Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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3 |
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18 |
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5' |
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G |
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3' |
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3' |
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T |
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5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 2.002 | 0.115 |
| Mean | Stdev |
1_H21-36_O2-1 | 1.925 | 0.147 |
| Mean | Stdev |
1_O6-36_H41-1 | 1.988 | 0.217 |
| Mean | Stdev |
10_H61-27_O4-10 | 2.005 | 0.285 |
| Mean | Stdev |
10_N1-27_H3-10 | 1.981 | 0.214 |
| Mean | Stdev |
11_H41-26_O6-11 | 2.004 | 0.404 |
| Mean | Stdev |
11_N3-26_H1-11 | 1.997 | 0.301 |
| Mean | Stdev |
11_O2-26_H21-11 | 1.931 | 0.278 |
| Mean | Stdev |
12_H41-25_O6-12 | 1.969 | 0.167 |
| Mean | Stdev |
12_N3-25_H1-12 | 1.964 | 0.094 |
| Mean | Stdev |
12_O2-25_H21-12 | 1.882 | 0.120 |
| Mean | Stdev |
13_H61-24_O4-13 | 1.995 | 0.187 |
| Mean | Stdev |
13_N1-24_H3-13 | 1.965 | 0.116 |
| Mean | Stdev |
14_H1-23_N3-14 | 1.968 | 0.095 |
| Mean | Stdev |
14_H21-23_O2-14 | 1.903 | 0.129 |
| Mean | Stdev |
14_O6-23_H41-14 | 1.977 | 0.172 |
| Mean | Stdev |
15_H1-22_N3-15 | 1.968 | 0.103 |
| Mean | Stdev |
15_H21-22_O2-15 | 1.914 | 0.134 |
| Mean | Stdev |
15_O6-22_H41-15 | 1.964 | 0.179 |
| Mean | Stdev |
16_H61-21_O4-16 | 2.013 | 0.201 |
| Mean | Stdev |
16_N1-21_H3-16 | 1.967 | 0.118 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.968 | 0.094 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.896 | 0.125 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.971 | 0.161 |
| Mean | Stdev |
18_H41-19_O6-18 | 1.997 | 0.252 |
| Mean | Stdev |
18_N3-19_H1-18 | 2.004 | 0.161 |
| Mean | Stdev |
18_O2-19_H21-18 | 1.922 | 0.188 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.964 | 0.154 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.978 | 0.096 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.898 | 0.122 |
| Mean | Stdev |
3_H61-34_O4-3 | 1.998 | 0.195 |
| Mean | Stdev |
3_N1-34_H3-3 | 1.963 | 0.120 |
| Mean | Stdev |
4_H61-33_O4-4 | 2.012 | 0.184 |
| Mean | Stdev |
4_N1-33_H3-4 | 1.993 | 0.127 |
| Mean | Stdev |
5_H3-32_N1-5 | 2.002 | 0.219 |
| Mean | Stdev |
5_O4-32_H61-5 | 2.041 | 0.304 |
| Mean | Stdev |
6_H61-31_O4-6 | 2.044 | 0.217 |
| Mean | Stdev |
6_N1-31_H3-6 | 1.960 | 0.112 |
| Mean | Stdev |
7_H61-30_O4-7 | 2.027 | 0.202 |
| Mean | Stdev |
7_N1-30_H3-7 | 1.945 | 0.107 |
| Mean | Stdev |
8_H1-29_N3-8 | 1.966 | 0.096 |
| Mean | Stdev |
8_H21-29_O2-8 | 1.893 | 0.126 |
| Mean | Stdev |
8_O6-29_H41-8 | 1.989 | 0.166 |
| Mean | Stdev |
9_H3-28_N1-9 | 1.965 | 0.115 |
| Mean | Stdev |
9_O4-28_H61-9 | 2.013 | 0.207 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 1.9884 | 0.2166 |
1 | H1-N3_1-36 | 2.0020 | 0.1154 |
1 | H21-O2_1-36 | 1.9248 | 0.1471 |
2 | H41-O6_2-35 | 1.9644 | 0.1540 |
2 | N3-H1_2-35 | 1.9779 | 0.0955 |
2 | O2-H21_2-35 | 1.8980 | 0.1217 |
3 | N1-H3_3-34 | 1.9631 | 0.1202 |
3 | H61-O4_3-34 | 1.9980 | 0.1950 |
4 | N1-H3_4-33 | 1.9933 | 0.1267 |
4 | H61-O4_4-33 | 2.0120 | 0.1838 |
5 | H3-N1_5-32 | 2.0025 | 0.2187 |
5 | O4-H61_5-32 | 2.0410 | 0.3042 |
6 | N1-H3_6-31 | 1.9597 | 0.1123 |
6 | H61-O4_6-31 | 2.0444 | 0.2171 |
7 | N1-H3_7-30 | 1.9448 | 0.1072 |
7 | H61-O4_7-30 | 2.0272 | 0.2015 |
8 | O6-H41_8-29 | 1.9889 | 0.1657 |
8 | H1-N3_8-29 | 1.9661 | 0.0960 |
8 | H21-O2_8-29 | 1.8935 | 0.1255 |
9 | H3-N1_9-28 | 1.9651 | 0.1154 |
9 | O4-H61_9-28 | 2.0134 | 0.2067 |
10 | N1-H3_10-27 | 1.9812 | 0.2137 |
10 | H61-O4_10-27 | 2.0054 | 0.2848 |
11 | H41-O6_11-26 | 2.0036 | 0.4041 |
11 | N3-H1_11-26 | 1.9967 | 0.3009 |
11 | O2-H21_11-26 | 1.9311 | 0.2780 |
12 | H41-O6_12-25 | 1.9694 | 0.1672 |
12 | N3-H1_12-25 | 1.9637 | 0.0941 |
12 | O2-H21_12-25 | 1.8821 | 0.1199 |
13 | N1-H3_13-24 | 1.9651 | 0.1160 |
13 | H61-O4_13-24 | 1.9946 | 0.1869 |
14 | O6-H41_14-23 | 1.9771 | 0.1718 |
14 | H1-N3_14-23 | 1.9678 | 0.0947 |
14 | H21-O2_14-23 | 1.9031 | 0.1293 |
15 | O6-H41_15-22 | 1.9639 | 0.1787 |
15 | H1-N3_15-22 | 1.9682 | 0.1027 |
15 | H21-O2_15-22 | 1.9137 | 0.1335 |
16 | N1-H3_16-21 | 1.9671 | 0.1180 |
16 | H61-O4_16-21 | 2.0133 | 0.2007 |
17 | O6-H41_17-20 | 1.9710 | 0.1612 |
17 | H1-N3_17-20 | 1.9679 | 0.0938 |
17 | H21-O2_17-20 | 1.8960 | 0.1254 |
18 | H41-O6_18-19 | 1.9966 | 0.2516 |
18 | N3-H1_18-19 | 2.0039 | 0.1606 |
18 | O2-H21_18-19 | 1.9221 | 0.1880 |