Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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16 |
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17 |
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18 |
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5' |
G |
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C |
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G |
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T |
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A |
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G |
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G |
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G |
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G |
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G |
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G |
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T |
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G |
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C |
3' |
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3' |
C |
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G |
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C |
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A |
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C |
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C |
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5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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19 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 2.007 | 0.171 |
| Mean | Stdev |
1_H21-36_O2-1 | 1.919 | 0.159 |
| Mean | Stdev |
1_O6-36_H41-1 | 2.011 | 0.340 |
| Mean | Stdev |
10_H1-27_N3-10 | 1.959 | 0.092 |
| Mean | Stdev |
10_H21-27_O2-10 | 1.891 | 0.123 |
| Mean | Stdev |
10_O6-27_H41-10 | 1.995 | 0.179 |
| Mean | Stdev |
11_H1-26_N3-11 | 1.969 | 0.102 |
| Mean | Stdev |
11_H21-26_O2-11 | 1.893 | 0.126 |
| Mean | Stdev |
11_O6-26_H41-11 | 1.987 | 0.186 |
| Mean | Stdev |
12_H3-25_N1-12 | 1.977 | 0.127 |
| Mean | Stdev |
12_O4-25_H61-12 | 1.999 | 0.200 |
| Mean | Stdev |
13_H61-24_O4-13 | 2.074 | 0.257 |
| Mean | Stdev |
13_N1-24_H3-13 | 1.961 | 0.119 |
| Mean | Stdev |
14_H1-23_N3-14 | 1.962 | 0.093 |
| Mean | Stdev |
14_H21-23_O2-14 | 1.897 | 0.129 |
| Mean | Stdev |
14_O6-23_H41-14 | 1.996 | 0.183 |
| Mean | Stdev |
15_H1-22_N3-15 | 1.966 | 0.096 |
| Mean | Stdev |
15_H21-22_O2-15 | 1.887 | 0.118 |
| Mean | Stdev |
15_O6-22_H41-15 | 1.982 | 0.169 |
| Mean | Stdev |
16_H3-21_N1-16 | 1.986 | 0.166 |
| Mean | Stdev |
16_O4-21_H61-16 | 1.984 | 0.205 |
| Mean | Stdev |
17_H1-20_N3-17 | 3.670 | 3.701 |
| Mean | Stdev |
17_H21-20_O2-17 | 3.308 | 3.109 |
| Mean | Stdev |
17_O6-20_H41-17 | 4.302 | 4.733 |
| Mean | Stdev |
18_H41-19_O6-18 | 8.425 | 4.347 |
| Mean | Stdev |
