Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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16 |
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17 |
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18 |
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5' |
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3' |
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3' |
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A |
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G |
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5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 2.004 | 0.191 |
| Mean | Stdev |
1_H21-36_O2-1 | 1.913 | 0.187 |
| Mean | Stdev |
1_O6-36_H41-1 | 2.017 | 0.314 |
| Mean | Stdev |
10_H1-27_N3-10 | 1.978 | 0.104 |
| Mean | Stdev |
10_H21-27_O2-10 | 1.887 | 0.119 |
| Mean | Stdev |
10_O6-27_H41-10 | 2.000 | 0.185 |
| Mean | Stdev |
11_H3-26_N1-11 | 1.992 | 0.130 |
| Mean | Stdev |
11_O4-26_H61-11 | 1.992 | 0.195 |
| Mean | Stdev |
12_H41-25_O6-12 | 1.972 | 0.161 |
| Mean | Stdev |
12_N3-25_H1-12 | 1.964 | 0.094 |
| Mean | Stdev |
12_O2-25_H21-12 | 1.921 | 0.140 |
| Mean | Stdev |
13_H3-24_N1-13 | 1.973 | 0.212 |
| Mean | Stdev |
13_O4-24_H61-13 | 2.031 | 0.300 |
| Mean | Stdev |
14_H1-23_N3-14 | 1.982 | 0.100 |
| Mean | Stdev |
14_H21-23_O2-14 | 1.893 | 0.122 |
| Mean | Stdev |
14_O6-23_H41-14 | 1.991 | 0.174 |
| Mean | Stdev |
15_H3-22_N1-15 | 2.005 | 0.133 |
| Mean | Stdev |
15_O4-22_H61-15 | 1.965 | 0.171 |
| Mean | Stdev |
16_H41-21_O6-16 | 1.962 | 0.173 |
| Mean | Stdev |
16_N3-21_H1-16 | 1.963 | 0.096 |
| Mean | Stdev |
16_O2-21_H21-16 | 1.892 | 0.122 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.975 | 0.096 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.903 | 0.127 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.961 | 0.162 |
| Mean | Stdev |
18_H41-19_O6-18 | 2.251 | 1.383 |
| Mean | Stdev |
18_N3-19_H1-18 | 2.230 | 1.236 |
| Mean | Stdev |
18_O2-19_H21-18 | 2.193 | 1.469 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.973 | 0.165 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.972 | 0.096 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.905 | 0.127 |
| Mean | Stdev |
3_H3-34_N1-3 | 1.959 | 0.117 |
| Mean | Stdev |
3_O4-34_H61-3 | 2.038 | 0.229 |
| Mean | Stdev |
4_H41-33_O6-4 | 1.985 | 0.169 |
| Mean | Stdev |
4_N3-33_H1-4 | 1.971 | 0.098 |
| Mean | Stdev |
4_O2-33_H21-4 | 1.923 | 0.143 |
| Mean | Stdev |
5_H3-32_N1-5 | 1.969 | 0.154 |
| Mean | Stdev |
5_O4-32_H61-5 | 2.025 | 0.289 |
| Mean | Stdev |
6_H1-31_N3-6 | 1.980 | 0.105 |
| Mean | Stdev |
6_H21-31_O2-6 | 1.892 | 0.121 |
| Mean | Stdev |
6_O6-31_H41-6 | 1.994 | 0.186 |
| Mean | Stdev |
7_H3-30_N1-7 | 1.995 | 0.132 |
| Mean | Stdev |
7_O4-30_H61-7 | 1.990 | 0.195 |
| Mean | Stdev |
8_H41-29_O6-8 | 1.970 | 0.159 |
| Mean | Stdev |
8_N3-29_H1-8 | 1.965 | 0.092 |
| Mean | Stdev |
8_O2-29_H21-8 | 1.917 | 0.136 |
| Mean | Stdev |
9_H3-28_N1-9 | 1.964 | 0.123 |
| Mean | Stdev |
9_O4-28_H61-9 | 2.027 | 0.215 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 2.0174 | 0.3139 |
1 | H1-N3_1-36 | 2.0040 | 0.1908 |
1 | H21-O2_1-36 | 1.9133 | 0.1869 |
2 | H41-O6_2-35 | 1.9734 | 0.1651 |
2 | N3-H1_2-35 | 1.9719 | 0.0957 |
2 | O2-H21_2-35 | 1.9045 | 0.1274 |
3 | H3-N1_3-34 | 1.9586 | 0.1172 |
3 | O4-H61_3-34 | 2.0385 | 0.2291 |
4 | H41-O6_4-33 | 1.9851 | 0.1693 |
4 | N3-H1_4-33 | 1.9708 | 0.0982 |
4 | O2-H21_4-33 | 1.9229 | 0.1434 |
5 | H3-N1_5-32 | 1.9693 | 0.1540 |
5 | O4-H61_5-32 | 2.0254 | 0.2889 |
6 | O6-H41_6-31 | 1.9945 | 0.1861 |
6 | H1-N3_6-31 | 1.9795 | 0.1049 |
6 | H21-O2_6-31 | 1.8922 | 0.1215 |
7 | H3-N1_7-30 | 1.9952 | 0.1321 |
7 | O4-H61_7-30 | 1.9900 | 0.1950 |
8 | H41-O6_8-29 | 1.9703 | 0.1587 |
8 | N3-H1_8-29 | 1.9654 | 0.0917 |
8 | O2-H21_8-29 | 1.9169 | 0.1357 |
9 | H3-N1_9-28 | 1.9635 | 0.1228 |
9 | O4-H61_9-28 | 2.0274 | 0.2153 |
10 | O6-H41_10-27 | 2.0003 | 0.1854 |
10 | H1-N3_10-27 | 1.9781 | 0.1038 |
10 | H21-O2_10-27 | 1.8867 | 0.1186 |
11 | H3-N1_11-26 | 1.9918 | 0.1300 |
11 | O4-H61_11-26 | 1.9925 | 0.1950 |
12 | H41-O6_12-25 | 1.9718 | 0.1614 |
12 | N3-H1_12-25 | 1.9645 | 0.0939 |
12 | O2-H21_12-25 | 1.9214 | 0.1401 |
13 | H3-N1_13-24 | 1.9733 | 0.2118 |
13 | O4-H61_13-24 | 2.0310 | 0.3005 |
14 | O6-H41_14-23 | 1.9910 | 0.1737 |
14 | H1-N3_14-23 | 1.9817 | 0.1002 |
14 | H21-O2_14-23 | 1.8931 | 0.1220 |
15 | H3-N1_15-22 | 2.0047 | 0.1330 |
15 | O4-H61_15-22 | 1.9652 | 0.1713 |
16 | H41-O6_16-21 | 1.9622 | 0.1733 |
16 | N3-H1_16-21 | 1.9626 | 0.0961 |
16 | O2-H21_16-21 | 1.8923 | 0.1222 |
17 | O6-H41_17-20 | 1.9607 | 0.1618 |
17 | H1-N3_17-20 | 1.9751 | 0.0958 |
17 | H21-O2_17-20 | 1.9025 | 0.1273 |
18 | H41-O6_18-19 | 2.2506 | 1.3828 |
18 | N3-H1_18-19 | 2.2297 | 1.2363 |
18 | O2-H21_18-19 | 2.1929 | 1.4686 |