Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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7 |
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8 |
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11 |
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14 |
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15 |
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16 |
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17 |
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18 |
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5' |
G |
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C |
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T |
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G |
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T |
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G |
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A |
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G |
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G |
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G |
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G |
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C |
3' |
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3' |
C |
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G |
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A |
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A |
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C |
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A |
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T |
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C |
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5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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19 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 2.004 | 0.142 |
| Mean | Stdev |
1_H21-36_O2-1 | 1.920 | 0.153 |
| Mean | Stdev |
1_O6-36_H41-1 | 2.008 | 0.256 |
| Mean | Stdev |
10_H1-27_N3-10 | 1.955 | 0.087 |
| Mean | Stdev |
10_H21-27_O2-10 | 1.866 | 0.110 |
| Mean | Stdev |
10_O6-27_H41-10 | 1.967 | 0.158 |
| Mean | Stdev |
11_H1-26_N3-11 | 1.962 | 0.092 |
| Mean | Stdev |
11_H21-26_O2-11 | 1.906 | 0.130 |
| Mean | Stdev |
11_O6-26_H41-11 | 1.985 | 0.172 |
| Mean | Stdev |
12_H41-25_O6-12 | 2.002 | 0.173 |
| Mean | Stdev |
12_N3-25_H1-12 | 1.968 | 0.095 |
| Mean | Stdev |
12_O2-25_H21-12 | 1.905 | 0.128 |
| Mean | Stdev |
13_H3-24_N1-13 | 1.963 | 0.114 |
| Mean | Stdev |
13_O4-24_H61-13 | 2.027 | 0.211 |
| Mean | Stdev |
14_H61-23_O4-14 | 2.044 | 0.411 |
| Mean | Stdev |
14_N1-23_H3-14 | 2.018 | 0.370 |
| Mean | Stdev |
15_H1-22_N3-15 | 1.973 | 0.093 |
| Mean | Stdev |
15_H21-22_O2-15 | 1.901 | 0.127 |
| Mean | Stdev |
15_O6-22_H41-15 | 1.992 | 0.170 |
| Mean | Stdev |
16_H1-21_N3-16 | 1.954 | 0.093 |
| Mean | Stdev |
16_H21-21_O2-16 | 1.891 | 0.123 |
| Mean | Stdev |
16_O6-21_H41-16 | 1.960 | 0.159 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.966 | 0.100 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.899 | 0.124 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.960 | 0.179 |
