Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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18 |
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5' |
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C |
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G |
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G |
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G |
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3' |
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3' |
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5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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19 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 2.406 | 1.598 |
| Mean | Stdev |
1_H21-36_O2-1 | 2.406 | 1.904 |
| Mean | Stdev |
1_O6-36_H41-1 | 2.435 | 1.744 |
| Mean | Stdev |
10_H1-27_N3-10 | 1.968 | 0.093 |
| Mean | Stdev |
10_H21-27_O2-10 | 1.905 | 0.132 |
| Mean | Stdev |
10_O6-27_H41-10 | 1.964 | 0.161 |
| Mean | Stdev |
11_H61-26_O4-11 | 2.027 | 0.221 |
| Mean | Stdev |
11_N1-26_H3-11 | 1.967 | 0.122 |
| Mean | Stdev |
12_H1-25_N3-12 | 1.969 | 0.095 |
| Mean | Stdev |
12_H21-25_O2-12 | 1.911 | 0.136 |
| Mean | Stdev |
12_O6-25_H41-12 | 1.963 | 0.159 |
| Mean | Stdev |
13_H61-24_O4-13 | 2.041 | 0.330 |
| Mean | Stdev |
13_N1-24_H3-13 | 1.990 | 0.268 |
| Mean | Stdev |
14_H1-23_N3-14 | 1.968 | 0.092 |
| Mean | Stdev |
14_H21-23_O2-14 | 1.911 | 0.130 |
| Mean | Stdev |
14_O6-23_H41-14 | 1.965 | 0.160 |
| Mean | Stdev |
15_H61-22_O4-15 | 2.036 | 0.228 |
| Mean | Stdev |
15_N1-22_H3-15 | 1.975 | 0.127 |
| Mean | Stdev |
16_H1-21_N3-16 | 1.952 | 0.092 |
| Mean | Stdev |
16_H21-21_O2-16 | 1.886 | 0.119 |
| Mean | Stdev |
16_O6-21_H41-16 | 1.968 | 0.171 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.968 | 0.099 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.895 | 0.126 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.961 | 0.174 |
| Mean | Stdev |
18_H41-19_O6-18 | 2.022 | 0.462 |
| Mean | Stdev |
18_N3-19_H1-18 | 2.016 | 0.389 |
| Mean | Stdev |
18_O2-19_H21-18 | 1.935 | 0.439 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.959 | 0.155 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.976 | 0.094 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.903 | 0.134 |
| Mean | Stdev |
3_H61-34_O4-3 | 2.031 | 0.220 |
| Mean | Stdev |
3_N1-34_H3-3 | 1.967 | 0.123 |
| Mean | Stdev |
4_H1-33_N3-4 | 1.971 | 0.094 |
| Mean | Stdev |
4_H21-33_O2-4 | 1.910 | 0.133 |
| Mean | Stdev |
4_O6-33_H41-4 | 1.972 | 0.165 |
| Mean | Stdev |
5_H61-32_O4-5 | 2.036 | 0.241 |
| Mean | Stdev |
5_N1-32_H3-5 | 1.970 | 0.126 |
| Mean | Stdev |
6_H1-31_N3-6 | 1.964 | 0.095 |
| Mean | Stdev |
6_H21-31_O2-6 | 1.906 | 0.131 |
| Mean | Stdev |
6_O6-31_H41-6 | 1.965 | 0.164 |
| Mean | Stdev |
7_H61-30_O4-7 | 2.030 | 0.226 |
| Mean | Stdev |
7_N1-30_H3-7 | 1.974 | 0.126 |
| Mean | Stdev |
8_H1-29_N3-8 | 1.967 | 0.093 |
| Mean | Stdev |
8_H21-29_O2-8 | 1.910 | 0.132 |
| Mean | Stdev |
8_O6-29_H41-8 | 1.963 | 0.157 |
| Mean | Stdev |
9_H61-28_O4-9 | 2.027 | 0.221 |
| Mean | Stdev |
9_N1-28_H3-9 | 1.971 | 0.125 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 2.4352 | 1.7436 |
1 | H1-N3_1-36 | 2.4063 | 1.5978 |
1 | H21-O2_1-36 | 2.4058 | 1.9040 |
2 | H41-O6_2-35 | 1.9592 | 0.1551 |
2 | N3-H1_2-35 | 1.9759 | 0.0939 |
2 | O2-H21_2-35 | 1.9029 | 0.1339 |
3 | N1-H3_3-34 | 1.9668 | 0.1234 |
3 | H61-O4_3-34 | 2.0311 | 0.2197 |
4 | O6-H41_4-33 | 1.9720 | 0.1647 |
4 | H1-N3_4-33 | 1.9708 | 0.0938 |
4 | H21-O2_4-33 | 1.9103 | 0.1325 |
5 | N1-H3_5-32 | 1.9697 | 0.1258 |
5 | H61-O4_5-32 | 2.0364 | 0.2410 |
6 | O6-H41_6-31 | 1.9652 | 0.1641 |
6 | H1-N3_6-31 | 1.9638 | 0.0950 |
6 | H21-O2_6-31 | 1.9058 | 0.1313 |
7 | N1-H3_7-30 | 1.9743 | 0.1264 |
7 | H61-O4_7-30 | 2.0301 | 0.2264 |
8 | O6-H41_8-29 | 1.9631 | 0.1571 |
8 | H1-N3_8-29 | 1.9671 | 0.0929 |
8 | H21-O2_8-29 | 1.9096 | 0.1319 |
9 | N1-H3_9-28 | 1.9714 | 0.1247 |
9 | H61-O4_9-28 | 2.0267 | 0.2214 |
10 | O6-H41_10-27 | 1.9637 | 0.1608 |
10 | H1-N3_10-27 | 1.9677 | 0.0927 |
10 | H21-O2_10-27 | 1.9052 | 0.1320 |
11 | N1-H3_11-26 | 1.9671 | 0.1224 |
11 | H61-O4_11-26 | 2.0266 | 0.2209 |
12 | O6-H41_12-25 | 1.9629 | 0.1594 |
12 | H1-N3_12-25 | 1.9686 | 0.0951 |
12 | H21-O2_12-25 | 1.9108 | 0.1359 |
13 | N1-H3_13-24 | 1.9900 | 0.2680 |
13 | H61-O4_13-24 | 2.0410 | 0.3301 |
14 | O6-H41_14-23 | 1.9648 | 0.1600 |
14 | H1-N3_14-23 | 1.9679 | 0.0918 |
14 | H21-O2_14-23 | 1.9108 | 0.1299 |
15 | N1-H3_15-22 | 1.9754 | 0.1269 |
15 | H61-O4_15-22 | 2.0358 | 0.2282 |
16 | O6-H41_16-21 | 1.9685 | 0.1712 |
16 | H1-N3_16-21 | 1.9525 | 0.0921 |
16 | H21-O2_16-21 | 1.8859 | 0.1194 |
17 | O6-H41_17-20 | 1.9614 | 0.1738 |
17 | H1-N3_17-20 | 1.9678 | 0.0987 |
17 | H21-O2_17-20 | 1.8951 | 0.1257 |
18 | H41-O6_18-19 | 2.0219 | 0.4619 |
18 | N3-H1_18-19 | 2.0160 | 0.3891 |
18 | O2-H21_18-19 | 1.9346 | 0.4394 |