Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
|
1 |
|
2 |
|
3 |
|
4 |
|
5 |
|
6 |
|
7 |
|
8 |
|
9 |
|
10 |
|
11 |
|
12 |
|
13 |
|
14 |
|
15 |
|
16 |
|
17 |
|
18 |
|
5' |
G |
- |
C |
- |
T |
- |
G |
- |
G |
- |
C |
- |
A |
- |
T |
- |
G |
- |
A |
- |
A |
- |
G |
- |
C |
- |
G |
- |
A |
- |
C |
- |
G |
- |
C |
3' |
|
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
x |
| |
3' |
C |
- |
G |
- |
A |
- |
C |
- |
C |
- |
G |
- |
T |
- |
A |
- |
C |
- |
T |
- |
T |
- |
C |
- |
G |
- |
C |
- |
T |
- |
G |
- |
C |
- |
G |
5' |
|
36 |
|
35 |
|
34 |
|
33 |
|
32 |
|
31 |
|
30 |
|
29 |
|
28 |
|
27 |
|
26 |
|
25 |
|
24 |
|
23 |
|
22 |
|
21 |
|
20 |
|
19 |
|
Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 1.998 | 0.117 |
| Mean | Stdev |
1_H21-36_O2-1 | 1.922 | 0.152 |
| Mean | Stdev |
1_O6-36_H41-1 | 1.994 | 0.242 |
| Mean | Stdev |
10_H61-27_O4-10 | 1.991 | 0.183 |
| Mean | Stdev |
10_N1-27_H3-10 | 1.987 | 0.125 |
| Mean | Stdev |
11_H61-26_O4-11 | 2.005 | 0.193 |
| Mean | Stdev |
11_N1-26_H3-11 | 1.951 | 0.111 |
| Mean | Stdev |
12_H1-25_N3-12 | 1.970 | 0.093 |
| Mean | Stdev |
12_H21-25_O2-12 | 1.899 | 0.127 |
| Mean | Stdev |
12_O6-25_H41-12 | 1.983 | 0.169 |
| Mean | Stdev |
13_H41-24_O6-13 | 1.960 | 0.153 |
| Mean | Stdev |
13_N3-24_H1-13 | 1.964 | 0.091 |
| Mean | Stdev |
13_O2-24_H21-13 | 1.893 | 0.123 |
| Mean | Stdev |
14_H1-23_N3-14 | 1.964 | 0.091 |
| Mean | Stdev |
14_H21-23_O2-14 | 1.873 | 0.117 |
| Mean | Stdev |
14_O6-23_H41-14 | 1.960 | 0.152 |
| Mean | Stdev |
15_H61-22_O4-15 | 1.946 | 0.157 |
| Mean | Stdev |
15_N1-22_H3-15 | 2.014 | 0.138 |
| Mean | Stdev |
16_H41-21_O6-16 | 1.980 | 0.171 |
| Mean | Stdev |
16_N3-21_H1-16 | 1.974 | 0.099 |
| Mean | Stdev |
16_O2-21_H21-16 | 1.884 | 0.119 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.963 | 0.091 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.883 | 0.124 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.963 | 0.156 |
| Mean | Stdev |
18_H41-19_O6-18 | 2.186 | 1.105 |
| Mean | Stdev |
18_N3-19_H1-18 | 2.120 | 0.818 |
| Mean | Stdev |
18_O2-19_H21-18 | 2.055 | 1.012 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.987 | 0.171 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.971 | 0.093 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.904 | 0.132 |
| Mean | Stdev |
3_H3-34_N1-3 | 1.964 | 0.117 |
| Mean | Stdev |
3_O4-34_H61-3 | 1.994 | 0.180 |
| Mean | Stdev |
4_H1-33_N3-4 | 1.962 | 0.092 |
| Mean | Stdev |
4_H21-33_O2-4 | 1.873 | 0.115 |
