Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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8 |
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9 |
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11 |
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16 |
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17 |
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18 |
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5' |
G |
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C |
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A |
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C |
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A |
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A |
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G |
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C |
3' |
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3' |
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G |
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T |
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G |
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T |
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T |
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T |
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5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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21 |
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19 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 5.045 | 4.860 |
| Mean | Stdev |
1_H21-36_O2-1 | 5.424 | 5.496 |
| Mean | Stdev |
1_O6-36_H41-1 | 5.115 | 4.968 |
| Mean | Stdev |
10_H61-27_O4-10 | 1.990 | 0.172 |
| Mean | Stdev |
10_N1-27_H3-10 | 1.972 | 0.118 |
| Mean | Stdev |
11_H61-26_O4-11 | 1.999 | 0.184 |
| Mean | Stdev |
11_N1-26_H3-11 | 1.975 | 0.120 |
| Mean | Stdev |
12_H41-25_O6-12 | 2.009 | 0.210 |
| Mean | Stdev |
12_N3-25_H1-12 | 1.983 | 0.111 |
| Mean | Stdev |
12_O2-25_H21-12 | 1.883 | 0.119 |
| Mean | Stdev |
13_H61-24_O4-13 | 1.998 | 0.181 |
| Mean | Stdev |
13_N1-24_H3-13 | 1.973 | 0.122 |
| Mean | Stdev |
14_H61-23_O4-14 | 1.988 | 0.173 |
| Mean | Stdev |
14_N1-23_H3-14 | 1.975 | 0.122 |
| Mean | Stdev |
15_H61-22_O4-15 | 2.038 | 0.216 |
| Mean | Stdev |
15_N1-22_H3-15 | 1.966 | 0.117 |
| Mean | Stdev |
16_H41-21_O6-16 | 2.011 | 0.231 |
| Mean | Stdev |
16_N3-21_H1-16 | 1.967 | 0.112 |
| Mean | Stdev |
16_O2-21_H21-16 | 1.890 | 0.127 |
| Mean | Stdev |
17_H1-20_N3-17 | 2.010 | 0.246 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.915 | 0.230 |
| Mean | Stdev |
17_O6-20_H41-17 | 2.056 | 0.517 |
| Mean | Stdev |
18_H41-19_O6-18 | 3.600 | 3.619 |
| Mean | Stdev |
18_N3-19_H1-18 | 3.543 | 3.579 |
| Mean | Stdev |
18_O2-19_H21-18 | 3.688 | 4.206 |
| Mean | Stdev |
2_H41-35_O6-2 | 2.291 | 1.483 |
| Mean | Stdev |
2_N3-35_H1-2 | 2.190 | 1.105 |
| Mean | Stdev |
2_O2-35_H21-2 | 2.085 | 0.964 |
| Mean | Stdev |
3_H61-34_O4-3 | 1.992 | 0.233 |
| Mean | Stdev |
3_N1-34_H3-3 | 1.992 | 0.182 |
| Mean | Stdev |
4_H41-33_O6-4 | 1.999 | 0.185 |
| Mean | Stdev |
4_N3-33_H1-4 | 1.990 | 0.106 |
| Mean | Stdev |
4_O2-33_H21-4 | 1.888 | 0.120 |
| Mean | Stdev |
5_H61-32_O4-5 | 1.996 | 0.187 |
| Mean | Stdev |
5_N1-32_H3-5 | 1.979 | 0.125 |
| Mean | Stdev |
6_H61-31_O4-6 | 1.996 | 0.174 |
| Mean | Stdev |
6_N1-31_H3-6 | 1.970 | 0.118 |
| Mean | Stdev |
7_H61-30_O4-7 | 2.001 | 0.183 |
| Mean | Stdev |
7_N1-30_H3-7 | 1.975 | 0.121 |
| Mean | Stdev |
8_H41-29_O6-8 | 2.010 | 0.206 |
| Mean | Stdev |
8_N3-29_H1-8 | 1.985 | 0.109 |
| Mean | Stdev |
8_O2-29_H21-8 | 1.881 | 0.118 |
| Mean | Stdev |
9_H61-28_O4-9 | 1.996 | 0.183 |
| Mean | Stdev |
9_N1-28_H3-9 | 1.971 | 0.118 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 5.1154 | 4.9680 |
1 | H1-N3_1-36 | 5.0449 | 4.8599 |
1 | H21-O2_1-36 | 5.4237 | 5.4960 |
2 | H41-O6_2-35 | 2.2914 | 1.4832 |
2 | N3-H1_2-35 | 2.1896 | 1.1049 |
2 | O2-H21_2-35 | 2.0848 | 0.9635 |
3 | N1-H3_3-34 | 1.9925 | 0.1819 |
3 | H61-O4_3-34 | 1.9915 | 0.2334 |
4 | H41-O6_4-33 | 1.9990 | 0.1849 |
4 | N3-H1_4-33 | 1.9904 | 0.1057 |
4 | O2-H21_4-33 | 1.8876 | 0.1205 |
5 | N1-H3_5-32 | 1.9789 | 0.1246 |
5 | H61-O4_5-32 | 1.9962 | 0.1869 |
6 | N1-H3_6-31 | 1.9703 | 0.1180 |
6 | H61-O4_6-31 | 1.9957 | 0.1745 |
7 | N1-H3_7-30 | 1.9749 | 0.1213 |
7 | H61-O4_7-30 | 2.0013 | 0.1829 |
8 | H41-O6_8-29 | 2.0101 | 0.2056 |
8 | N3-H1_8-29 | 1.9850 | 0.1093 |
8 | O2-H21_8-29 | 1.8815 | 0.1177 |
9 | N1-H3_9-28 | 1.9711 | 0.1182 |
9 | H61-O4_9-28 | 1.9955 | 0.1832 |
10 | N1-H3_10-27 | 1.9720 | 0.1181 |
10 | H61-O4_10-27 | 1.9896 | 0.1724 |
11 | N1-H3_11-26 | 1.9753 | 0.1199 |
11 | H61-O4_11-26 | 1.9989 | 0.1843 |
12 | H41-O6_12-25 | 2.0089 | 0.2103 |
12 | N3-H1_12-25 | 1.9830 | 0.1110 |
12 | O2-H21_12-25 | 1.8831 | 0.1186 |
13 | N1-H3_13-24 | 1.9729 | 0.1216 |
13 | H61-O4_13-24 | 1.9978 | 0.1809 |
14 | N1-H3_14-23 | 1.9747 | 0.1219 |
14 | H61-O4_14-23 | 1.9881 | 0.1728 |
15 | N1-H3_15-22 | 1.9665 | 0.1169 |
15 | H61-O4_15-22 | 2.0383 | 0.2158 |
16 | H41-O6_16-21 | 2.0109 | 0.2307 |
16 | N3-H1_16-21 | 1.9669 | 0.1123 |
16 | O2-H21_16-21 | 1.8901 | 0.1267 |
17 | O6-H41_17-20 | 2.0560 | 0.5166 |
17 | H1-N3_17-20 | 2.0102 | 0.2460 |
17 | H21-O2_17-20 | 1.9155 | 0.2295 |
18 | H41-O6_18-19 | 3.6003 | 3.6193 |
18 | N3-H1_18-19 | 3.5430 | 3.5791 |
18 | O2-H21_18-19 | 3.6878 | 4.2060 |