Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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5' |
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3' |
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3' |
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5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 2.054 | 0.496 |
| Mean | Stdev |
1_H21-36_O2-1 | 2.016 | 0.853 |
| Mean | Stdev |
1_O6-36_H41-1 | 2.015 | 0.384 |
| Mean | Stdev |
10_H41-27_O6-10 | 1.986 | 0.172 |
| Mean | Stdev |
10_N3-27_H1-10 | 1.986 | 0.103 |
| Mean | Stdev |
10_O2-27_H21-10 | 1.894 | 0.123 |
| Mean | Stdev |
11_H1-26_N3-11 | 1.959 | 0.091 |
| Mean | Stdev |
11_H21-26_O2-11 | 1.888 | 0.123 |
| Mean | Stdev |
11_O6-26_H41-11 | 1.956 | 0.152 |
| Mean | Stdev |
12_H61-25_O4-12 | 1.992 | 0.178 |
| Mean | Stdev |
12_N1-25_H3-12 | 2.002 | 0.130 |
| Mean | Stdev |
13_H3-24_N1-13 | 1.981 | 0.121 |
| Mean | Stdev |
13_O4-24_H61-13 | 2.005 | 0.194 |
| Mean | Stdev |
14_H1-23_N3-14 | 1.970 | 0.092 |
| Mean | Stdev |
14_H21-23_O2-14 | 1.892 | 0.121 |
| Mean | Stdev |
14_O6-23_H41-14 | 1.953 | 0.149 |
| Mean | Stdev |
15_H41-22_O6-15 | 1.957 | 0.154 |
| Mean | Stdev |
15_N3-22_H1-15 | 1.975 | 0.095 |
| Mean | Stdev |
15_O2-22_H21-15 | 1.907 | 0.127 |
| Mean | Stdev |
16_H61-21_O4-16 | 2.027 | 0.206 |
| Mean | Stdev |
16_N1-21_H3-16 | 1.952 | 0.112 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.969 | 0.095 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.905 | 0.130 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.982 | 0.167 |
| Mean | Stdev |
18_H41-19_O6-18 | 2.474 | 2.191 |
| Mean | Stdev |
18_N3-19_H1-18 | 2.458 | 2.198 |
| Mean | Stdev |
18_O2-19_H21-18 | 2.455 | 2.563 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.978 | 0.168 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.972 | 0.095 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.905 | 0.132 |
| Mean | Stdev |
3_H3-34_N1-3 | 1.964 | 0.118 |
| Mean | Stdev |
3_O4-34_H61-3 | 1.997 | 0.191 |
| Mean | Stdev |
4_H1-33_N3-4 | 1.971 | 0.093 |
| Mean | Stdev |
4_H21-33_O2-4 | 1.889 | 0.125 |
| Mean | Stdev |
4_O6-33_H41-4 | 1.975 | 0.159 |
| Mean | Stdev |
5_H61-32_O4-5 | 1.993 | 0.175 |
| Mean | Stdev |
5_N1-32_H3-5 | 2.002 | 0.129 |
| Mean | Stdev |
6_H3-31_N1-6 | 2.008 | 0.346 |
| Mean | Stdev |
6_O4-31_H61-6 | 2.061 | 0.389 |
| Mean | Stdev |
7_H61-30_O4-7 | 2.039 | 0.217 |
| Mean | Stdev |
7_N1-30_H3-7 | 1.976 | 0.119 |
| Mean | Stdev |
8_H3-29_N1-8 | 1.990 | 0.177 |
| Mean | Stdev |
8_O4-29_H61-8 | 2.038 | 0.249 |
| Mean | Stdev |
9_H61-28_O4-9 | 2.000 | 0.196 |
| Mean | Stdev |
9_N1-28_H3-9 | 1.979 | 0.125 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 2.0147 | 0.3841 |
1 | H1-N3_1-36 | 2.0540 | 0.4964 |
1 | H21-O2_1-36 | 2.0162 | 0.8525 |
2 | H41-O6_2-35 | 1.9775 | 0.1680 |
2 | N3-H1_2-35 | 1.9721 | 0.0948 |
2 | O2-H21_2-35 | 1.9045 | 0.1323 |
3 | H3-N1_3-34 | 1.9640 | 0.1182 |
3 | O4-H61_3-34 | 1.9972 | 0.1905 |
4 | O6-H41_4-33 | 1.9748 | 0.1592 |
4 | H1-N3_4-33 | 1.9709 | 0.0930 |
4 | H21-O2_4-33 | 1.8887 | 0.1254 |
5 | N1-H3_5-32 | 2.0016 | 0.1292 |
5 | H61-O4_5-32 | 1.9933 | 0.1749 |
6 | H3-N1_6-31 | 2.0079 | 0.3461 |
6 | O4-H61_6-31 | 2.0610 | 0.3888 |
7 | N1-H3_7-30 | 1.9762 | 0.1192 |
7 | H61-O4_7-30 | 2.0392 | 0.2166 |
8 | H3-N1_8-29 | 1.9900 | 0.1769 |
8 | O4-H61_8-29 | 2.0375 | 0.2493 |
9 | N1-H3_9-28 | 1.9788 | 0.1252 |
9 | H61-O4_9-28 | 2.0002 | 0.1963 |
10 | H41-O6_10-27 | 1.9860 | 0.1720 |
10 | N3-H1_10-27 | 1.9859 | 0.1028 |
10 | O2-H21_10-27 | 1.8936 | 0.1231 |
11 | O6-H41_11-26 | 1.9565 | 0.1518 |
11 | H1-N3_11-26 | 1.9587 | 0.0906 |
11 | H21-O2_11-26 | 1.8881 | 0.1233 |
12 | N1-H3_12-25 | 2.0016 | 0.1297 |
12 | H61-O4_12-25 | 1.9922 | 0.1785 |
13 | H3-N1_13-24 | 1.9809 | 0.1211 |
13 | O4-H61_13-24 | 2.0050 | 0.1935 |
14 | O6-H41_14-23 | 1.9530 | 0.1490 |
14 | H1-N3_14-23 | 1.9702 | 0.0924 |
14 | H21-O2_14-23 | 1.8920 | 0.1209 |
15 | H41-O6_15-22 | 1.9574 | 0.1541 |
15 | N3-H1_15-22 | 1.9751 | 0.0948 |
15 | O2-H21_15-22 | 1.9071 | 0.1272 |
16 | N1-H3_16-21 | 1.9524 | 0.1118 |
16 | H61-O4_16-21 | 2.0266 | 0.2057 |
17 | O6-H41_17-20 | 1.9818 | 0.1666 |
17 | H1-N3_17-20 | 1.9691 | 0.0954 |
17 | H21-O2_17-20 | 1.9053 | 0.1298 |
18 | H41-O6_18-19 | 2.4740 | 2.1910 |
18 | N3-H1_18-19 | 2.4575 | 2.1982 |
18 | O2-H21_18-19 | 2.4553 | 2.5635 |