NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.389	0.000	0.000	-0.063	0.000	0.000
Slide	0.000	2.968	1.275	0.000	-0.055	-0.199
Rise	0.000	1.275	7.595	0.000	-0.043	-0.151
Tilt	-0.063	0.000	0.000	0.030	0.000	0.000
Roll	0.000	-0.055	-0.043	0.000	0.024	0.005
Twist	0.000	-0.199	-0.151	0.000	0.005	0.041

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	2.202	0.000	0.000	-0.001	0.000	0.000
Slide	0.000	4.951	2.481	0.000	-0.016	-0.171
Rise	0.000	2.481	9.935	0.000	0.071	-0.123
Tilt	-0.001	0.000	0.000	0.047	0.000	0.000
Roll	0.000	-0.016	0.071	0.000	0.035	0.007
Twist	0.000	-0.171	-0.123	0.000	0.007	0.066

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.921	0.000	0.000	-0.107	0.000	0.000
Slide	0.000	2.754	0.457	0.000	0.003	-0.122
Rise	0.000	0.458	7.866	0.000	-0.084	-0.229
Tilt	-0.107	0.000	0.000	0.027	0.000	0.000
Roll	0.000	0.003	-0.084	0.000	0.017	0.007
Twist	0.000	-0.122	-0.229	0.000	0.007	0.023

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.936	0.000	0.000	-0.113	0.000	0.000
Slide	0.000	2.839	0.330	0.000	0.005	-0.126
Rise	0.000	0.330	7.924	0.000	-0.079	-0.227
Tilt	-0.113	0.000	0.000	0.028	0.000	0.000
Roll	0.000	0.005	-0.079	0.000	0.016	0.006
Twist	0.000	-0.126	-0.227	0.000	0.006	0.023

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.828	0.000	0.000	-0.079	0.000	0.000
Slide	0.000	2.071	1.500	0.000	-0.038	-0.126
Rise	0.000	1.500	7.694	0.000	-0.047	-0.187
Tilt	-0.079	0.000	0.000	0.032	0.000	0.000
Roll	0.000	-0.038	-0.047	0.000	0.022	0.010
Twist	0.000	-0.126	-0.187	0.000	0.010	0.029

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.110	0.000	0.000	-0.117	0.000	0.000
Slide	0.000	3.057	2.382	0.000	0.066	-0.094
Rise	0.000	2.382	11.131	0.000	0.146	-0.230
Tilt	-0.117	0.000	0.000	0.040	0.000	0.000
Roll	0.000	0.066	0.146	0.000	0.025	0.006
Twist	0.000	-0.094	-0.230	0.000	0.006	0.034

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.071	0.000	0.000	-0.122	0.000	0.000
Slide	0.000	3.209	2.279	0.000	0.074	-0.093
Rise	0.000	2.279	11.050	0.000	0.132	-0.236
Tilt	-0.122	0.000	0.000	0.042	0.000	0.000
Roll	0.000	0.074	0.132	0.000	0.024	0.005
Twist	0.000	-0.093	-0.236	0.000	0.005	0.035

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.810	0.000	0.000	-0.078	0.000	0.000
Slide	0.000	2.036	1.432	0.000	-0.043	-0.123
Rise	0.000	1.432	7.611	0.000	-0.053	-0.177
Tilt	-0.078	0.000	0.000	0.032	0.000	0.000
Roll	0.000	-0.043	-0.053	0.000	0.023	0.012
Twist	0.000	-0.123	-0.177	0.000	0.012	0.030

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.376	0.000	0.000	-0.066	0.000	0.000
Slide	0.000	3.153	1.463	0.000	-0.057	-0.209
Rise	0.000	1.463	7.679	0.000	-0.041	-0.175
Tilt	-0.066	0.000	0.000	0.030	0.000	0.000
Roll	0.000	-0.057	-0.041	0.000	0.024	0.006
Twist	0.000	-0.209	-0.175	0.000	0.006	0.040

[Image courtesy of Curves+]

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	Mean	Stdev
-aatt.5.cte	0.000	0.000

