Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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8 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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17 |
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18 |
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5' |
G |
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C |
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C |
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G |
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C |
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G |
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C |
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G |
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C |
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G |
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C |
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G |
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C |
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G |
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C |
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G |
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G |
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C |
3' |
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3' |
C |
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G |
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G |
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C |
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G |
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C |
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G |
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C |
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G |
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C |
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C |
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5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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19 |
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Interactive Sequence (see Help)
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| Mean | Stdev |
1_H1-36_N3-1 | 1.997 | 0.179 |
| Mean | Stdev |
1_H21-36_O2-1 | 1.919 | 0.207 |
| Mean | Stdev |
1_O6-36_H41-1 | 1.994 | 0.266 |
| Mean | Stdev |
10_H1-27_N3-10 | 1.967 | 0.093 |
| Mean | Stdev |
10_H21-27_O2-10 | 1.904 | 0.124 |
| Mean | Stdev |
10_O6-27_H41-10 | 1.954 | 0.156 |
| Mean | Stdev |
11_H41-26_O6-11 | 1.952 | 0.155 |
| Mean | Stdev |
11_N3-26_H1-11 | 1.963 | 0.088 |
| Mean | Stdev |
11_O2-26_H21-11 | 1.906 | 0.126 |
| Mean | Stdev |
12_H1-25_N3-12 | 1.962 | 0.091 |
| Mean | Stdev |
12_H21-25_O2-12 | 1.903 | 0.126 |
| Mean | Stdev |
12_O6-25_H41-12 | 1.955 | 0.154 |
| Mean | Stdev |
13_H41-24_O6-13 | 1.958 | 0.159 |
| Mean | Stdev |
13_N3-24_H1-13 | 1.966 | 0.090 |
| Mean | Stdev |
13_O2-24_H21-13 | 1.902 | 0.124 |
| Mean | Stdev |
14_H1-23_N3-14 | 1.966 | 0.092 |
| Mean | Stdev |
14_H21-23_O2-14 | 1.900 | 0.123 |
| Mean | Stdev |
14_O6-23_H41-14 | 1.956 | 0.159 |
| Mean | Stdev |
15_H41-22_O6-15 | 1.949 | 0.151 |
| Mean | Stdev |
15_N3-22_H1-15 | 1.969 | 0.091 |
| Mean | Stdev |
15_O2-22_H21-15 | 1.907 | 0.123 |
| Mean | Stdev |
16_H1-21_N3-16 | 1.962 | 0.097 |
| Mean | Stdev |
16_H21-21_O2-16 | 1.889 | 0.123 |
| Mean | Stdev |
