Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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17 |
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18 |
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5' |
C |
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A |
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C |
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G |
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G |
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A |
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A |
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C |
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C |
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G |
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G |
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U |
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U |
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C |
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C |
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G |
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U |
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C |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
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U |
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G |
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C |
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C |
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U |
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U |
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G |
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G |
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C |
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C |
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A |
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A |
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G |
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G |
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C |
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A |
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G |
5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-36_O6-1 | 2.047 | 0.342 |
| Mean | Stdev |
1_N3-36_H1-1 | 2.000 | 0.244 |
| Mean | Stdev |
1_O2-36_H21-1 | 1.936 | 0.270 |
| Mean | Stdev |
10_H1-27_N3-10 | 1.978 | 0.129 |
| Mean | Stdev |
10_H21-27_O2-10 | 1.882 | 0.122 |
| Mean | Stdev |
10_O6-27_H41-10 | 1.990 | 0.255 |
| Mean | Stdev |
11_H1-26_N3-11 | 1.969 | 0.100 |
| Mean | Stdev |
11_H21-26_O2-11 | 1.881 | 0.118 |
| Mean | Stdev |
11_O6-26_H41-11 | 1.984 | 0.179 |
| Mean | Stdev |
12_H3-25_N1-12 | 1.996 | 0.146 |
| Mean | Stdev |
12_O4-25_H61-12 | 2.045 | 0.267 |
| Mean | Stdev |
13_H3-24_N1-13 | 1.991 | 0.131 |
| Mean | Stdev |
13_O4-24_H61-13 | 2.102 | 0.261 |
| Mean | Stdev |
14_H41-23_O6-14 | 1.982 | 0.161 |
| Mean | Stdev |
14_N3-23_H1-14 | 1.976 | 0.093 |
| Mean | Stdev |
14_O2-23_H21-14 | 1.901 | 0.121 |
| Mean | Stdev |
15_H41-22_O6-15 | 1.966 | 0.189 |
| Mean | Stdev |
15_N3-22_H1-15 | 1.966 | 0.101 |
| Mean | Stdev |
15_O2-22_H21-15 | 1.890 | 0.122 |
