Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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5' |
C |
- |
T |
- |
A |
- |
C |
- |
A |
- |
C |
- |
G |
- |
G |
3' |
|
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
3' |
G |
- |
A |
- |
U |
- |
G |
- |
U |
- |
G |
- |
C |
- |
C |
5' |
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16 |
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15 |
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14 |
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13 |
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12 |
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11 |
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10 |
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9 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-16_O6-1 | 2.044 | 0.710 |
| Mean | Stdev |
1_N3-16_H1-1 | 2.052 | 0.546 |
| Mean | Stdev |
1_O2-16_H21-1 | 2.009 | 0.589 |
| Mean | Stdev |
2_H3-15_N1-2 | 1.957 | 0.114 |
| Mean | Stdev |
2_O4-15_H61-2 | 2.091 | 0.266 |
| Mean | Stdev |
3_H61-14_O4-3 | 2.040 | 0.263 |
| Mean | Stdev |
3_N1-14_H3-3 | 1.974 | 0.176 |
| Mean | Stdev |
4_H41-13_O6-4 | 2.023 | 0.283 |
| Mean | Stdev |
4_N3-13_H1-4 | 1.986 | 0.137 |
| Mean | Stdev |
4_O2-13_H21-4 | 1.889 | 0.124 |
| Mean | Stdev |
5_H61-12_O4-5 | 2.070 | 0.545 |
| Mean | Stdev |
5_N1-12_H3-5 | 2.026 | 0.497 |
| Mean | Stdev |
6_H41-11_O6-6 | 2.022 | 0.282 |
| Mean | Stdev |
6_N3-11_H1-6 | 1.975 | 0.135 |
| Mean | Stdev |
6_O2-11_H21-6 | 1.869 | 0.120 |
| Mean | Stdev |
7_H1-10_N3-7 | 1.972 | 0.235 |
| Mean | Stdev |
7_H21-10_O2-7 | 1.892 | 0.158 |
| Mean | Stdev |
7_O6-10_H41-7 | 2.001 | 0.458 |
| Mean | Stdev |
8_H1-9_N3-8 | 2.090 | 0.676 |
| Mean | Stdev |
8_H21-9_O2-8 | 2.045 | 0.665 |
| Mean | Stdev |
8_O6-9_H41-8 | 2.162 | 0.835 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-16 | 2.0438 | 0.7101 |
1 | N3-H1_1-16 | 2.0522 | 0.5462 |
1 | O2-H21_1-16 | 2.0089 | 0.5893 |
2 | H3-N1_2-15 | 1.9569 | 0.1136 |
2 | O4-H61_2-15 | 2.0913 | 0.2658 |
3 | N1-H3_3-14 | 1.9742 | 0.1764 |
3 | H61-O4_3-14 | 2.0402 | 0.2630 |
4 | H41-O6_4-13 | 2.0226 | 0.2833 |
4 | N3-H1_4-13 | 1.9856 | 0.1367 |
4 | O2-H21_4-13 | 1.8887 | 0.1242 |
5 | N1-H3_5-12 | 2.0264 | 0.4970 |
5 | H61-O4_5-12 | 2.0698 | 0.5447 |
6 | H41-O6_6-11 | 2.0217 | 0.2823 |
6 | N3-H1_6-11 | 1.9751 | 0.1345 |
6 | O2-H21_6-11 | 1.8694 | 0.1203 |
7 | O6-H41_7-10 | 2.0007 | 0.4580 |
7 | H1-N3_7-10 | 1.9725 | 0.2347 |
7 | H21-O2_7-10 | 1.8919 | 0.1584 |
8 | O6-H41_8-9 | 2.1624 | 0.8348 |
8 | H1-N3_8-9 | 2.0900 | 0.6760 |
8 | H21-O2_8-9 | 2.0449 | 0.6652 |