16_O6-21_H41-16 | 1.976 | 0.181 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.986 | 0.181 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.938 | 0.274 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.985 | 0.264 |
| Mean | Stdev |
18_H41-19_O6-18 | 5.131 | 4.452 |
| Mean | Stdev |
18_N3-19_H1-18 | 5.054 | 4.647 |
| Mean | Stdev |
18_O2-19_H21-18 | 5.485 | 5.503 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.971 | 0.162 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.971 | 0.092 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.918 | 0.137 |
| Mean | Stdev |
3_H41-34_O6-3 | 1.976 | 0.188 |
| Mean | Stdev |
3_N3-34_H1-3 | 1.959 | 0.097 |
| Mean | Stdev |
3_O2-34_H21-3 | 1.880 | 0.117 |
| Mean | Stdev |
4_H1-33_N3-4 | 1.968 | 0.089 |
| Mean | Stdev |
4_H21-33_O2-4 | 1.906 | 0.127 |
| Mean | Stdev |
4_O6-33_H41-4 | 1.952 | 0.154 |
| Mean | Stdev |
5_H41-32_O6-5 | 1.950 | 0.154 |
| Mean | Stdev |
5_N3-32_H1-5 | 1.967 | 0.091 |
| Mean | Stdev |
5_O2-32_H21-5 | 1.904 | 0.126 |
| Mean | Stdev |
6_H1-31_N3-6 | 1.966 | 0.096 |
| Mean | Stdev |
6_H21-31_O2-6 | 1.903 | 0.125 |
| Mean | Stdev |
6_O6-31_H41-6 | 1.958 | 0.164 |
| Mean | Stdev |
7_H41-30_O6-7 | 1.948 | 0.152 |
| Mean | Stdev |
7_N3-30_H1-7 | 1.962 | 0.092 |
| Mean | Stdev |
7_O2-30_H21-7 | 1.903 | 0.126 |
| Mean | Stdev |
8_H1-29_N3-8 | 1.964 | 0.092 |
| Mean | Stdev |
8_H21-29_O2-8 | 1.904 | 0.125 |
| Mean | Stdev |
8_O6-29_H41-8 | 1.952 | 0.159 |
| Mean | Stdev |
9_H41-28_O6-9 | 1.959 | 0.159 |
| Mean | Stdev |
9_N3-28_H1-9 | 1.964 | 0.092 |
| Mean | Stdev |
9_O2-28_H21-9 | 1.902 | 0.126 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 1.9944 | 0.2661 |
1 | H1-N3_1-36 | 1.9971 | 0.1790 |
1 | H21-O2_1-36 | 1.9189 | 0.2074 |
2 | H41-O6_2-35 | 1.9706 | 0.1615 |
2 | N3-H1_2-35 | 1.9710 | 0.0921 |
2 | O2-H21_2-35 | 1.9184 | 0.1368 |
3 | H41-O6_3-34 | 1.9761 | 0.1883 |
3 | N3-H1_3-34 | 1.9592 | 0.0971 |
3 | O2-H21_3-34 | 1.8804 | 0.1171 |
4 | O6-H41_4-33 | 1.9515 | 0.1541 |
4 | H1-N3_4-33 | 1.9680 | 0.0893 |
4 | H21-O2_4-33 | 1.9056 | 0.1274 |
5 | H41-O6_5-32 | 1.9496 | 0.1544 |
5 | N3-H1_5-32 | 1.9668 | 0.0911 |
5 | O2-H21_5-32 | 1.9042 | 0.1261 |
6 | O6-H41_6-31 | 1.9578 | 0.1644 |
6 | H1-N3_6-31 | 1.9664 | 0.0958 |
6 | H21-O2_6-31 | 1.9033 | 0.1251 |
7 | H41-O6_7-30 | 1.9483 | 0.1516 |
7 | N3-H1_7-30 | 1.9618 | 0.0924 |
7 | O2-H21_7-30 | 1.9032 | 0.1260 |
8 | O6-H41_8-29 | 1.9519 | 0.1592 |
8 | H1-N3_8-29 | 1.9644 | 0.0918 |
8 | H21-O2_8-29 | 1.9036 | 0.1252 |
9 | H41-O6_9-28 | 1.9586 | 0.1586 |
9 | N3-H1_9-28 | 1.9636 | 0.0920 |
9 | O2-H21_9-28 | 1.9019 | 0.1257 |
10 | O6-H41_10-27 | 1.9535 | 0.1556 |
10 | H1-N3_10-27 | 1.9674 | 0.0931 |
10 | H21-O2_10-27 | 1.9036 | 0.1242 |
11 | H41-O6_11-26 | 1.9517 | 0.1553 |
11 | N3-H1_11-26 | 1.9632 | 0.0885 |
11 | O2-H21_11-26 | 1.9056 | 0.1263 |
12 | O6-H41_12-25 | 1.9546 | 0.1541 |
12 | H1-N3_12-25 | 1.9622 | 0.0912 |
12 | H21-O2_12-25 | 1.9034 | 0.1260 |
13 | H41-O6_13-24 | 1.9580 | 0.1586 |
13 | N3-H1_13-24 | 1.9662 | 0.0905 |
13 | O2-H21_13-24 | 1.9024 | 0.1239 |
14 | O6-H41_14-23 | 1.9563 | 0.1585 |
14 | H1-N3_14-23 | 1.9658 | 0.0922 |
14 | H21-O2_14-23 | 1.8998 | 0.1234 |
15 | H41-O6_15-22 | 1.9486 | 0.1506 |
15 | N3-H1_15-22 | 1.9692 | 0.0915 |
15 | O2-H21_15-22 | 1.9065 | 0.1232 |
16 | O6-H41_16-21 | 1.9764 | 0.1814 |
16 | H1-N3_16-21 | 1.9621 | 0.0969 |
16 | H21-O2_16-21 | 1.8888 | 0.1235 |
17 | O6-H41_17-20 | 1.9846 | 0.2636 |
17 | H1-N3_17-20 | 1.9860 | 0.1812 |
17 | H21-O2_17-20 | 1.9381 | 0.2742 |
18 | H41-O6_18-19 | 5.1307 | 4.4523 |
18 | N3-H1_18-19 | 5.0538 | 4.6473 |
18 | O2-H21_18-19 | 5.4854 | 5.5035 |