Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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5' |
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3' |
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5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 1.999 | 0.135 |
| Mean | Stdev |
1_H21-36_O2-1 | 1.915 | 0.145 |
| Mean | Stdev |
1_O6-36_H41-1 | 1.999 | 0.256 |
| Mean | Stdev |
10_H61-27_O4-10 | 2.050 | 0.223 |
| Mean | Stdev |
10_N1-27_H3-10 | 1.980 | 0.122 |
| Mean | Stdev |
11_H3-26_N1-11 | 1.980 | 0.128 |
| Mean | Stdev |
11_O4-26_H61-11 | 2.073 | 0.243 |
| Mean | Stdev |
12_H61-25_O4-12 | 2.065 | 0.265 |
| Mean | Stdev |
12_N1-25_H3-12 | 1.962 | 0.122 |
| Mean | Stdev |
13_H1-24_N3-13 | 1.968 | 0.094 |
| Mean | Stdev |
13_H21-24_O2-13 | 1.908 | 0.132 |
| Mean | Stdev |
13_O6-24_H41-13 | 1.964 | 0.160 |
| Mean | Stdev |
14_H61-23_O4-14 | 2.050 | 0.227 |
| Mean | Stdev |
14_N1-23_H3-14 | 1.979 | 0.122 |
| Mean | Stdev |
15_H3-22_N1-15 | 1.984 | 0.126 |
| Mean | Stdev |
15_O4-22_H61-15 | 2.056 | 0.231 |
| Mean | Stdev |
16_H61-21_O4-16 | 2.096 | 0.289 |
| Mean | Stdev |
16_N1-21_H3-16 | 1.958 | 0.120 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.971 | 0.094 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.898 | 0.129 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.969 | 0.158 |
| Mean | Stdev |
18_H41-19_O6-18 | 2.007 | 0.346 |
| Mean | Stdev |
18_N3-19_H1-18 | 2.006 | 0.286 |
| Mean | Stdev |
18_O2-19_H21-18 | 1.925 | 0.322 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.967 | 0.163 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.975 | 0.097 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.907 | 0.129 |
| Mean | Stdev |
3_H3-34_N1-3 | 1.958 | 0.117 |
| Mean | Stdev |
3_O4-34_H61-3 | 2.084 | 0.262 |
| Mean | Stdev |
4_H61-33_O4-4 | 2.056 | 0.256 |
| Mean | Stdev |
4_N1-33_H3-4 | 1.969 | 0.124 |
| Mean | Stdev |
5_H1-32_N3-5 | 1.969 | 0.095 |
| Mean | Stdev |
5_H21-32_O2-5 | 1.912 | 0.135 |
| Mean | Stdev |
5_O6-32_H41-5 | 1.972 | 0.164 |
| Mean | Stdev |
6_H61-31_O4-6 | 2.053 | 0.231 |
| Mean | Stdev |
6_N1-31_H3-6 | 1.983 | 0.131 |
| Mean | Stdev |
7_H3-30_N1-7 | 1.984 | 0.126 |
| Mean | Stdev |
7_O4-30_H61-7 | 2.066 | 0.237 |
| Mean | Stdev |
8_H61-29_O4-8 | 2.065 | 0.259 |
| Mean | Stdev |
8_N1-29_H3-8 | 1.966 | 0.122 |
| Mean | Stdev |
9_H1-28_N3-9 | 1.967 | 0.092 |
| Mean | Stdev |
9_H21-28_O2-9 | 1.904 | 0.130 |
| Mean | Stdev |
9_O6-28_H41-9 | 1.967 | 0.160 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 1.9993 | 0.2561 |
1 | H1-N3_1-36 | 1.9991 | 0.1354 |
1 | H21-O2_1-36 | 1.9149 | 0.1451 |
2 | H41-O6_2-35 | 1.9666 | 0.1631 |
2 | N3-H1_2-35 | 1.9747 | 0.0968 |
2 | O2-H21_2-35 | 1.9074 | 0.1294 |
3 | H3-N1_3-34 | 1.9580 | 0.1173 |
3 | O4-H61_3-34 | 2.0840 | 0.2616 |
4 | N1-H3_4-33 | 1.9688 | 0.1236 |
4 | H61-O4_4-33 | 2.0563 | 0.2557 |
5 | O6-H41_5-32 | 1.9718 | 0.1638 |
5 | H1-N3_5-32 | 1.9688 | 0.0945 |
5 | H21-O2_5-32 | 1.9118 | 0.1351 |
6 | N1-H3_6-31 | 1.9834 | 0.1308 |
6 | H61-O4_6-31 | 2.0527 | 0.2307 |
7 | H3-N1_7-30 | 1.9835 | 0.1259 |
7 | O4-H61_7-30 | 2.0661 | 0.2372 |
8 | N1-H3_8-29 | 1.9656 | 0.1217 |
8 | H61-O4_8-29 | 2.0653 | 0.2585 |
9 | O6-H41_9-28 | 1.9672 | 0.1599 |
9 | H1-N3_9-28 | 1.9667 | 0.0921 |
9 | H21-O2_9-28 | 1.9036 | 0.1299 |
10 | N1-H3_10-27 | 1.9803 | 0.1225 |
10 | H61-O4_10-27 | 2.0495 | 0.2233 |
11 | H3-N1_11-26 | 1.9800 | 0.1275 |
11 | O4-H61_11-26 | 2.0727 | 0.2428 |
12 | N1-H3_12-25 | 1.9616 | 0.1221 |
12 | H61-O4_12-25 | 2.0650 | 0.2654 |
13 | O6-H41_13-24 | 1.9640 | 0.1599 |
13 | H1-N3_13-24 | 1.9676 | 0.0939 |
13 | H21-O2_13-24 | 1.9082 | 0.1317 |
14 | N1-H3_14-23 | 1.9791 | 0.1217 |
14 | H61-O4_14-23 | 2.0504 | 0.2269 |
15 | H3-N1_15-22 | 1.9838 | 0.1264 |
15 | O4-H61_15-22 | 2.0564 | 0.2313 |
16 | N1-H3_16-21 | 1.9583 | 0.1200 |
16 | H61-O4_16-21 | 2.0957 | 0.2887 |
17 | O6-H41_17-20 | 1.9686 | 0.1577 |
17 | H1-N3_17-20 | 1.9707 | 0.0944 |
17 | H21-O2_17-20 | 1.8982 | 0.1294 |
18 | H41-O6_18-19 | 2.0067 | 0.3460 |
18 | N3-H1_18-19 | 2.0061 | 0.2865 |
18 | O2-H21_18-19 | 1.9247 | 0.3216 |