8-13 | 3.4359 | 0.1593 |
9 | H41-O6_9-12 | 3.5618 | 0.1932 |
9 | N3-H1_9-12 | 1.9650 | 0.0947 |
9 | O2-H21_9-12 | 3.4416 | 0.1527 |
10 | O6-H41_10-11 | 3.5624 | 0.3487 |
10 | H1-N3_10-11 | 1.9938 | 0.1774 |
10 | H21-O2_10-11 | 3.5485 | 0.2775 |