18_N3-19_H1-18 | 7.178 | 3.761 |
| Mean | Stdev |
18_O2-19_H21-18 | 7.085 | 3.881 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.954 | 0.151 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.968 | 0.091 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.900 | 0.126 |
| Mean | Stdev |
3_H1-34_N3-3 | 1.972 | 0.099 |
| Mean | Stdev |
3_H21-34_O2-3 | 1.887 | 0.121 |
| Mean | Stdev |
3_O6-34_H41-3 | 1.983 | 0.172 |
| Mean | Stdev |
4_H3-33_N1-4 | 1.984 | 0.128 |
| Mean | Stdev |
4_O4-33_H61-4 | 2.012 | 0.214 |
| Mean | Stdev |
5_H61-32_O4-5 | 2.069 | 0.259 |
| Mean | Stdev |
5_N1-32_H3-5 | 1.963 | 0.117 |
| Mean | Stdev |
6_H1-31_N3-6 | 1.957 | 0.091 |
| Mean | Stdev |
6_H21-31_O2-6 | 1.892 | 0.123 |
| Mean | Stdev |
6_O6-31_H41-6 | 1.985 | 0.175 |
| Mean | Stdev |
7_H1-30_N3-7 | 1.966 | 0.094 |
| Mean | Stdev |
7_H21-30_O2-7 | 1.891 | 0.125 |
| Mean | Stdev |
7_O6-30_H41-7 | 1.979 | 0.165 |
| Mean | Stdev |
8_H3-29_N1-8 | 1.976 | 0.124 |
| Mean | Stdev |
8_O4-29_H61-8 | 2.000 | 0.198 |
| Mean | Stdev |
9_H61-28_O4-9 | 2.078 | 0.257 |
| Mean | Stdev |
9_N1-28_H3-9 | 1.964 | 0.123 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 2.0109 | 0.3400 |
1 | H1-N3_1-36 | 2.0073 | 0.1711 |
1 | H21-O2_1-36 | 1.9189 | 0.1588 |
2 | H41-O6_2-35 | 1.9545 | 0.1507 |
2 | N3-H1_2-35 | 1.9676 | 0.0913 |
2 | O2-H21_2-35 | 1.8998 | 0.1264 |
3 | O6-H41_3-34 | 1.9828 | 0.1721 |
3 | H1-N3_3-34 | 1.9717 | 0.0987 |
3 | H21-O2_3-34 | 1.8869 | 0.1207 |
4 | H3-N1_4-33 | 1.9838 | 0.1278 |
4 | O4-H61_4-33 | 2.0120 | 0.2140 |
5 | N1-H3_5-32 | 1.9633 | 0.1165 |
5 | H61-O4_5-32 | 2.0694 | 0.2590 |
6 | O6-H41_6-31 | 1.9854 | 0.1746 |
6 | H1-N3_6-31 | 1.9572 | 0.0909 |
6 | H21-O2_6-31 | 1.8922 | 0.1232 |
7 | O6-H41_7-30 | 1.9793 | 0.1647 |
7 | H1-N3_7-30 | 1.9663 | 0.0941 |
7 | H21-O2_7-30 | 1.8913 | 0.1247 |
8 | H3-N1_8-29 | 1.9765 | 0.1239 |
8 | O4-H61_8-29 | 1.9997 | 0.1979 |
9 | N1-H3_9-28 | 1.9636 | 0.1228 |
9 | H61-O4_9-28 | 2.0780 | 0.2568 |
10 | O6-H41_10-27 | 1.9950 | 0.1792 |
10 | H1-N3_10-27 | 1.9592 | 0.0916 |
10 | H21-O2_10-27 | 1.8912 | 0.1235 |
11 | O6-H41_11-26 | 1.9872 | 0.1856 |
11 | H1-N3_11-26 | 1.9692 | 0.1020 |
11 | H21-O2_11-26 | 1.8931 | 0.1258 |
12 | H3-N1_12-25 | 1.9769 | 0.1267 |
12 | O4-H61_12-25 | 1.9988 | 0.2000 |
13 | N1-H3_13-24 | 1.9612 | 0.1186 |
13 | H61-O4_13-24 | 2.0740 | 0.2570 |
14 | O6-H41_14-23 | 1.9963 | 0.1831 |
14 | H1-N3_14-23 | 1.9618 | 0.0930 |
14 | H21-O2_14-23 | 1.8968 | 0.1288 |
15 | O6-H41_15-22 | 1.9819 | 0.1688 |
15 | H1-N3_15-22 | 1.9662 | 0.0955 |
15 | H21-O2_15-22 | 1.8871 | 0.1184 |
16 | H3-N1_16-21 | 1.9857 | 0.1662 |
16 | O4-H61_16-21 | 1.9839 | 0.2053 |
17 | O6-H41_17-20 | 4.3022 | 4.7330 |
17 | H1-N3_17-20 | 3.6702 | 3.7012 |
17 | H21-O2_17-20 | 3.3084 | 3.1092 |
18 | H41-O6_18-19 | 8.4248 | 4.3470 |
18 | N3-H1_18-19 | 7.1779 | 3.7614 |
18 | O2-H21_18-19 | 7.0854 | 3.8813 |