Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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8 |
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9 |
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11 |
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13 |
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14 |
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15 |
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16 |
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17 |
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18 |
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5' |
G |
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C |
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A |
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A |
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C |
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G |
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T |
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G |
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C |
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G |
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G |
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A |
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G |
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C |
3' |
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3' |
C |
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G |
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T |
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T |
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G |
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C |
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A |
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5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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21 |
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19 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 2.003 | 0.118 |
| Mean | Stdev |
1_H21-36_O2-1 | 1.933 | 0.171 |
| Mean | Stdev |
1_O6-36_H41-1 | 2.003 | 0.353 |
| Mean | Stdev |
10_H3-27_N1-10 | 1.955 | 0.116 |
| Mean | Stdev |
10_O4-27_H61-10 | 2.036 | 0.227 |
| Mean | Stdev |
11_H61-26_O4-11 | 2.030 | 0.205 |
| Mean | Stdev |
11_N1-26_H3-11 | 1.988 | 0.126 |
| Mean | Stdev |
12_H3-25_N1-12 | 1.991 | 0.170 |
| Mean | Stdev |
12_O4-25_H61-12 | 2.014 | 0.225 |
| Mean | Stdev |
13_H1-24_N3-13 | 1.968 | 0.097 |
| Mean | Stdev |
13_H21-24_O2-13 | 1.885 | 0.120 |
| Mean | Stdev |
13_O6-24_H41-13 | 1.960 | 0.166 |
| Mean | Stdev |
14_H1-23_N3-14 | 1.980 | 0.104 |
| Mean | Stdev |
14_H21-23_O2-14 | 1.926 | 0.141 |
| Mean | Stdev |
14_O6-23_H41-14 | 1.964 | 0.167 |
| Mean | Stdev |
15_H61-22_O4-15 | 2.001 | 0.193 |
| Mean | Stdev |
15_N1-22_H3-15 | 1.981 | 0.119 |
| Mean | Stdev |
16_H61-21_O4-16 | 2.022 | 0.203 |
| Mean | Stdev |
16_N1-21_H3-16 | 1.945 | 0.107 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.964 | 0.095 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.892 | 0.124 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.964 | 0.160 |
| Mean | Stdev |
18_H41-19_O6-18 | 2.009 | 0.280 |
| Mean | Stdev |
18_N3-19_H1-18 | 2.005 | 0.177 |
| Mean | Stdev |
18_O2-19_H21-18 | 1.918 | 0.182 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.960 | 0.150 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.979 | 0.096 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.901 | 0.124 |
| Mean | Stdev |
3_H61-34_O4-3 | 1.998 | 0.232 |
| Mean | Stdev |
3_N1-34_H3-3 | 1.960 | 0.147 |
| Mean | Stdev |
4_H61-33_O4-4 | 1.981 | 0.173 |
| Mean | Stdev |
4_N1-33_H3-4 | 1.976 | 0.122 |
| Mean | Stdev |
5_H41-32_O6-5 | 1.984 | 0.162 |
| Mean | Stdev |
5_N3-32_H1-5 | 1.967 | 0.092 |
| Mean | Stdev |
5_O2-32_H21-5 | 1.885 | 0.121 |
| Mean | Stdev |
6_H1-31_N3-6 | 1.978 | 0.098 |
| Mean | Stdev |
6_H21-31_O2-6 | 1.873 | 0.114 |
| Mean | Stdev |
6_O6-31_H41-6 | 1.980 | 0.165 |
| Mean | Stdev |
7_H3-30_N1-7 | 1.983 | 0.120 |
| Mean | Stdev |
7_O4-30_H61-7 | 1.979 | 0.186 |
| Mean | Stdev |
8_H1-29_N3-8 | 1.968 | 0.093 |
| Mean | Stdev |
8_H21-29_O2-8 | 1.892 | 0.122 |
| Mean | Stdev |
8_O6-29_H41-8 | 1.966 | 0.163 |
| Mean | Stdev |
9_H41-28_O6-9 | 1.978 | 0.162 |
| Mean | Stdev |
9_N3-28_H1-9 | 1.974 | 0.095 |
| Mean | Stdev |
9_O2-28_H21-9 | 1.909 | 0.128 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 2.0026 | 0.3528 |
1 | H1-N3_1-36 | 2.0027 | 0.1185 |
1 | H21-O2_1-36 | 1.9334 | 0.1708 |
2 | H41-O6_2-35 | 1.9604 | 0.1503 |
2 | N3-H1_2-35 | 1.9790 | 0.0964 |
2 | O2-H21_2-35 | 1.9015 | 0.1238 |
3 | N1-H3_3-34 | 1.9604 | 0.1474 |
3 | H61-O4_3-34 | 1.9984 | 0.2320 |
4 | N1-H3_4-33 | 1.9763 | 0.1217 |
4 | H61-O4_4-33 | 1.9807 | 0.1730 |
5 | H41-O6_5-32 | 1.9843 | 0.1617 |
5 | N3-H1_5-32 | 1.9667 | 0.0922 |
5 | O2-H21_5-32 | 1.8850 | 0.1213 |
6 | O6-H41_6-31 | 1.9796 | 0.1648 |
6 | H1-N3_6-31 | 1.9779 | 0.0975 |
6 | H21-O2_6-31 | 1.8730 | 0.1137 |
7 | H3-N1_7-30 | 1.9827 | 0.1200 |
7 | O4-H61_7-30 | 1.9789 | 0.1863 |
8 | O6-H41_8-29 | 1.9656 | 0.1633 |
8 | H1-N3_8-29 | 1.9680 | 0.0931 |
8 | H21-O2_8-29 | 1.8923 | 0.1223 |
9 | H41-O6_9-28 | 1.9780 | 0.1624 |
9 | N3-H1_9-28 | 1.9745 | 0.0948 |
9 | O2-H21_9-28 | 1.9094 | 0.1284 |
10 | H3-N1_10-27 | 1.9548 | 0.1158 |
10 | O4-H61_10-27 | 2.0356 | 0.2267 |
11 | N1-H3_11-26 | 1.9879 | 0.1260 |
11 | H61-O4_11-26 | 2.0301 | 0.2051 |
12 | H3-N1_12-25 | 1.9912 | 0.1697 |
12 | O4-H61_12-25 | 2.0140 | 0.2245 |
13 | O6-H41_13-24 | 1.9602 | 0.1657 |
13 | H1-N3_13-24 | 1.9676 | 0.0965 |
13 | H21-O2_13-24 | 1.8850 | 0.1201 |
14 | O6-H41_14-23 | 1.9645 | 0.1671 |
14 | H1-N3_14-23 | 1.9801 | 0.1036 |
14 | H21-O2_14-23 | 1.9263 | 0.1411 |
15 | N1-H3_15-22 | 1.9806 | 0.1195 |
15 | H61-O4_15-22 | 2.0013 | 0.1929 |
16 | N1-H3_16-21 | 1.9452 | 0.1072 |
16 | H61-O4_16-21 | 2.0224 | 0.2025 |
17 | O6-H41_17-20 | 1.9640 | 0.1599 |
17 | H1-N3_17-20 | 1.9638 | 0.0949 |
17 | H21-O2_17-20 | 1.8920 | 0.1238 |
18 | H41-O6_18-19 | 2.0090 | 0.2799 |
18 | N3-H1_18-19 | 2.0050 | 0.1773 |
18 | O2-H21_18-19 | 1.9182 | 0.1816 |