| Mean | Stdev |
16_H1-21_N3-16 | 1.979 | 0.160 |
| Mean | Stdev |
16_H21-21_O2-16 | 1.875 | 0.122 |
| Mean | Stdev |
16_O6-21_H41-16 | 2.025 | 0.324 |
| Mean | Stdev |
17_H3-20_N1-17 | 1.987 | 0.139 |
| Mean | Stdev |
17_O4-20_H61-17 | 2.102 | 0.287 |
| Mean | Stdev |
18_H41-19_O6-18 | 2.008 | 0.299 |
| Mean | Stdev |
18_N3-19_H1-18 | 2.015 | 0.227 |
| Mean | Stdev |
18_O2-19_H21-18 | 1.951 | 0.323 |
| Mean | Stdev |
2_H61-35_O4-2 | 2.083 | 0.286 |
| Mean | Stdev |
2_N1-35_H3-2 | 1.976 | 0.128 |
| Mean | Stdev |
3_H41-34_O6-3 | 2.008 | 0.244 |
| Mean | Stdev |
3_N3-34_H1-3 | 1.970 | 0.120 |
| Mean | Stdev |
3_O2-34_H21-3 | 1.887 | 0.123 |
| Mean | Stdev |
4_H1-33_N3-4 | 1.965 | 0.103 |
| Mean | Stdev |
4_H21-33_O2-4 | 1.883 | 0.122 |
| Mean | Stdev |
4_O6-33_H41-4 | 1.975 | 0.202 |
| Mean | Stdev |
5_H1-32_N3-5 | 1.976 | 0.099 |
| Mean | Stdev |
5_H21-32_O2-5 | 1.903 | 0.123 |
| Mean | Stdev |
5_O6-32_H41-5 | 1.987 | 0.177 |
| Mean | Stdev |
6_H61-31_O4-6 | 2.095 | 0.251 |
| Mean | Stdev |
6_N1-31_H3-6 | 1.985 | 0.124 |
| Mean | Stdev |
7_H61-30_O4-7 | 2.054 | 0.308 |
| Mean | Stdev |
7_N1-30_H3-7 | 2.005 | 0.202 |
| Mean | Stdev |
8_H41-29_O6-8 | 1.977 | 0.163 |
| Mean | Stdev |
8_N3-29_H1-8 | 1.965 | 0.093 |
| Mean | Stdev |
8_O2-29_H21-8 | 1.880 | 0.116 |
| Mean | Stdev |
9_H41-28_O6-9 | 1.985 | 0.231 |
| Mean | Stdev |
9_N3-28_H1-9 | 1.976 | 0.117 |
| Mean | Stdev |
9_O2-28_H21-9 | 1.880 | 0.119 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-36 | 2.0468 | 0.3424 |
1 | N3-H1_1-36 | 2.0003 | 0.2439 |
1 | O2-H21_1-36 | 1.9358 | 0.2699 |
2 | N1-H3_2-35 | 1.9755 | 0.1279 |
2 | H61-O4_2-35 | 2.0831 | 0.2861 |
3 | H41-O6_3-34 | 2.0077 | 0.2438 |
3 | N3-H1_3-34 | 1.9697 | 0.1202 |
3 | O2-H21_3-34 | 1.8873 | 0.1226 |
4 | O6-H41_4-33 | 1.9753 | 0.2022 |
4 | H1-N3_4-33 | 1.9647 | 0.1032 |
4 | H21-O2_4-33 | 1.8827 | 0.1222 |
5 | O6-H41_5-32 | 1.9870 | 0.1774 |
5 | H1-N3_5-32 | 1.9765 | 0.0990 |
5 | H21-O2_5-32 | 1.9026 | 0.1235 |
6 | N1-H3_6-31 | 1.9851 | 0.1241 |
6 | H61-O4_6-31 | 2.0945 | 0.2512 |
7 | N1-H3_7-30 | 2.0049 | 0.2018 |
7 | H61-O4_7-30 | 2.0540 | 0.3080 |
8 | H41-O6_8-29 | 1.9773 | 0.1626 |
8 | N3-H1_8-29 | 1.9649 | 0.0930 |
8 | O2-H21_8-29 | 1.8797 | 0.1162 |
9 | H41-O6_9-28 | 1.9850 | 0.2313 |
9 | N3-H1_9-28 | 1.9761 | 0.1171 |
9 | O2-H21_9-28 | 1.8801 | 0.1192 |
10 | O6-H41_10-27 | 1.9903 | 0.2549 |
10 | H1-N3_10-27 | 1.9783 | 0.1287 |
10 | H21-O2_10-27 | 1.8822 | 0.1225 |
11 | O6-H41_11-26 | 1.9839 | 0.1795 |
11 | H1-N3_11-26 | 1.9686 | 0.0998 |
11 | H21-O2_11-26 | 1.8810 | 0.1178 |
12 | H3-N1_12-25 | 1.9955 | 0.1461 |
12 | O4-H61_12-25 | 2.0451 | 0.2666 |
13 | H3-N1_13-24 | 1.9911 | 0.1311 |
13 | O4-H61_13-24 | 2.1019 | 0.2613 |
14 | H41-O6_14-23 | 1.9822 | 0.1605 |
14 | N3-H1_14-23 | 1.9757 | 0.0928 |
14 | O2-H21_14-23 | 1.9013 | 0.1211 |
15 | H41-O6_15-22 | 1.9661 | 0.1892 |
15 | N3-H1_15-22 | 1.9661 | 0.1012 |
15 | O2-H21_15-22 | 1.8902 | 0.1219 |
16 | O6-H41_16-21 | 2.0251 | 0.3236 |
16 | H1-N3_16-21 | 1.9793 | 0.1601 |
16 | H21-O2_16-21 | 1.8746 | 0.1216 |
17 | H3-N1_17-20 | 1.9867 | 0.1386 |
17 | O4-H61_17-20 | 2.1021 | 0.2872 |
18 | H41-O6_18-19 | 2.0083 | 0.2995 |
18 | N3-H1_18-19 | 2.0148 | 0.2268 |
18 | O2-H21_18-19 | 1.9509 | 0.3230 |