Nucleic Acid Analysis - Stiffness Analysis
(Using Curves+ program)
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | |||||||||||||
5' | C | - | G | - | A | - | T | - | A | - | T | - | A | - | T | - | A | - | T | - | A | - | T | 3' |
| | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | ||||||
3' | T | - | A | - | T | - | A | - | T | - | A | - | T | - | A | - | T | - | A | - | G | - | C | 5' |
24 | 23 | 22 | 21 | 20 | 19 | 18 | 17 | 16 | 15 | 14 | 13 |
Interactive Sequence (see Help)
Open in New Window Download Raw Data |
Open in New Window Download Raw Data |
Open in New Window Download Raw Data |
Open in New Window Download Raw Data |
Open in New Window Download Raw Data |
Open in New Window Download Raw Data |
Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 0.102 | 0.000 | 0.000 | 0.016 | 0.000 | 0.000 |
Slide | 0.000 | 1.199 | -0.009 | 0.000 | -0.015 | 0.013 |
Rise | 0.000 | -0.010 | 0.577 | 0.000 | -0.021 | -0.007 |
Tilt | 0.016 | 0.000 | 0.000 | 0.003 | 0.000 | 0.000 |
Roll | 0.000 | -0.015 | -0.021 | 0.000 | 0.001 | 0.000 |
Twist | 0.000 | 0.013 | -0.007 | 0.000 | 0.000 | 0.002 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
Download Raw Data |
Open in New Window |
Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 0.321 | 0.000 | 0.000 | 0.018 | 0.000 | 0.000 |
Slide | 0.000 | 1.274 | -0.056 | 0.000 | -0.013 | 0.005 |
Rise | 0.000 | -0.056 | 0.706 | 0.000 | -0.004 | 0.017 |
Tilt | 0.018 | 0.000 | 0.000 | 0.002 | 0.000 | 0.000 |
Roll | 0.000 | -0.013 | -0.004 | 0.000 | 0.000 | -0.000 |
Twist | 0.000 | 0.005 | 0.017 | 0.000 | -0.000 | 0.001 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
Download Raw Data |
Open in New Window |
Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 1.298 | 0.000 | 0.000 | 0.050 | 0.000 | 0.000 |
Slide | 0.000 | 1.477 | 0.140 | 0.000 | -0.016 | 0.012 |
Rise | 0.000 | 0.140 | 1.315 | 0.000 | -0.010 | 0.024 |
Tilt | 0.050 | 0.000 | 0.000 | 0.002 | 0.000 | 0.000 |
Roll | 0.000 | -0.016 | -0.010 | 0.000 | 0.000 | -0.000 |
Twist | 0.000 | 0.012 | 0.024 | 0.000 | -0.000 | 0.001 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
Download Raw Data |
Open in New Window |
Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 0.099 | 0.000 | 0.000 | 0.006 | 0.000 | 0.000 |
Slide | 0.000 | 0.684 | -0.190 | 0.000 | -0.006 | -0.007 |
Rise | 0.000 | -0.190 | 0.369 | 0.000 | 0.001 | 0.003 |
Tilt | 0.006 | 0.000 | 0.000 | 0.001 | 0.000 | 0.000 |
Roll | 0.000 | -0.006 | 0.001 | 0.000 | 0.000 | 0.000 |
Twist | 0.000 | -0.007 | 0.003 | 0.000 | 0.000 | 0.001 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
Download Raw Data |
Open in New Window |
Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 0.474 | 0.000 | 0.000 | -0.016 | 0.000 | 0.000 |
