Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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5 |
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14 |
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15 |
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16 |
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17 |
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18 |
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5' |
G |
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C |
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G |
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G |
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G |
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G |
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G |
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G |
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G |
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G |
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G |
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C |
3' |
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3' |
C |
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G |
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C |
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C |
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C |
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C |
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C |
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C |
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C |
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G |
5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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19 |
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Interactive Sequence (see Help)
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| Mean | Stdev |
1_H1-36_N3-1 | 6.050 | 4.827 |
| Mean | Stdev |
1_H21-36_O2-1 | 6.894 | 5.793 |
| Mean | Stdev |
1_O6-36_H41-1 | 5.979 | 4.573 |
| Mean | Stdev |
10_H1-27_N3-10 | 1.972 | 0.093 |
| Mean | Stdev |
10_H21-27_O2-10 | 1.895 | 0.127 |
| Mean | Stdev |
10_O6-27_H41-10 | 1.948 | 0.147 |
| Mean | Stdev |
11_H1-26_N3-11 | 1.972 | 0.092 |
| Mean | Stdev |
11_H21-26_O2-11 | 1.893 | 0.123 |
| Mean | Stdev |
11_O6-26_H41-11 | 1.951 | 0.150 |
| Mean | Stdev |
12_H1-25_N3-12 | 1.974 | 0.095 |
| Mean | Stdev |
12_H21-25_O2-12 | 1.895 | 0.127 |
| Mean | Stdev |
12_O6-25_H41-12 | 1.951 | 0.150 |
| Mean | Stdev |
13_H1-24_N3-13 | 1.973 | 0.094 |
| Mean | Stdev |
13_H21-24_O2-13 | 1.891 | 0.120 |
| Mean | Stdev |
13_O6-24_H41-13 | 1.955 | 0.155 |
| Mean | Stdev |
14_H1-23_N3-14 | 1.973 | 0.093 |
| Mean | Stdev |
14_H21-23_O2-14 | 1.894 | 0.123 |
| Mean | Stdev |
14_O6-23_H41-14 | 1.950 | 0.151 |
| Mean | Stdev |
15_H1-22_N3-15 | 1.972 | 0.097 |
| Mean | Stdev |
15_H21-22_O2-15 | 1.897 | 0.125 |
| Mean | Stdev |
15_O6-22_H41-15 | 1.950 | 0.155 |
| Mean | Stdev |
16_H1-21_N3-16 | 1.964 | 0.093 |
| Mean | Stdev |
16_H21-21_O2-16 | 1.887 | 0.121 |
| Mean | Stdev |
16_O6-21_H41-16 | 1.960 | 0.159 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.974 | 0.096 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.901 | 0.126 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.953 | 0.158 |