	Mean	Stdev
-atat.6.cte	0.000	0.000

	Mean	Stdev
-cgcg.3.cte	0.000	0.000

	Mean	Stdev
-cgcg.9.cte	0.000	0.000

	Mean	Stdev
-gatc.4.cte	0.000	0.000

	Mean	Stdev
-gcgc.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
-tcga.8.cte	0.000	0.000

	Mean	Stdev
-ttaa.7.cte	0.000	0.000

	Mean	Stdev
rise-10-GCGC	3.391	0.277

	Mean	Stdev
roll-10-GCGC	-1.902	5.519

	Mean	Stdev
shift-10-GCGC	0.000	0.874

	Mean	Stdev
slide-10-GCGC	-0.259	0.498

	Mean	Stdev
tilt-10-GCGC	0.000	4.590

	Mean	Stdev
twist-10-GCGC	34.032	4.874

	Mean	Stdev
rise-2-GCGC	3.398	0.273

	Mean	Stdev
roll-2-GCGC	-2.303	5.548

	Mean	Stdev
shift-2-GCGC	0.000	0.903

	Mean	Stdev
slide-2-GCGC	-0.221	0.484

	Mean	Stdev
tilt-2-GCGC	0.000	4.539

	Mean	Stdev
twist-2-GCGC	33.897	4.774

	Mean	Stdev
rise-3-CGCG	3.119	0.330

	Mean	Stdev
roll-3-CGCG	6.124	6.491

	Mean	Stdev
shift-3-CGCG	0.000	1.084

	Mean	Stdev
slide-3-CGCG	0.117	0.553

	Mean	Stdev
tilt-3-CGCG	0.000	6.313

	Mean	Stdev
twist-3-CGCG	32.455	7.352

	Mean	Stdev
rise-4-GATC	3.381	0.308

	Mean	Stdev
roll-4-GATC	2.476	5.632

	Mean	Stdev
shift-4-GATC	0.000	0.966

	Mean	Stdev
slide-4-GATC	-0.032	0.637

	Mean	Stdev
tilt-4-GATC	0.000	4.942

	Mean	Stdev
twist-4-GATC	35.454	5.815

	Mean	Stdev
rise-5-AATT	3.367	0.292

	Mean	Stdev
roll-5-AATT	1.025	5.100

	Mean	Stdev
shift-5-AATT	0.000	0.684

	Mean	Stdev
slide-5-AATT	-0.499	0.552

	Mean	Stdev
tilt-5-AATT	0.000	4.673

	Mean	Stdev
twist-5-AATT	36.016	4.674

	Mean	Stdev
rise-6-ATAT	3.368	0.263

	Mean	Stdev
roll-6-ATAT	-1.876	4.169

	Mean	Stdev
shift-6-ATAT	0.000	0.516

	Mean	Stdev
slide-6-ATAT	-0.972	0.382

	Mean	Stdev
tilt-6-ATAT	0.000	3.544

	Mean	Stdev
twist-6-ATAT	32.955	3.169

	Mean	Stdev
rise-7-TTAA	3.374	0.294

	Mean	Stdev
roll-7-TTAA	1.125	5.059

	Mean	Stdev
shift-7-TTAA	0.000	0.690

	Mean	Stdev
slide-7-TTAA	-0.512	0.542

	Mean	Stdev
tilt-7-TTAA	0.000	4.682

	Mean	Stdev
twist-7-TTAA	36.137	4.807

	Mean	Stdev
rise-8-TCGA	3.381	0.307

	Mean	Stdev
roll-8-TCGA	2.699	5.564

	Mean	Stdev
shift-8-TCGA	0.000	0.972

	Mean	Stdev
slide-8-TCGA	-0.025	0.635

	Mean	Stdev
tilt-8-TCGA	0.000	4.892

	Mean	Stdev
twist-8-TCGA	35.507	5.727

	Mean	Stdev
rise-9-CGCG	3.119	0.332

	Mean	Stdev
roll-9-CGCG	6.130	6.512

	Mean	Stdev
shift-9-CGCG	0.000	1.108

	Mean	Stdev
slide-9-CGCG	0.130	0.553

	Mean	Stdev
tilt-9-CGCG	0.000	6.438

	Mean	Stdev
twist-9-CGCG	32.482	7.409

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