NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.429	0.000	0.000	-0.045	0.000	0.000
Slide	0.000	3.306	1.289	0.000	-0.061	-0.196
Rise	0.000	1.289	7.595	0.000	-0.041	-0.140
Tilt	-0.045	0.000	0.000	0.028	0.000	0.000
Roll	0.000	-0.061	-0.041	0.000	0.024	0.004
Twist	0.000	-0.196	-0.140	0.000	0.004	0.034

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.949	0.000	0.000	0.010	0.000	0.000
Slide	0.000	5.031	2.931	0.000	-0.013	-0.179
Rise	0.000	2.931	10.425	0.000	0.066	-0.148
Tilt	0.010	0.000	0.000	0.046	0.000	0.000
Roll	0.000	-0.013	0.066	0.000	0.034	0.007
Twist	0.000	-0.179	-0.148	0.000	0.007	0.066

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.911	0.000	0.000	-0.118	0.000	0.000
Slide	0.000	2.866	0.782	0.000	0.010	-0.127
Rise	0.000	0.782	8.215	0.000	-0.094	-0.262
Tilt	-0.118	0.000	0.000	0.029	0.000	0.000
Roll	0.000	0.010	-0.094	0.000	0.017	0.007
Twist	0.000	-0.127	-0.262	0.000	0.007	0.025

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.950	0.000	0.000	-0.099	0.000	0.000
Slide	0.000	2.451	0.713	0.000	0.003	-0.121
Rise	0.000	0.713	7.411	0.000	-0.078	-0.228
Tilt	-0.099	0.000	0.000	0.024	0.000	0.000
Roll	0.000	0.003	-0.078	0.000	0.016	0.007
Twist	0.000	-0.121	-0.228	0.000	0.007	0.024

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.842	0.000	0.000	-0.084	0.000	0.000
Slide	0.000	2.061	1.391	0.000	-0.037	-0.114
Rise	0.000	1.391	7.292	0.000	-0.057	-0.179
Tilt	-0.084	0.000	0.000	0.032	0.000	0.000
Roll	0.000	-0.037	-0.057	0.000	0.023	0.012
Twist	0.000	-0.114	-0.179	0.000	0.012	0.030

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.116	0.000	0.000	-0.091	0.000	0.000
Slide	0.000	3.437	2.189	0.000	0.066	-0.052
Rise	0.000	2.189	10.266	0.000	0.115	-0.194
Tilt	-0.091	0.000	0.000	0.034	0.000	0.000
Roll	0.000	0.066	0.115	0.000	0.022	0.004
Twist	0.000	-0.052	-0.194	0.000	0.004	0.019

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.088	0.000	0.000	-0.119	0.000	0.000
Slide	0.000	3.152	2.666	0.000	0.062	-0.082
Rise	0.000	2.666	11.189	0.000	0.121	-0.234
Tilt	-0.119	0.000	0.000	0.043	0.000	0.000
Roll	0.000	0.062	0.121	0.000	0.025	0.006
Twist	0.000	-0.082	-0.234	0.000	0.006	0.038

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.769	0.000	0.000	-0.080	0.000	0.000
Slide	0.000	2.146	1.342	0.000	-0.045	-0.124
Rise	0.000	1.342	7.417	0.000	-0.049	-0.156
Tilt	-0.080	0.000	0.000	0.034	0.000	0.000
Roll	0.000	-0.045	-0.049	0.000	0.023	0.012
Twist	0.000	-0.124	-0.156	0.000	0.012	0.031

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.464	0.000	0.000	-0.050	0.000	0.000
Slide	0.000	3.208	1.490	0.000	-0.061	-0.221
Rise	0.000	1.490	7.472	0.000	-0.065	-0.152
Tilt	-0.050	0.000	0.000	0.028	0.000	0.000
Roll	0.000	-0.061	-0.065	0.000	0.024	0.006
Twist	0.000	-0.221	-0.152	0.000	0.006	0.046

[Image courtesy of Curves+]

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	Mean	Stdev
-aatt.5.cte	0.000	0.000

