Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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18 |
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5' |
C |
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U |
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G |
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G |
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G |
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G |
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C |
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U |
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U |
3' |
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3' |
G |
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A |
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U |
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C |
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C |
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5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-36_O6-1 | 2.054 | 0.377 |
| Mean | Stdev |
1_N3-36_H1-1 | 2.000 | 0.233 |
| Mean | Stdev |
1_O2-36_H21-1 | 1.941 | 0.293 |
| Mean | Stdev |
10_H3-27_N1-10 | 1.984 | 0.132 |
| Mean | Stdev |
10_O4-27_H61-10 | 2.067 | 0.263 |
| Mean | Stdev |
11_H1-26_N3-11 | 1.967 | 0.098 |
| Mean | Stdev |
11_H21-26_O2-11 | 1.897 | 0.126 |
| Mean | Stdev |
11_O6-26_H41-11 | 1.976 | 0.174 |
| Mean | Stdev |
12_H61-25_O4-12 | 2.130 | 0.323 |
| Mean | Stdev |
12_N1-25_H3-12 | 1.988 | 0.146 |
| Mean | Stdev |
13_H41-24_O6-13 | 1.992 | 0.189 |
| Mean | Stdev |
13_N3-24_H1-13 | 1.961 | 0.097 |
| Mean | Stdev |
13_O2-24_H21-13 | 1.885 | 0.121 |
| Mean | Stdev |
14_H3-23_N1-14 | 1.976 | 0.121 |
| Mean | Stdev |
14_O4-23_H61-14 | 2.096 | 0.289 |
| Mean | Stdev |
15_H41-22_O6-15 | 1.986 | 0.178 |
| Mean | Stdev |
15_N3-22_H1-15 | 1.967 | 0.099 |
| Mean | Stdev |
15_O2-22_H21-15 | 1.898 | 0.127 |
| Mean | Stdev |
16_H61-21_O4-16 | 2.070 | 0.289 |
| Mean | Stdev |
16_N1-21_H3-16 | 1.988 | 0.150 |
| Mean | Stdev |
17_H3-20_N1-17 | 1.999 | 0.155 |
| Mean | Stdev |
17_O4-20_H61-17 | 2.072 | 0.262 |
| Mean | Stdev |
18_H3-19_N1-18 | 2.210 | 0.805 |
| Mean | Stdev |
18_O4-19_H61-18 | 2.168 | 0.830 |
| Mean | Stdev |
2_H3-35_N1-2 | 1.964 | 0.117 |
| Mean | Stdev |
2_O4-35_H61-2 | 2.095 | 0.270 |
| Mean | Stdev |
3_H61-34_O4-3 | 2.049 | 0.235 |
| Mean | Stdev |
3_N1-34_H3-3 | 1.971 | 0.119 |
| Mean | Stdev |
4_H1-33_N3-4 | 1.960 | 0.096 |
| Mean | Stdev |
4_H21-33_O2-4 | 1.880 | 0.114 |
| Mean | Stdev |
4_O6-33_H41-4 | 1.968 | 0.182 |
| Mean | Stdev |
5_H1-32_N3-5 | 1.962 | 0.092 |
| Mean | Stdev |
5_H21-32_O2-5 | 1.885 | 0.119 |
| Mean | Stdev |
5_O6-32_H41-5 | 1.981 | 0.169 |
| Mean | Stdev |
6_H3-31_N1-6 | 2.146 | 0.711 |
| Mean | Stdev |
6_O4-31_H61-6 | 2.269 | 0.759 |
| Mean | Stdev |
7_H1-30_N3-7 | 1.961 | 0.092 |
| Mean | Stdev |
7_H21-30_O2-7 | 1.886 | 0.117 |
| Mean | Stdev |
7_O6-30_H41-7 | 1.960 | 0.157 |
| Mean | Stdev |
8_H1-29_N3-8 | 1.970 | 0.099 |
| Mean | Stdev |
8_H21-29_O2-8 | 1.900 | 0.126 |
| Mean | Stdev |
8_O6-29_H41-8 | 1.978 | 0.176 |
| Mean | Stdev |
9_H61-28_O4-9 | 2.109 | 0.280 |
| Mean | Stdev |
9_N1-28_H3-9 | 1.986 | 0.133 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-36 | 2.0536 | 0.3768 |
1 | N3-H1_1-36 | 2.0001 | 0.2334 |
1 | O2-H21_1-36 | 1.9406 | 0.2926 |
2 | H3-N1_2-35 | 1.9638 | 0.1170 |
2 | O4-H61_2-35 | 2.0955 | 0.2701 |
3 | N1-H3_3-34 | 1.9709 | 0.1189 |
3 | H61-O4_3-34 | 2.0490 | 0.2353 |
4 | O6-H41_4-33 | 1.9685 | 0.1820 |
4 | H1-N3_4-33 | 1.9598 | 0.0961 |
4 | H21-O2_4-33 | 1.8800 | 0.1135 |
5 | O6-H41_5-32 | 1.9814 | 0.1690 |
5 | H1-N3_5-32 | 1.9615 | 0.0922 |
5 | H21-O2_5-32 | 1.8846 | 0.1192 |
6 | H3-N1_6-31 | 2.1458 | 0.7110 |
6 | O4-H61_6-31 | 2.2689 | 0.7587 |
7 | O6-H41_7-30 | 1.9605 | 0.1571 |
7 | H1-N3_7-30 | 1.9610 | 0.0916 |
7 | H21-O2_7-30 | 1.8864 | 0.1171 |
8 | O6-H41_8-29 | 1.9782 | 0.1761 |
8 | H1-N3_8-29 | 1.9701 | 0.0989 |
8 | H21-O2_8-29 | 1.9002 | 0.1258 |
9 | N1-H3_9-28 | 1.9860 | 0.1327 |
9 | H61-O4_9-28 | 2.1087 | 0.2798 |
10 | H3-N1_10-27 | 1.9843 | 0.1316 |
10 | O4-H61_10-27 | 2.0666 | 0.2630 |
11 | O6-H41_11-26 | 1.9764 | 0.1736 |
11 | H1-N3_11-26 | 1.9674 | 0.0979 |
11 | H21-O2_11-26 | 1.8965 | 0.1258 |
12 | N1-H3_12-25 | 1.9880 | 0.1460 |
12 | H61-O4_12-25 | 2.1296 | 0.3234 |
13 | H41-O6_13-24 | 1.9923 | 0.1890 |
13 | N3-H1_13-24 | 1.9607 | 0.0970 |
13 | O2-H21_13-24 | 1.8852 | 0.1209 |
14 | H3-N1_14-23 | 1.9758 | 0.1214 |
14 | O4-H61_14-23 | 2.0963 | 0.2891 |
15 | H41-O6_15-22 | 1.9857 | 0.1781 |
15 | N3-H1_15-22 | 1.9670 | 0.0989 |
15 | O2-H21_15-22 | 1.8982 | 0.1266 |
16 | N1-H3_16-21 | 1.9881 | 0.1497 |
16 | H61-O4_16-21 | 2.0695 | 0.2891 |
17 | H3-N1_17-20 | 1.9989 | 0.1554 |
17 | O4-H61_17-20 | 2.0720 | 0.2616 |
18 | H3-N1_18-19 | 2.2097 | 0.8051 |
18 | O4-H61_18-19 | 2.1682 | 0.8302 |