Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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5' |
C |
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G |
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C |
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A |
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A |
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A |
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T |
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T |
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T |
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G |
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C |
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G |
3' |
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3' |
G |
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C |
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G |
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T |
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T |
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T |
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A |
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A |
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A |
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C |
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G |
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5' |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 3.354 | 2.684 |
| Mean | Stdev |
1_N3-24_H1-1 | 3.229 | 2.545 |
| Mean | Stdev |
1_O2-24_H21-1 | 3.169 | 2.589 |
| Mean | Stdev |
10_H1-15_N3-10 | 1.979 | 0.098 |
| Mean | Stdev |
10_H21-15_O2-10 | 1.901 | 0.127 |
| Mean | Stdev |
10_O6-15_H41-10 | 1.958 | 0.163 |
| Mean | Stdev |
11_H41-14_O6-11 | 1.945 | 0.147 |
| Mean | Stdev |
11_N3-14_H1-11 | 1.966 | 0.094 |
| Mean | Stdev |
11_O2-14_H21-11 | 1.895 | 0.125 |
| Mean | Stdev |
12_H1-13_N3-12 | 3.271 | 3.042 |
| Mean | Stdev |
12_H21-13_O2-12 | 3.099 | 2.685 |
| Mean | Stdev |
12_O6-13_H41-12 | 3.542 | 3.659 |
| Mean | Stdev |
2_H1-23_N3-2 | 1.968 | 0.092 |
| Mean | Stdev |
2_H21-23_O2-2 | 1.892 | 0.122 |
| Mean | Stdev |
2_O6-23_H41-2 | 1.947 | 0.147 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.964 | 0.161 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.974 | 0.094 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.890 | 0.120 |
| Mean | Stdev |
4_H61-21_O4-4 | 2.033 | 0.203 |
| Mean | Stdev |
4_N1-21_H3-4 | 1.960 | 0.112 |
| Mean | Stdev |
5_H61-20_O4-5 | 2.089 | 0.233 |
| Mean | Stdev |
5_N1-20_H3-5 | 1.934 | 0.106 |
| Mean | Stdev |
6_H61-19_O4-6 | 2.076 | 0.202 |
| Mean | Stdev |
6_N1-19_H3-6 | 1.978 | 0.116 |
| Mean | Stdev |
7_H3-18_N1-7 | 1.968 | 0.108 |
| Mean | Stdev |
7_O4-18_H61-7 | 2.007 | 0.178 |
| Mean | Stdev |
8_H3-17_N1-8 | 1.941 | 0.111 |
| Mean | Stdev |
8_O4-17_H61-8 | 2.071 | 0.228 |
| Mean | Stdev |
9_H3-16_N1-9 | 1.957 | 0.115 |
| Mean | Stdev |
9_O4-16_H61-9 | 2.076 | 0.235 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 3.3540 | 2.6845 |
1 | N3-H1_1-24 | 3.2289 | 2.5452 |
1 | O2-H21_1-24 | 3.1693 | 2.5892 |
2 | O6-H41_2-23 | 1.9474 | 0.1472 |
2 | H1-N3_2-23 | 1.9684 | 0.0917 |
2 | H21-O2_2-23 | 1.8919 | 0.1222 |
3 | H41-O6_3-22 | 1.9642 | 0.1609 |
3 | N3-H1_3-22 | 1.9741 | 0.0939 |
3 | O2-H21_3-22 | 1.8900 | 0.1203 |
4 | N1-H3_4-21 | 1.9605 | 0.1122 |
4 | H61-O4_4-21 | 2.0325 | 0.2027 |
5 | N1-H3_5-20 | 1.9342 | 0.1058 |
5 | H61-O4_5-20 | 2.0888 | 0.2326 |
6 | N1-H3_6-19 | 1.9782 | 0.1161 |
6 | H61-O4_6-19 | 2.0761 | 0.2024 |
7 | H3-N1_7-18 | 1.9684 | 0.1076 |
7 | O4-H61_7-18 | 2.0067 | 0.1778 |
8 | H3-N1_8-17 | 1.9408 | 0.1108 |
8 | O4-H61_8-17 | 2.0709 | 0.2284 |
9 | H3-N1_9-16 | 1.9574 | 0.1146 |
9 | O4-H61_9-16 | 2.0765 | 0.2347 |
10 | O6-H41_10-15 | 1.9582 | 0.1632 |
10 | H1-N3_10-15 | 1.9788 | 0.0976 |
10 | H21-O2_10-15 | 1.9013 | 0.1267 |
11 | H41-O6_11-14 | 1.9453 | 0.1473 |
11 | N3-H1_11-14 | 1.9660 | 0.0939 |
11 | O2-H21_11-14 | 1.8950 | 0.1254 |
12 | O6-H41_12-13 | 3.5417 | 3.6586 |
12 | H1-N3_12-13 | 3.2708 | 3.0422 |
12 | H21-O2_12-13 | 3.0985 | 2.6848 |