| Mean | Stdev |
18_H41-19_O6-18 | 2.730 | 3.194 |
| Mean | Stdev |
18_N3-19_H1-18 | 2.682 | 2.968 |
| Mean | Stdev |
18_O2-19_H21-18 | 2.679 | 3.236 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.975 | 0.166 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.966 | 0.095 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.897 | 0.125 |
| Mean | Stdev |
3_H3-34_N1-3 | 1.947 | 0.108 |
| Mean | Stdev |
3_O4-34_H61-3 | 2.017 | 0.195 |
| Mean | Stdev |
4_H3-33_N1-4 | 1.966 | 0.117 |
| Mean | Stdev |
4_O4-33_H61-4 | 2.012 | 0.195 |
| Mean | Stdev |
5_H1-32_N3-5 | 1.992 | 0.103 |
| Mean | Stdev |
5_H21-32_O2-5 | 1.893 | 0.121 |
| Mean | Stdev |
5_O6-32_H41-5 | 1.983 | 0.166 |
| Mean | Stdev |
6_H3-31_N1-6 | 2.008 | 0.139 |
| Mean | Stdev |
6_O4-31_H61-6 | 1.943 | 0.162 |
| Mean | Stdev |
7_H1-30_N3-7 | 1.968 | 0.095 |
| Mean | Stdev |
7_H21-30_O2-7 | 1.883 | 0.119 |
| Mean | Stdev |
7_O6-30_H41-7 | 1.972 | 0.167 |
| Mean | Stdev |
8_H61-29_O4-8 | 1.951 | 0.161 |
| Mean | Stdev |
8_N1-29_H3-8 | 2.010 | 0.137 |
| Mean | Stdev |
9_H41-28_O6-9 | 1.970 | 0.152 |
| Mean | Stdev |
9_N3-28_H1-9 | 1.980 | 0.097 |
| Mean | Stdev |
9_O2-28_H21-9 | 1.894 | 0.126 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 2.0080 | 0.2562 |
1 | H1-N3_1-36 | 2.0038 | 0.1420 |
1 | H21-O2_1-36 | 1.9200 | 0.1532 |
2 | H41-O6_2-35 | 1.9754 | 0.1661 |
2 | N3-H1_2-35 | 1.9656 | 0.0954 |
2 | O2-H21_2-35 | 1.8971 | 0.1250 |
3 | H3-N1_3-34 | 1.9471 | 0.1085 |
3 | O4-H61_3-34 | 2.0169 | 0.1948 |
4 | H3-N1_4-33 | 1.9657 | 0.1174 |
4 | O4-H61_4-33 | 2.0124 | 0.1952 |
5 | O6-H41_5-32 | 1.9834 | 0.1659 |
5 | H1-N3_5-32 | 1.9915 | 0.1030 |
5 | H21-O2_5-32 | 1.8934 | 0.1208 |
6 | H3-N1_6-31 | 2.0080 | 0.1391 |
6 | O4-H61_6-31 | 1.9431 | 0.1623 |
7 | O6-H41_7-30 | 1.9721 | 0.1666 |
7 | H1-N3_7-30 | 1.9681 | 0.0950 |
7 | H21-O2_7-30 | 1.8831 | 0.1187 |
8 | N1-H3_8-29 | 2.0096 | 0.1371 |
8 | H61-O4_8-29 | 1.9512 | 0.1611 |
9 | H41-O6_9-28 | 1.9697 | 0.1524 |
9 | N3-H1_9-28 | 1.9796 | 0.0974 |
9 | O2-H21_9-28 | 1.8944 | 0.1259 |
10 | O6-H41_10-27 | 1.9669 | 0.1575 |
10 | H1-N3_10-27 | 1.9553 | 0.0870 |
10 | H21-O2_10-27 | 1.8664 | 0.1099 |
11 | O6-H41_11-26 | 1.9848 | 0.1719 |
11 | H1-N3_11-26 | 1.9625 | 0.0917 |
11 | H21-O2_11-26 | 1.9058 | 0.1300 |
12 | H41-O6_12-25 | 2.0021 | 0.1733 |
12 | N3-H1_12-25 | 1.9685 | 0.0951 |
12 | O2-H21_12-25 | 1.9046 | 0.1283 |
13 | H3-N1_13-24 | 1.9630 | 0.1144 |
13 | O4-H61_13-24 | 2.0273 | 0.2115 |
14 | N1-H3_14-23 | 2.0184 | 0.3702 |
14 | H61-O4_14-23 | 2.0444 | 0.4109 |
15 | O6-H41_15-22 | 1.9924 | 0.1704 |
15 | H1-N3_15-22 | 1.9734 | 0.0934 |
15 | H21-O2_15-22 | 1.9005 | 0.1272 |
16 | O6-H41_16-21 | 1.9601 | 0.1587 |
16 | H1-N3_16-21 | 1.9542 | 0.0926 |
16 | H21-O2_16-21 | 1.8915 | 0.1229 |
17 | O6-H41_17-20 | 1.9600 | 0.1791 |
17 | H1-N3_17-20 | 1.9663 | 0.0997 |
17 | H21-O2_17-20 | 1.8988 | 0.1245 |
18 | H41-O6_18-19 | 2.7299 | 3.1937 |
18 | N3-H1_18-19 | 2.6822 | 2.9684 |
18 | O2-H21_18-19 | 2.6788 | 3.2359 |