Slide | 0.000 | 0.733 | 0.057 | 0.000 | 0.008 | 0.013 |
Rise | 0.000 | 0.057 | 0.926 | 0.000 | -0.013 | -0.011 |
Tilt | -0.016 | 0.000 | 0.000 | 0.001 | 0.000 | 0.000 |
Roll | 0.000 | 0.008 | -0.013 | 0.000 | 0.000 | 0.000 |
Twist | 0.000 | 0.013 | -0.011 | 0.000 | 0.000 | 0.001 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
Download Raw Data |
Open in New Window |
Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 0.176 | 0.000 | 0.000 | -0.004 | 0.000 | 0.000 |
Slide | 0.000 | 0.312 | -0.023 | 0.000 | 0.003 | 0.004 |
Rise | 0.000 | -0.023 | 0.265 | 0.000 | -0.000 | -0.009 |
Tilt | -0.004 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
Roll | 0.000 | 0.003 | -0.000 | 0.000 | 0.000 | 0.000 |
Twist | 0.000 | 0.004 | -0.009 | 0.000 | 0.000 | 0.001 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
Download Raw Data |
Open in New Window |
Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 1.133 | 0.000 | 0.000 | -0.030 | 0.000 | 0.000 |
Slide | 0.000 | 3.222 | 1.075 | 0.000 | 0.025 | 0.074 |
Rise | 0.000 | 1.090 | 1.850 | 0.000 | -0.048 | 0.023 |
Tilt | -0.030 | 0.000 | 0.000 | 0.001 | 0.000 | 0.000 |
Roll | 0.000 | 0.023 | -0.050 | 0.000 | 0.005 | -0.001 |
Twist | 0.000 | 0.075 | 0.024 | 0.000 | -0.001 | 0.003 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
Download Raw Data |
Open in New Window |
Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 0.413 | 0.000 | 0.000 | -0.008 | 0.000 | 0.000 |
Slide | 0.000 | 2.295 | 0.278 | 0.000 | 0.016 | 0.051 |
Rise | 0.000 | 0.280 | 0.870 | 0.000 | -0.021 | 0.009 |
Tilt | -0.008 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
Roll | 0.000 | 0.016 | -0.021 | 0.000 | 0.002 | -0.001 |
Twist | 0.000 | 0.051 | 0.009 | 0.000 | -0.001 | 0.002 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
Download Raw Data |
Open in New Window |
Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 0.057 | 0.000 | 0.000 | -0.001 | 0.000 | 0.000 |
Slide | 0.000 | 0.132 | 0.072 | 0.000 | -0.003 | 0.005 |
Rise | 0.000 | 0.072 | 0.180 | 0.000 | -0.005 | 0.003 |
Tilt | -0.001 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
Roll | 0.000 | -0.003 | -0.005 | 0.000 | 0.001 | -0.000 |
Twist | 0.000 | 0.005 | 0.003 | 0.000 | -0.000 | 0.000 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
Download Raw Data |
Open in New Window |
Mean | Stdev | |
-atat.3.cte | 0.000 | 0.000 |
Mean | Stdev | |
-atat.5.cte | 0.000 | 0.000 |
Mean | Stdev | |
-atat.7.cte | 0.000 | 0.000 |
Mean | Stdev | |
-atat.9.cte | 0.000 | 0.000 |
Mean | Stdev | |
-gata.2.cte | 0.000 | 0.000 |
Mean | Stdev | |
-taga.10.cte | 0.000 | 0.000 |
Mean | Stdev | |
-tata.4.cte | 0.000 | 0.000 |
Mean | Stdev | |
