Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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5' |
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G |
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3' |
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3' |
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5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 2.018 | 0.216 |
| Mean | Stdev |
1_H21-36_O2-1 | 1.935 | 0.179 |
| Mean | Stdev |
1_O6-36_H41-1 | 2.034 | 0.591 |
| Mean | Stdev |
10_H61-27_O4-10 | 1.989 | 0.191 |
| Mean | Stdev |
10_N1-27_H3-10 | 1.976 | 0.121 |
| Mean | Stdev |
11_H41-26_O6-11 | 1.981 | 0.168 |
| Mean | Stdev |
11_N3-26_H1-11 | 1.982 | 0.100 |
| Mean | Stdev |
11_O2-26_H21-11 | 1.920 | 0.138 |
| Mean | Stdev |
12_H41-25_O6-12 | 1.969 | 0.182 |
| Mean | Stdev |
12_N3-25_H1-12 | 1.965 | 0.100 |
| Mean | Stdev |
12_O2-25_H21-12 | 1.881 | 0.119 |
| Mean | Stdev |
13_H61-24_O4-13 | 1.990 | 0.184 |
| Mean | Stdev |
13_N1-24_H3-13 | 1.968 | 0.117 |
| Mean | Stdev |
14_H1-23_N3-14 | 1.969 | 0.096 |
| Mean | Stdev |
14_H21-23_O2-14 | 1.901 | 0.128 |
| Mean | Stdev |
14_O6-23_H41-14 | 1.981 | 0.168 |
| Mean | Stdev |
15_H1-22_N3-15 | 1.970 | 0.094 |
| Mean | Stdev |
15_H21-22_O2-15 | 1.914 | 0.132 |
| Mean | Stdev |
15_O6-22_H41-15 | 1.963 | 0.161 |
| Mean | Stdev |
16_H61-21_O4-16 | 2.016 | 0.207 |
| Mean | Stdev |
16_N1-21_H3-16 | 1.963 | 0.115 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.969 | 0.095 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.897 | 0.127 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.978 | 0.166 |
| Mean | Stdev |
18_H41-19_O6-18 | 2.003 | 0.257 |
| Mean | Stdev |
18_N3-19_H1-18 | 2.004 | 0.138 |
| Mean | Stdev |
18_O2-19_H21-18 | 1.921 | 0.158 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.964 | 0.153 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.978 | 0.095 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.900 | 0.122 |
| Mean | Stdev |
3_H61-34_O4-3 | 1.992 | 0.177 |
| Mean | Stdev |
3_N1-34_H3-3 | 1.961 | 0.114 |
| Mean | Stdev |
4_H61-33_O4-4 | 2.003 | 0.177 |
| Mean | Stdev |
4_N1-33_H3-4 | 1.988 | 0.123 |
| Mean | Stdev |
5_H3-32_N1-5 | 2.000 | 0.129 |
| Mean | Stdev |
5_O4-32_H61-5 | 2.009 | 0.203 |
| Mean | Stdev |
6_H61-31_O4-6 | 2.043 | 0.210 |
| Mean | Stdev |
6_N1-31_H3-6 | 1.957 | 0.111 |
| Mean | Stdev |
7_H61-30_O4-7 | 2.046 | 0.209 |
| Mean | Stdev |
7_N1-30_H3-7 | 1.942 | 0.106 |
| Mean | Stdev |
8_H1-29_N3-8 | 1.972 | 0.098 |
| Mean | Stdev |
8_H21-29_O2-8 | 1.897 | 0.125 |
| Mean | Stdev |
8_O6-29_H41-8 | 1.989 | 0.168 |
| Mean | Stdev |
9_H3-28_N1-9 | 1.972 | 0.121 |
| Mean | Stdev |
9_O4-28_H61-9 | 2.017 | 0.206 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 2.0340 | 0.5913 |
1 | H1-N3_1-36 | 2.0175 | 0.2160 |
1 | H21-O2_1-36 | 1.9350 | 0.1791 |
2 | H41-O6_2-35 | 1.9644 | 0.1533 |
2 | N3-H1_2-35 | 1.9781 | 0.0945 |
2 | O2-H21_2-35 | 1.9002 | 0.1222 |
3 | N1-H3_3-34 | 1.9608 | 0.1140 |
3 | H61-O4_3-34 | 1.9918 | 0.1768 |
4 | N1-H3_4-33 | 1.9876 | 0.1226 |
4 | H61-O4_4-33 | 2.0029 | 0.1773 |
5 | H3-N1_5-32 | 2.0004 | 0.1290 |
5 | O4-H61_5-32 | 2.0089 | 0.2030 |
6 | N1-H3_6-31 | 1.9572 | 0.1105 |
6 | H61-O4_6-31 | 2.0433 | 0.2101 |
7 | N1-H3_7-30 | 1.9420 | 0.1058 |
7 | H61-O4_7-30 | 2.0456 | 0.2095 |
8 | O6-H41_8-29 | 1.9890 | 0.1675 |
8 | H1-N3_8-29 | 1.9721 | 0.0981 |
8 | H21-O2_8-29 | 1.8975 | 0.1246 |
9 | H3-N1_9-28 | 1.9721 | 0.1208 |
9 | O4-H61_9-28 | 2.0174 | 0.2059 |
10 | N1-H3_10-27 | 1.9763 | 0.1206 |
10 | H61-O4_10-27 | 1.9894 | 0.1910 |
11 | H41-O6_11-26 | 1.9810 | 0.1677 |
11 | N3-H1_11-26 | 1.9825 | 0.0996 |
11 | O2-H21_11-26 | 1.9196 | 0.1382 |
12 | H41-O6_12-25 | 1.9689 | 0.1819 |
12 | N3-H1_12-25 | 1.9649 | 0.0996 |
12 | O2-H21_12-25 | 1.8806 | 0.1191 |
13 | N1-H3_13-24 | 1.9678 | 0.1174 |
13 | H61-O4_13-24 | 1.9897 | 0.1841 |
14 | O6-H41_14-23 | 1.9807 | 0.1679 |
14 | H1-N3_14-23 | 1.9690 | 0.0955 |
14 | H21-O2_14-23 | 1.9006 | 0.1275 |
15 | O6-H41_15-22 | 1.9629 | 0.1607 |
15 | H1-N3_15-22 | 1.9705 | 0.0942 |
15 | H21-O2_15-22 | 1.9140 | 0.1323 |
16 | N1-H3_16-21 | 1.9627 | 0.1146 |
16 | H61-O4_16-21 | 2.0162 | 0.2073 |
17 | O6-H41_17-20 | 1.9780 | 0.1658 |
17 | H1-N3_17-20 | 1.9690 | 0.0948 |
17 | H21-O2_17-20 | 1.8975 | 0.1272 |
18 | H41-O6_18-19 | 2.0030 | 0.2566 |
18 | N3-H1_18-19 | 2.0036 | 0.1381 |
18 | O2-H21_18-19 | 1.9212 | 0.1584 |