Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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17 |
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18 |
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5' |
G |
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C |
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G |
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A |
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C |
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C |
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G |
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A |
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A |
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T |
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G |
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T |
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A |
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A |
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T |
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T |
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G |
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C |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
C |
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G |
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C |
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T |
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G |
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G |
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C |
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T |
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T |
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A |
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C |
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A |
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T |
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T |
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A |
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A |
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C |
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G |
5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 2.098 | 0.735 |
| Mean | Stdev |
1_H21-36_O2-1 | 2.050 | 0.976 |
| Mean | Stdev |
1_O6-36_H41-1 | 2.103 | 0.903 |
| Mean | Stdev |
10_H3-27_N1-10 | 1.982 | 0.117 |
| Mean | Stdev |
10_O4-27_H61-10 | 1.995 | 0.176 |
| Mean | Stdev |
11_H1-26_N3-11 | 1.987 | 0.098 |
| Mean | Stdev |
11_H21-26_O2-11 | 1.880 | 0.110 |
| Mean | Stdev |
11_O6-26_H41-11 | 1.980 | 0.162 |
| Mean | Stdev |
12_H3-25_N1-12 | 2.033 | 0.138 |
| Mean | Stdev |
12_O4-25_H61-12 | 1.929 | 0.149 |
| Mean | Stdev |
13_H61-24_O4-13 | 2.009 | 0.190 |
| Mean | Stdev |
13_N1-24_H3-13 | 1.958 | 0.111 |
| Mean | Stdev |
14_H61-23_O4-14 | 1.999 | 0.179 |
| Mean | Stdev |
14_N1-23_H3-14 | 1.994 | 0.123 |
| Mean | Stdev |
15_H3-22_N1-15 | 1.998 | 0.124 |
| Mean | Stdev |
15_O4-22_H61-15 | 2.000 | 0.180 |
| Mean | Stdev |
16_H3-21_N1-16 | 1.963 | 0.114 |
| Mean | Stdev |
16_O4-21_H61-16 | 1.997 | 0.179 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.977 | 0.098 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.898 | 0.124 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.962 | 0.151 |
| Mean | Stdev |
18_H41-19_O6-18 | 2.043 | 0.708 |
| Mean | Stdev |
18_N3-19_H1-18 | 2.049 | 0.601 |
| Mean | Stdev |
18_O2-19_H21-18 | 1.980 | 0.678 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.949 | 0.148 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.972 | 0.091 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.899 | 0.124 |
| Mean | Stdev |
3_H1-34_N3-3 | 1.962 | 0.089 |
| Mean | Stdev |
3_H21-34_O2-3 | 1.881 | 0.119 |
| Mean | Stdev |
3_O6-34_H41-3 | 1.963 | 0.150 |
| Mean | Stdev |
4_H61-33_O4-4 | 1.957 | 0.162 |
| Mean | Stdev |
4_N1-33_H3-4 | 1.990 | 0.122 |
| Mean | Stdev |
5_H41-32_O6-5 | 1.973 | 0.160 |
| Mean | Stdev |
5_N3-32_H1-5 | 1.973 | 0.096 |
| Mean | Stdev |
5_O2-32_H21-5 | 1.919 | 0.135 |
| Mean | Stdev |
6_H41-31_O6-6 | 1.961 | 0.218 |
| Mean | Stdev |
6_N3-31_H1-6 | 1.961 | 0.114 |
| Mean | Stdev |
6_O2-31_H21-6 | 1.878 | 0.117 |
| Mean | Stdev |
7_H1-30_N3-7 | 1.970 | 0.092 |
| Mean | Stdev |
7_H21-30_O2-7 | 1.889 | 0.126 |
| Mean | Stdev |
7_O6-30_H41-7 | 1.968 | 0.159 |
| Mean | Stdev |
8_H61-29_O4-8 | 1.978 | 0.177 |
| Mean | Stdev |
8_N1-29_H3-8 | 1.990 | 0.126 |
| Mean | Stdev |
9_H61-28_O4-9 | 2.011 | 0.185 |
| Mean | Stdev |
9_N1-28_H3-9 | 1.972 | 0.117 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 2.1035 | 0.9028 |
1 | H1-N3_1-36 | 2.0984 | 0.7354 |
1 | H21-O2_1-36 | 2.0495 | 0.9762 |
2 | H41-O6_2-35 | 1.9491 | 0.1478 |
2 | N3-H1_2-35 | 1.9719 | 0.0913 |
2 | O2-H21_2-35 | 1.8990 | 0.1242 |
3 | O6-H41_3-34 | 1.9629 | 0.1497 |
3 | H1-N3_3-34 | 1.9615 | 0.0895 |
3 | H21-O2_3-34 | 1.8813 | 0.1189 |
4 | N1-H3_4-33 | 1.9899 | 0.1220 |
4 | H61-O4_4-33 | 1.9573 | 0.1615 |
5 | H41-O6_5-32 | 1.9728 | 0.1602 |
5 | N3-H1_5-32 | 1.9729 | 0.0958 |
5 | O2-H21_5-32 | 1.9195 | 0.1354 |
6 | H41-O6_6-31 | 1.9611 | 0.2181 |
6 | N3-H1_6-31 | 1.9613 | 0.1136 |
6 | O2-H21_6-31 | 1.8778 | 0.1175 |
7 | O6-H41_7-30 | 1.9677 | 0.1590 |
7 | H1-N3_7-30 | 1.9702 | 0.0919 |
7 | H21-O2_7-30 | 1.8892 | 0.1258 |
8 | N1-H3_8-29 | 1.9899 | 0.1257 |
8 | H61-O4_8-29 | 1.9778 | 0.1769 |
9 | N1-H3_9-28 | 1.9723 | 0.1169 |
9 | H61-O4_9-28 | 2.0109 | 0.1848 |
10 | H3-N1_10-27 | 1.9816 | 0.1173 |
10 | O4-H61_10-27 | 1.9951 | 0.1759 |
11 | O6-H41_11-26 | 1.9797 | 0.1618 |
11 | H1-N3_11-26 | 1.9872 | 0.0979 |
11 | H21-O2_11-26 | 1.8803 | 0.1099 |
12 | H3-N1_12-25 | 2.0333 | 0.1383 |
12 | O4-H61_12-25 | 1.9289 | 0.1487 |
13 | N1-H3_13-24 | 1.9577 | 0.1111 |
13 | H61-O4_13-24 | 2.0092 | 0.1896 |
14 | N1-H3_14-23 | 1.9939 | 0.1233 |
14 | H61-O4_14-23 | 1.9988 | 0.1792 |
15 | H3-N1_15-22 | 1.9981 | 0.1242 |
15 | O4-H61_15-22 | 2.0002 | 0.1798 |
16 | H3-N1_16-21 | 1.9628 | 0.1136 |
16 | O4-H61_16-21 | 1.9966 | 0.1792 |
17 | O6-H41_17-20 | 1.9618 | 0.1515 |
17 | H1-N3_17-20 | 1.9767 | 0.0975 |
17 | H21-O2_17-20 | 1.8979 | 0.1244 |
18 | H41-O6_18-19 | 2.0427 | 0.7078 |
18 | N3-H1_18-19 | 2.0494 | 0.6014 |
18 | O2-H21_18-19 | 1.9796 | 0.6778 |