| Mean | Stdev |
4_O6-33_H41-4 | 1.968 | 0.165 |
| Mean | Stdev |
5_H1-32_N3-5 | 1.977 | 0.133 |
| Mean | Stdev |
5_H21-32_O2-5 | 1.916 | 0.158 |
| Mean | Stdev |
5_O6-32_H41-5 | 1.971 | 0.194 |
| Mean | Stdev |
6_H41-31_O6-6 | 1.961 | 0.154 |
| Mean | Stdev |
6_N3-31_H1-6 | 1.967 | 0.091 |
| Mean | Stdev |
6_O2-31_H21-6 | 1.887 | 0.118 |
| Mean | Stdev |
7_H61-30_O4-7 | 2.008 | 0.195 |
| Mean | Stdev |
7_N1-30_H3-7 | 1.981 | 0.125 |
| Mean | Stdev |
8_H3-29_N1-8 | 1.989 | 0.124 |
| Mean | Stdev |
8_O4-29_H61-8 | 1.994 | 0.185 |
| Mean | Stdev |
9_H1-28_N3-9 | 1.973 | 0.094 |
| Mean | Stdev |
9_H21-28_O2-9 | 1.882 | 0.120 |
| Mean | Stdev |
9_O6-28_H41-9 | 1.967 | 0.164 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 1.9941 | 0.2416 |
1 | H1-N3_1-36 | 1.9984 | 0.1172 |
1 | H21-O2_1-36 | 1.9221 | 0.1523 |
2 | H41-O6_2-35 | 1.9872 | 0.1713 |
2 | N3-H1_2-35 | 1.9711 | 0.0929 |
2 | O2-H21_2-35 | 1.9036 | 0.1321 |
3 | H3-N1_3-34 | 1.9645 | 0.1169 |
3 | O4-H61_3-34 | 1.9944 | 0.1801 |
4 | O6-H41_4-33 | 1.9683 | 0.1647 |
4 | H1-N3_4-33 | 1.9618 | 0.0925 |
4 | H21-O2_4-33 | 1.8726 | 0.1150 |
5 | O6-H41_5-32 | 1.9708 | 0.1937 |
5 | H1-N3_5-32 | 1.9773 | 0.1331 |
5 | H21-O2_5-32 | 1.9157 | 0.1583 |
6 | H41-O6_6-31 | 1.9614 | 0.1545 |
6 | N3-H1_6-31 | 1.9671 | 0.0913 |
6 | O2-H21_6-31 | 1.8865 | 0.1176 |
7 | N1-H3_7-30 | 1.9813 | 0.1249 |
7 | H61-O4_7-30 | 2.0076 | 0.1953 |
8 | H3-N1_8-29 | 1.9889 | 0.1244 |
8 | O4-H61_8-29 | 1.9942 | 0.1852 |
9 | O6-H41_9-28 | 1.9669 | 0.1636 |
9 | H1-N3_9-28 | 1.9731 | 0.0942 |
9 | H21-O2_9-28 | 1.8817 | 0.1200 |
10 | N1-H3_10-27 | 1.9872 | 0.1253 |
10 | H61-O4_10-27 | 1.9906 | 0.1830 |
11 | N1-H3_11-26 | 1.9513 | 0.1114 |
11 | H61-O4_11-26 | 2.0053 | 0.1929 |
12 | O6-H41_12-25 | 1.9827 | 0.1691 |
12 | H1-N3_12-25 | 1.9704 | 0.0929 |
12 | H21-O2_12-25 | 1.8990 | 0.1265 |
13 | H41-O6_13-24 | 1.9603 | 0.1533 |
13 | N3-H1_13-24 | 1.9640 | 0.0910 |
13 | O2-H21_13-24 | 1.8926 | 0.1226 |
14 | O6-H41_14-23 | 1.9597 | 0.1521 |
14 | H1-N3_14-23 | 1.9635 | 0.0913 |
14 | H21-O2_14-23 | 1.8725 | 0.1175 |
15 | N1-H3_15-22 | 2.0143 | 0.1377 |
15 | H61-O4_15-22 | 1.9465 | 0.1571 |
16 | H41-O6_16-21 | 1.9802 | 0.1711 |
16 | N3-H1_16-21 | 1.9735 | 0.0988 |
16 | O2-H21_16-21 | 1.8836 | 0.1189 |
17 | O6-H41_17-20 | 1.9634 | 0.1557 |
17 | H1-N3_17-20 | 1.9629 | 0.0908 |
17 | H21-O2_17-20 | 1.8829 | 0.1244 |
18 | H41-O6_18-19 | 2.1862 | 1.1051 |
18 | N3-H1_18-19 | 2.1203 | 0.8183 |
18 | O2-H21_18-19 | 2.0548 | 1.0122 |