Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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8 |
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9 |
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11 |
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13 |
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14 |
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15 |
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16 |
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17 |
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18 |
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5' |
G |
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C |
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G |
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T |
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T |
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A |
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G |
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A |
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T |
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T |
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A |
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A |
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A |
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T |
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T |
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G |
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C |
3' |
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3' |
C |
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G |
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C |
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A |
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A |
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T |
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C |
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T |
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A |
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A |
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5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 2.032 | 0.520 |
| Mean | Stdev |
1_H21-36_O2-1 | 1.953 | 0.568 |
| Mean | Stdev |
1_O6-36_H41-1 | 2.020 | 0.577 |
| Mean | Stdev |
10_H3-27_N1-10 | 2.040 | 0.582 |
| Mean | Stdev |
10_O4-27_H61-10 | 2.155 | 0.740 |
| Mean | Stdev |
11_H61-26_O4-11 | 2.046 | 0.299 |
| Mean | Stdev |
11_N1-26_H3-11 | 2.016 | 0.343 |
| Mean | Stdev |
12_H61-25_O4-12 | 1.994 | 0.183 |
| Mean | Stdev |
12_N1-25_H3-12 | 1.973 | 0.121 |
| Mean | Stdev |
13_H61-24_O4-13 | 1.988 | 0.174 |
| Mean | Stdev |
13_N1-24_H3-13 | 1.969 | 0.117 |
| Mean | Stdev |
14_H61-23_O4-14 | 2.019 | 0.185 |
| Mean | Stdev |
14_N1-23_H3-14 | 1.973 | 0.116 |
| Mean | Stdev |
15_H3-22_N1-15 | 1.995 | 0.124 |
| Mean | Stdev |
15_O4-22_H61-15 | 2.005 | 0.186 |
| Mean | Stdev |
16_H3-21_N1-16 | 1.962 | 0.120 |
| Mean | Stdev |
16_O4-21_H61-16 | 1.994 | 0.188 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.975 | 0.093 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.898 | 0.125 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.957 | 0.151 |
| Mean | Stdev |
18_H41-19_O6-18 | 2.015 | 0.440 |
| Mean | Stdev |
18_N3-19_H1-18 | 2.007 | 0.154 |
| Mean | Stdev |
18_O2-19_H21-18 | 1.936 | 0.184 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.956 | 0.149 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.965 | 0.091 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.881 | 0.117 |
| Mean | Stdev |
3_H1-34_N3-3 | 1.971 | 0.095 |
| Mean | Stdev |
3_H21-34_O2-3 | 1.881 | 0.117 |
| Mean | Stdev |
3_O6-34_H41-3 | 1.978 | 0.160 |
| Mean | Stdev |
4_H3-33_N1-4 | 1.988 | 0.127 |
| Mean | Stdev |
4_O4-33_H61-4 | 1.983 | 0.175 |
| Mean | Stdev |
5_H3-32_N1-5 | 1.956 | 0.113 |
| Mean | Stdev |
5_O4-32_H61-5 | 2.023 | 0.197 |
| Mean | Stdev |
6_H61-31_O4-6 | 2.025 | 0.274 |
| Mean | Stdev |
6_N1-31_H3-6 | 1.980 | 0.146 |
| Mean | Stdev |
7_H1-30_N3-7 | 1.962 | 0.094 |
| Mean | Stdev |
7_H21-30_O2-7 | 1.914 | 0.134 |
| Mean | Stdev |
7_O6-30_H41-7 | 1.977 | 0.165 |
| Mean | Stdev |
8_H61-29_O4-8 | 2.004 | 0.179 |
| Mean | Stdev |
8_N1-29_H3-8 | 1.989 | 0.121 |
| Mean | Stdev |
9_H3-28_N1-9 | 1.991 | 0.124 |
| Mean | Stdev |
9_O4-28_H61-9 | 2.007 | 0.183 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 2.0204 | 0.5774 |
1 | H1-N3_1-36 | 2.0321 | 0.5204 |
1 | H21-O2_1-36 | 1.9529 | 0.5679 |
2 | H41-O6_2-35 | 1.9562 | 0.1490 |
2 | N3-H1_2-35 | 1.9654 | 0.0908 |
2 | O2-H21_2-35 | 1.8812 | 0.1173 |
3 | O6-H41_3-34 | 1.9782 | 0.1601 |
3 | H1-N3_3-34 | 1.9707 | 0.0947 |
3 | H21-O2_3-34 | 1.8811 | 0.1165 |
4 | H3-N1_4-33 | 1.9882 | 0.1266 |
4 | O4-H61_4-33 | 1.9826 | 0.1751 |
5 | H3-N1_5-32 | 1.9565 | 0.1125 |
5 | O4-H61_5-32 | 2.0231 | 0.1972 |
6 | N1-H3_6-31 | 1.9798 | 0.1465 |
6 | H61-O4_6-31 | 2.0250 | 0.2744 |
7 | O6-H41_7-30 | 1.9774 | 0.1652 |
7 | H1-N3_7-30 | 1.9625 | 0.0942 |
7 | H21-O2_7-30 | 1.9141 | 0.1342 |
8 | N1-H3_8-29 | 1.9887 | 0.1215 |
8 | H61-O4_8-29 | 2.0037 | 0.1794 |
9 | H3-N1_9-28 | 1.9909 | 0.1244 |
9 | O4-H61_9-28 | 2.0068 | 0.1830 |
10 | H3-N1_10-27 | 2.0399 | 0.5820 |
10 | O4-H61_10-27 | 2.1554 | 0.7399 |
11 | N1-H3_11-26 | 2.0164 | 0.3431 |
11 | H61-O4_11-26 | 2.0465 | 0.2995 |
12 | N1-H3_12-25 | 1.9729 | 0.1207 |
12 | H61-O4_12-25 | 1.9939 | 0.1831 |
13 | N1-H3_13-24 | 1.9691 | 0.1169 |
13 | H61-O4_13-24 | 1.9882 | 0.1744 |
14 | N1-H3_14-23 | 1.9733 | 0.1158 |
14 | H61-O4_14-23 | 2.0189 | 0.1849 |
15 | H3-N1_15-22 | 1.9949 | 0.1241 |
15 | O4-H61_15-22 | 2.0052 | 0.1858 |
16 | H3-N1_16-21 | 1.9616 | 0.1202 |
16 | O4-H61_16-21 | 1.9943 | 0.1882 |
17 | O6-H41_17-20 | 1.9573 | 0.1506 |
17 | H1-N3_17-20 | 1.9753 | 0.0932 |
17 | H21-O2_17-20 | 1.8978 | 0.1249 |
18 | H41-O6_18-19 | 2.0155 | 0.4404 |
18 | N3-H1_18-19 | 2.0070 | 0.1545 |
18 | O2-H21_18-19 | 1.9356 | 0.1838 |