Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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5' |
C |
- |
G |
- |
C |
- |
G |
- |
A |
- |
A |
- |
A |
- |
A |
- |
T |
- |
T |
- |
T |
- |
T |
- |
C |
- |
G |
- |
C |
- |
G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
- |
C |
- |
G |
- |
C |
- |
T |
- |
T |
- |
T |
- |
T |
- |
A |
- |
A |
- |
A |
- |
A |
- |
G |
- |
C |
- |
G |
- |
C |
5' |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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Interactive Sequence (see Help)
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| Mean | Stdev |
10_H3-24_N1-10 | 5.231 | 0.828 |
| Mean | Stdev |
10_O4-24_H61-10 | 6.768 | 0.833 |
| Mean | Stdev |
11_H3-23_N1-11 | 3.445 | 0.295 |
| Mean | Stdev |
11_O4-23_H61-11 | 6.008 | 0.406 |
| Mean | Stdev |
12_H3-22_N1-12 | 3.471 | 0.308 |
| Mean | Stdev |
12_O4-22_H61-12 | 6.014 | 0.417 |
| Mean | Stdev |
6_H61-28_O4-6 | 5.846 | 0.420 |
| Mean | Stdev |
6_N1-28_H3-6 | 3.452 | 0.346 |
| Mean | Stdev |
7_H61-27_O4-7 | 6.177 | 0.420 |
| Mean | Stdev |
7_N1-27_H3-7 | 3.896 | 0.493 |
| Mean | Stdev |
8_H61-26_O4-8 | 6.630 | 0.486 |
| Mean | Stdev |
8_N1-26_H3-8 | 3.962 | 0.441 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
6 | N1-H3_6-28 | 3.4517 | 0.3458 |
6 | H61-O4_6-28 | 5.8458 | 0.4198 |
7 | N1-H3_7-27 | 3.8959 | 0.4927 |
7 | H61-O4_7-27 | 6.1772 | 0.4198 |
8 | N1-H3_8-26 | 3.9620 | 0.4413 |
8 | H61-O4_8-26 | 6.6305 | 0.4862 |
10 | H3-N1_10-24 | 5.2306 | 0.8278 |
10 | O4-H61_10-24 | 6.7682 | 0.8327 |
11 | H3-N1_11-23 | 3.4454 | 0.2952 |
11 | O4-H61_11-23 | 6.0077 | 0.4061 |
12 | H3-N1_12-22 | 3.4710 | 0.3083 |
12 | O4-H61_12-22 | 6.0136 | 0.4168 |