-tata.6.cte | 0.000 | 0.000 |
Mean | Stdev | |
-tata.8.cte | 0.000 | 0.000 |
Mean | Stdev | |
rise-10-TAGA | 1.037 | 2.361 |
Mean | Stdev | |
roll-10-TAGA | -10.011 | 67.761 |
Mean | Stdev | |
shift-10-TAGA | 0.000 | 2.387 |
Mean | Stdev | |
slide-10-TAGA | 0.835 | 1.647 |
Mean | Stdev | |
tilt-10-TAGA | 3.750 | 62.525 |
Mean | Stdev | |
twist-10-TAGA | 9.604 | 54.207 |
Mean | Stdev | |
rise-2-GATA | 1.784 | 1.213 |
Mean | Stdev | |
roll-2-GATA | -31.166 | 59.429 |
Mean | Stdev | |
shift-2-GATA | 0.000 | 2.773 |
Mean | Stdev | |
slide-2-GATA | 0.012 | 1.212 |
Mean | Stdev | |
tilt-2-GATA | 1.280 | 74.485 |
Mean | Stdev | |
twist-2-GATA | 60.203 | 21.730 |
Mean | Stdev | |
rise-3-ATAT | -0.719 | 2.059 |
Mean | Stdev | |
roll-3-ATAT | -64.124 | 53.404 |
Mean | Stdev | |
shift-3-ATAT | 0.000 | 5.124 |
Mean | Stdev | |
slide-3-ATAT | -0.723 | 0.959 |
Mean | Stdev | |
tilt-3-ATAT | 0.006 | 29.806 |
Mean | Stdev | |
twist-3-ATAT | -18.534 | 16.036 |
Mean | Stdev | |
rise-4-TATA | 2.614 | 1.445 |
Mean | Stdev | |
roll-4-TATA | 58.343 | 31.518 |
Mean | Stdev | |
shift-4-TATA | 0.000 | 1.635 |
Mean | Stdev | |
slide-4-TATA | -2.014 | 1.885 |
Mean | Stdev | |
tilt-4-TATA | 11.171 | 38.674 |
Mean | Stdev | |
twist-4-TATA | 104.373 | 49.650 |
Mean | Stdev | |
rise-5-ATAT | 0.619 | 1.617 |
Mean | Stdev | |
roll-5-ATAT | -11.472 | 75.277 |
Mean | Stdev | |
shift-5-ATAT | 0.000 | 2.066 |
Mean | Stdev | |
slide-5-ATAT | -1.754 | 1.032 |
Mean | Stdev | |
tilt-5-ATAT | 0.000 | 27.372 |
Mean | Stdev | |
twist-5-ATAT | -2.613 | 12.978 |
Mean | Stdev | |
rise-6-TATA | 3.070 | 1.094 |
Mean | Stdev | |
roll-6-TATA | 60.628 | 31.165 |
Mean | Stdev | |
shift-6-TATA | 0.000 | 1.697 |
Mean | Stdev | |
slide-6-TATA | -1.571 | 1.399 |
Mean | Stdev | |
tilt-6-TATA | 3.217 | 57.396 |
Mean | Stdev | |
twist-6-TATA | 84.260 | 47.633 |
Mean | Stdev | |
rise-7-ATAT | -0.079 | 1.195 |
Mean | Stdev | |
roll-7-ATAT | 25.170 | 44.809 |
Mean | Stdev | |
shift-7-ATAT | 0.000 | 2.059 |
Mean | Stdev | |
slide-7-ATAT | -2.043 | 1.165 |
Mean | Stdev | |
tilt-7-ATAT | 0.057 | 50.165 |
Mean | Stdev | |
twist-7-ATAT | 11.848 | 26.145 |
Mean | Stdev | |
rise-8-TATA | 2.467 | 2.264 |
Mean | Stdev | |
roll-8-TATA | 31.898 | 52.026 |
Mean | Stdev | |
shift-8-TATA | 0.000 | 3.792 |
Mean | Stdev | |
slide-8-TATA | 0.590 | 3.874 |
Mean | Stdev | |
tilt-8-TATA | 26.721 | 62.942 |
Mean | Stdev | |
twist-8-TATA | 44.100 | 64.580 |
Mean | Stdev | |
rise-9-ATAT | 1.738 | 1.406 |
Mean | Stdev | |
roll-9-ATAT | -20.050 | 79.518 |
Mean | Stdev | |
shift-9-ATAT | 0.000 | 2.960 |
Mean | Stdev | |
slide-9-ATAT | -0.689 | 1.243 |
Mean | Stdev | |
tilt-9-ATAT | 0.030 | 27.864 |
Mean | Stdev | |
twist-9-ATAT | 22.644 | 29.048 |