Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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14 |
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18 |
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5' |
G |
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C |
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G |
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T |
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T |
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A |
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G |
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A |
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A |
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A |
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T |
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G |
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C |
3' |
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3' |
C |
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G |
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C |
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A |
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A |
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T |
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C |
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T |
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A |
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5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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21 |
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19 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 2.001 | 0.115 |
| Mean | Stdev |
1_H21-36_O2-1 | 1.924 | 0.152 |
| Mean | Stdev |
1_O6-36_H41-1 | 1.995 | 0.242 |
| Mean | Stdev |
10_H3-27_N1-10 | 1.961 | 0.115 |
| Mean | Stdev |
10_O4-27_H61-10 | 2.043 | 0.217 |
| Mean | Stdev |
11_H61-26_O4-11 | 2.011 | 0.244 |
| Mean | Stdev |
11_N1-26_H3-11 | 1.982 | 0.146 |
| Mean | Stdev |
12_H61-25_O4-12 | 1.995 | 0.181 |
| Mean | Stdev |
12_N1-25_H3-12 | 1.971 | 0.121 |
| Mean | Stdev |
13_H61-24_O4-13 | 1.994 | 0.178 |
| Mean | Stdev |
13_N1-24_H3-13 | 1.968 | 0.116 |
| Mean | Stdev |
14_H61-23_O4-14 | 2.010 | 0.186 |
| Mean | Stdev |
14_N1-23_H3-14 | 1.977 | 0.118 |
| Mean | Stdev |
15_H3-22_N1-15 | 1.990 | 0.124 |
| Mean | Stdev |
15_O4-22_H61-15 | 2.005 | 0.180 |
| Mean | Stdev |
16_H3-21_N1-16 | 1.960 | 0.114 |
| Mean | Stdev |
16_O4-21_H61-16 | 2.006 | 0.184 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.979 | 0.096 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.896 | 0.124 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.966 | 0.155 |
| Mean | Stdev |
18_H41-19_O6-18 | 2.043 | 0.692 |
| Mean | Stdev |
18_N3-19_H1-18 | 2.055 | 0.648 |
| Mean | Stdev |
18_O2-19_H21-18 | 1.987 | 0.737 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.962 | 0.154 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.963 | 0.091 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.879 | 0.116 |
| Mean | Stdev |
3_H1-34_N3-3 | 1.977 | 0.099 |
| Mean | Stdev |
3_H21-34_O2-3 | 1.887 | 0.123 |
| Mean | Stdev |
3_O6-34_H41-3 | 1.984 | 0.164 |
| Mean | Stdev |
4_H3-33_N1-4 | 2.003 | 0.132 |
| Mean | Stdev |
4_O4-33_H61-4 | 1.964 | 0.168 |
| Mean | Stdev |
5_H3-32_N1-5 | 1.960 | 0.107 |
| Mean | Stdev |
5_O4-32_H61-5 | 1.998 | 0.181 |
| Mean | Stdev |
6_H61-31_O4-6 | 1.960 | 0.190 |
| Mean | Stdev |
6_N1-31_H3-6 | 2.010 | 0.135 |
| Mean | Stdev |
7_H1-30_N3-7 | 1.972 | 0.095 |
| Mean | Stdev |
7_H21-30_O2-7 | 1.906 | 0.129 |
| Mean | Stdev |
7_O6-30_H41-7 | 1.982 | 0.168 |
| Mean | Stdev |
8_H61-29_O4-8 | 2.000 | 0.181 |
| Mean | Stdev |
8_N1-29_H3-8 | 1.983 | 0.121 |
| Mean | Stdev |
9_H3-28_N1-9 | 1.982 | 0.118 |
| Mean | Stdev |
9_O4-28_H61-9 | 2.011 | 0.186 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 1.9950 | 0.2418 |
1 | H1-N3_1-36 | 2.0010 | 0.1152 |
1 | H21-O2_1-36 | 1.9237 | 0.1518 |
2 | H41-O6_2-35 | 1.9622 | 0.1543 |
2 | N3-H1_2-35 | 1.9634 | 0.0909 |
2 | O2-H21_2-35 | 1.8790 | 0.1158 |
3 | O6-H41_3-34 | 1.9841 | 0.1642 |
3 | H1-N3_3-34 | 1.9769 | 0.0988 |
3 | H21-O2_3-34 | 1.8866 | 0.1228 |
4 | H3-N1_4-33 | 2.0028 | 0.1316 |
4 | O4-H61_4-33 | 1.9638 | 0.1677 |
5 | H3-N1_5-32 | 1.9600 | 0.1074 |
5 | O4-H61_5-32 | 1.9983 | 0.1806 |
6 | N1-H3_6-31 | 2.0105 | 0.1351 |
6 | H61-O4_6-31 | 1.9598 | 0.1898 |
7 | O6-H41_7-30 | 1.9823 | 0.1677 |
7 | H1-N3_7-30 | 1.9725 | 0.0946 |
7 | H21-O2_7-30 | 1.9061 | 0.1286 |
8 | N1-H3_8-29 | 1.9834 | 0.1214 |
8 | H61-O4_8-29 | 1.9995 | 0.1815 |
9 | H3-N1_9-28 | 1.9824 | 0.1176 |
9 | O4-H61_9-28 | 2.0112 | 0.1857 |
10 | H3-N1_10-27 | 1.9611 | 0.1146 |
10 | O4-H61_10-27 | 2.0431 | 0.2169 |
11 | N1-H3_11-26 | 1.9821 | 0.1458 |
11 | H61-O4_11-26 | 2.0108 | 0.2445 |
12 | N1-H3_12-25 | 1.9714 | 0.1209 |
12 | H61-O4_12-25 | 1.9954 | 0.1807 |
13 | N1-H3_13-24 | 1.9678 | 0.1163 |
13 | H61-O4_13-24 | 1.9940 | 0.1785 |
14 | N1-H3_14-23 | 1.9767 | 0.1184 |
14 | H61-O4_14-23 | 2.0104 | 0.1859 |
15 | H3-N1_15-22 | 1.9905 | 0.1241 |
15 | O4-H61_15-22 | 2.0045 | 0.1801 |
16 | H3-N1_16-21 | 1.9599 | 0.1144 |
16 | O4-H61_16-21 | 2.0056 | 0.1844 |
17 | O6-H41_17-20 | 1.9662 | 0.1553 |
17 | H1-N3_17-20 | 1.9789 | 0.0963 |
17 | H21-O2_17-20 | 1.8963 | 0.1238 |
18 | H41-O6_18-19 | 2.0429 | 0.6918 |
18 | N3-H1_18-19 | 2.0554 | 0.6483 |
18 | O2-H21_18-19 | 1.9870 | 0.7367 |