| Mean | Stdev |
18_H41-19_O6-18 | 2.000 | 0.232 |
| Mean | Stdev |
18_N3-19_H1-18 | 1.998 | 0.129 |
| Mean | Stdev |
18_O2-19_H21-18 | 1.920 | 0.156 |
| Mean | Stdev |
2_H41-35_O6-2 | 2.477 | 1.085 |
| Mean | Stdev |
2_N3-35_H1-2 | 2.191 | 0.532 |
| Mean | Stdev |
2_O2-35_H21-2 | 2.026 | 0.483 |
| Mean | Stdev |
3_H1-34_N3-3 | 1.963 | 0.090 |
| Mean | Stdev |
3_H21-34_O2-3 | 1.889 | 0.125 |
| Mean | Stdev |
3_O6-34_H41-3 | 1.956 | 0.159 |
| Mean | Stdev |
4_H1-33_N3-4 | 1.968 | 0.097 |
| Mean | Stdev |
4_H21-33_O2-4 | 1.903 | 0.131 |
| Mean | Stdev |
4_O6-33_H41-4 | 1.957 | 0.165 |
| Mean | Stdev |
5_H1-32_N3-5 | 1.969 | 0.093 |
| Mean | Stdev |
5_H21-32_O2-5 | 1.894 | 0.124 |
| Mean | Stdev |
5_O6-32_H41-5 | 1.952 | 0.157 |
| Mean | Stdev |
6_H1-31_N3-6 | 1.972 | 0.096 |
| Mean | Stdev |
6_H21-31_O2-6 | 1.895 | 0.124 |
| Mean | Stdev |
6_O6-31_H41-6 | 1.949 | 0.162 |
| Mean | Stdev |
7_H1-30_N3-7 | 1.973 | 0.095 |
| Mean | Stdev |
7_H21-30_O2-7 | 1.891 | 0.124 |
| Mean | Stdev |
7_O6-30_H41-7 | 1.953 | 0.152 |
| Mean | Stdev |
8_H1-29_N3-8 | 1.972 | 0.091 |
| Mean | Stdev |
8_H21-29_O2-8 | 1.892 | 0.119 |
| Mean | Stdev |
8_O6-29_H41-8 | 1.950 | 0.150 |
| Mean | Stdev |
9_H1-28_N3-9 | 1.975 | 0.096 |
| Mean | Stdev |
9_H21-28_O2-9 | 1.895 | 0.124 |
| Mean | Stdev |
9_O6-28_H41-9 | 1.950 | 0.159 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 5.9789 | 4.5729 |
1 | H1-N3_1-36 | 6.0496 | 4.8275 |
1 | H21-O2_1-36 | 6.8944 | 5.7930 |
2 | H41-O6_2-35 | 2.4774 | 1.0849 |
2 | N3-H1_2-35 | 2.1912 | 0.5320 |
2 | O2-H21_2-35 | 2.0265 | 0.4831 |
3 | O6-H41_3-34 | 1.9562 | 0.1585 |
3 | H1-N3_3-34 | 1.9630 | 0.0901 |
3 | H21-O2_3-34 | 1.8889 | 0.1247 |
4 | O6-H41_4-33 | 1.9572 | 0.1646 |
4 | H1-N3_4-33 | 1.9680 | 0.0971 |
4 | H21-O2_4-33 | 1.9030 | 0.1306 |
5 | O6-H41_5-32 | 1.9523 | 0.1565 |
5 | H1-N3_5-32 | 1.9692 | 0.0930 |
5 | H21-O2_5-32 | 1.8942 | 0.1241 |
6 | O6-H41_6-31 | 1.9488 | 0.1623 |
6 | H1-N3_6-31 | 1.9723 | 0.0955 |
6 | H21-O2_6-31 | 1.8955 | 0.1238 |
7 | O6-H41_7-30 | 1.9529 | 0.1525 |
7 | H1-N3_7-30 | 1.9728 | 0.0946 |
7 | H21-O2_7-30 | 1.8914 | 0.1242 |
8 | O6-H41_8-29 | 1.9502 | 0.1503 |
8 | H1-N3_8-29 | 1.9724 | 0.0909 |
8 | H21-O2_8-29 | 1.8920 | 0.1192 |
9 | O6-H41_9-28 | 1.9501 | 0.1586 |
9 | H1-N3_9-28 | 1.9747 | 0.0960 |
9 | H21-O2_9-28 | 1.8945 | 0.1239 |
10 | O6-H41_10-27 | 1.9482 | 0.1467 |
10 | H1-N3_10-27 | 1.9725 | 0.0926 |
10 | H21-O2_10-27 | 1.8947 | 0.1266 |
11 | O6-H41_11-26 | 1.9510 | 0.1500 |
11 | H1-N3_11-26 | 1.9719 | 0.0921 |
11 | H21-O2_11-26 | 1.8935 | 0.1228 |
12 | O6-H41_12-25 | 1.9511 | 0.1501 |
12 | H1-N3_12-25 | 1.9740 | 0.0954 |
12 | H21-O2_12-25 | 1.8950 | 0.1272 |
13 | O6-H41_13-24 | 1.9552 | 0.1547 |
13 | H1-N3_13-24 | 1.9727 | 0.0940 |
13 | H21-O2_13-24 | 1.8906 | 0.1196 |
14 | O6-H41_14-23 | 1.9497 | 0.1515 |
14 | H1-N3_14-23 | 1.9731 | 0.0933 |
14 | H21-O2_14-23 | 1.8943 | 0.1234 |
15 | O6-H41_15-22 | 1.9498 | 0.1552 |
15 | H1-N3_15-22 | 1.9724 | 0.0969 |
15 | H21-O2_15-22 | 1.8970 | 0.1246 |
16 | O6-H41_16-21 | 1.9605 | 0.1589 |
16 | H1-N3_16-21 | 1.9645 | 0.0926 |
16 | H21-O2_16-21 | 1.8867 | 0.1210 |
17 | O6-H41_17-20 | 1.9531 | 0.1579 |
17 | H1-N3_17-20 | 1.9745 | 0.0964 |
17 | H21-O2_17-20 | 1.9013 | 0.1260 |
18 | H41-O6_18-19 | 2.0000 | 0.2323 |
18 | N3-H1_18-19 | 1.9984 | 0.1292 |
18 | O2-H21_18-19 | 1.9197 | 0.1560 |