	Mean	Stdev
-atat.6.cte	0.000	0.000

	Mean	Stdev
-cgcg.3.cte	0.000	0.000

	Mean	Stdev
-cgcg.9.cte	0.000	0.000

	Mean	Stdev
-gatc.4.cte	0.000	0.000

	Mean	Stdev
-gcgc.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
-tcga.8.cte	0.000	0.000

	Mean	Stdev
-ttaa.7.cte	0.000	0.000

	Mean	Stdev
rise-10-GCGC	3.348	0.294

	Mean	Stdev
roll-10-GCGC	-1.895	5.679

	Mean	Stdev
shift-10-GCGC	0.000	0.820

	Mean	Stdev
slide-10-GCGC	-0.180	0.453

	Mean	Stdev
tilt-10-GCGC	0.000	4.689

	Mean	Stdev
twist-10-GCGC	31.186	6.629

	Mean	Stdev
rise-2-GCGC	3.376	0.276

	Mean	Stdev
roll-2-GCGC	-1.612	5.259

	Mean	Stdev
shift-2-GCGC	0.000	0.879

	Mean	Stdev
slide-2-GCGC	-0.249	0.492

	Mean	Stdev
tilt-2-GCGC	0.000	4.429

	Mean	Stdev
twist-2-GCGC	34.002	4.474

	Mean	Stdev
rise-3-CGCG	3.145	0.332

	Mean	Stdev
roll-3-CGCG	5.702	6.529

	Mean	Stdev
shift-3-CGCG	0.000	1.174

	Mean	Stdev
slide-3-CGCG	0.173	0.538

	Mean	Stdev
tilt-3-CGCG	0.000	6.596

	Mean	Stdev
twist-3-CGCG	33.148	7.197

	Mean	Stdev
rise-4-GATC	3.391	0.315

	Mean	Stdev
roll-4-GATC	2.800	5.696

	Mean	Stdev
shift-4-GATC	0.000	0.969

	Mean	Stdev
slide-4-GATC	-0.044	0.617

	Mean	Stdev
tilt-4-GATC	0.000	4.960

	Mean	Stdev
twist-4-GATC	35.284	5.715

	Mean	Stdev
rise-5-AATT	3.358	0.291

	Mean	Stdev
roll-5-AATT	1.297	5.076

	Mean	Stdev
shift-5-AATT	0.000	0.657

	Mean	Stdev
slide-5-AATT	-0.578	0.528

	Mean	Stdev
tilt-5-AATT	0.000	4.667

	Mean	Stdev
twist-5-AATT	35.330	5.160

	Mean	Stdev
rise-6-ATAT	3.374	0.263

	Mean	Stdev
roll-6-ATAT	-1.716	4.265

	Mean	Stdev
shift-6-ATAT	0.000	0.549

	Mean	Stdev
slide-6-ATAT	-0.981	0.387

	Mean	Stdev
tilt-6-ATAT	0.000	3.582

	Mean	Stdev
twist-6-ATAT	32.875	3.164

	Mean	Stdev
rise-7-TTAA	3.398	0.297

	Mean	Stdev
roll-7-TTAA	1.275	5.063

	Mean	Stdev
shift-7-TTAA	0.000	0.653

	Mean	Stdev
slide-7-TTAA	-0.560	0.537

	Mean	Stdev
tilt-7-TTAA	0.000	4.759

	Mean	Stdev
twist-7-TTAA	36.092	4.392

	Mean	Stdev
rise-8-TCGA	3.407	0.305

	Mean	Stdev
roll-8-TCGA	2.673	5.649

	Mean	Stdev
shift-8-TCGA	0.000	1.007

	Mean	Stdev
slide-8-TCGA	0.065	0.610

	Mean	Stdev
tilt-8-TCGA	0.000	4.803

	Mean	Stdev
twist-8-TCGA	36.379	5.481

	Mean	Stdev
rise-9-CGCG	3.076	0.339

	Mean	Stdev
roll-9-CGCG	6.280	6.609

	Mean	Stdev
shift-9-CGCG	0.000	1.034

	Mean	Stdev
slide-9-CGCG	0.031	0.589

	Mean	Stdev
tilt-9-CGCG	0.000	6.436

	Mean	Stdev
twist-9-CGCG	31.444	7.377

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