Nucleic Acid Analysis - Stiffness Analysis
(Using Curves+ program)
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | |||||||||||||
5' | C | - | G | - | C | - | G | - | A | - | A | - | T | - | T | - | C | - | G | - | C | - | G | 3' |
| | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | ||||||
3' | G | - | C | - | G | - | C | - | T | - | T | - | A | - | A | - | G | - | C | - | G | - | C | 5' |
24 | 23 | 22 | 21 | 20 | 19 | 18 | 17 | 16 | 15 | 14 | 13 |
Interactive Sequence (see Help)
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Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 1.389 | 0.000 | 0.000 | -0.063 | 0.000 | 0.000 |
Slide | 0.000 | 2.968 | 1.275 | 0.000 | -0.055 | -0.199 |
Rise | 0.000 | 1.275 | 7.595 | 0.000 | -0.043 | -0.151 |
Tilt | -0.063 | 0.000 | 0.000 | 0.030 | 0.000 | 0.000 |
Roll | 0.000 | -0.055 | -0.043 | 0.000 | 0.024 | 0.005 |
Twist | 0.000 | -0.199 | -0.151 | 0.000 | 0.005 | 0.041 |
![]() |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
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Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 2.202 | 0.000 | 0.000 | -0.001 | 0.000 | 0.000 |
Slide | 0.000 | 4.951 | 2.481 | 0.000 | -0.016 | -0.171 |
Rise | 0.000 | 2.481 | 9.935 | 0.000 | 0.071 | -0.123 |
Tilt | -0.001 | 0.000 | 0.000 | 0.047 | 0.000 | 0.000 |
Roll | 0.000 | -0.016 | 0.071 | 0.000 | 0.035 | 0.007 |
Twist | 0.000 | -0.171 | -0.123 | 0.000 | 0.007 | 0.066 |
![]() |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
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Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 0.921 | 0.000 | 0.000 | -0.107 | 0.000 | 0.000 |
Slide | 0.000 | 2.754 | 0.457 | 0.000 | 0.003 | -0.122 |
Rise | 0.000 | 0.458 | 7.866 | 0.000 | -0.084 | -0.229 |
Tilt | -0.107 | 0.000 | 0.000 | 0.027 | 0.000 | 0.000 |
Roll | 0.000 | 0.003 | -0.084 | 0.000 | 0.017 | 0.007 |
Twist | 0.000 | -0.122 | -0.229 | 0.000 | 0.007 | 0.023 |
![]() |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
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Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 0.936 | 0.000 | 0.000 | -0.113 | 0.000 | 0.000 |
Slide | 0.000 | 2.839 | 0.330 | 0.000 | 0.005 | -0.126 |
Rise | 0.000 | 0.330 | 7.924 | 0.000 | -0.079 | -0.227 |
Tilt | -0.113 | 0.000 | 0.000 | 0.028 | 0.000 | 0.000 |
Roll | 0.000 | 0.005 | -0.079 | 0.000 | 0.016 | 0.006 |
Twist | 0.000 | -0.126 | -0.227 | 0.000 | 0.006 | 0.023 |
![]() |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
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Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 0.828 | 0.000 | 0.000 | -0.079 | 0.000 | 0.000 |
Slide | 0.000 | 2.071 | 1.500 | 0.000 | -0.038 | -0.126 |
Rise | 0.000 | 1.500 | 7.694 | 0.000 | -0.047 | -0.187 |
Tilt | -0.079 | 0.000 | 0.000 | 0.032 | 0.000 | 0.000 |
Roll | 0.000 | -0.038 | -0.047 | 0.000 | 0.022 | 0.010 |
Twist | 0.000 | -0.126 | -0.187 | 0.000 | 0.010 | 0.029 |
![]() |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
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Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 1.110 | 0.000 | 0.000 | -0.117 | 0.000 | 0.000 |
Slide | 0.000 | 3.057 | 2.382 | 0.000 | 0.066 | -0.094 |
Rise | 0.000 | 2.382 | 11.131 | 0.000 | 0.146 | -0.230 |
Tilt | -0.117 | 0.000 | 0.000 | 0.040 | 0.000 | 0.000 |
Roll | 0.000 | 0.066 | 0.146 | 0.000 | 0.025 | 0.006 |
Twist | 0.000 | -0.094 | -0.230 | 0.000 | 0.006 | 0.034 |
![]() |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
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Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 1.071 | 0.000 | 0.000 | -0.122 | 0.000 | 0.000 |
Slide | 0.000 | 3.209 | 2.279 | 0.000 | 0.074 | -0.093 |
Rise | 0.000 | 2.279 | 11.050 | 0.000 | 0.132 | -0.236 |
Tilt | -0.122 | 0.000 | 0.000 | 0.042 | 0.000 | 0.000 |
Roll | 0.000 | 0.074 | 0.132 | 0.000 | 0.024 | 0.005 |
Twist | 0.000 | -0.093 | -0.236 | 0.000 | 0.005 | 0.035 |
![]() |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
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Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 0.810 | 0.000 | 0.000 | -0.078 | 0.000 | 0.000 |
Slide | 0.000 | 2.036 | 1.432 | 0.000 | -0.043 | -0.123 |
Rise | 0.000 | 1.432 | 7.611 | 0.000 | -0.053 | -0.177 |
Tilt | -0.078 | 0.000 | 0.000 | 0.032 | 0.000 | 0.000 |
Roll | 0.000 | -0.043 | -0.053 | 0.000 | 0.023 | 0.012 |
Twist | 0.000 | -0.123 | -0.177 | 0.000 | 0.012 | 0.030 |
![]() |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
Download Raw Data |
Open in New Window |
Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 1.376 | 0.000 | 0.000 | -0.066 | 0.000 | 0.000 |
Slide | 0.000 | 3.153 | 1.463 | 0.000 | -0.057 | -0.209 |
Rise | 0.000 | 1.463 | 7.679 | 0.000 | -0.041 | -0.175 |
Tilt | -0.066 | 0.000 | 0.000 | 0.030 | 0.000 | 0.000 |
Roll | 0.000 | -0.057 | -0.041 | 0.000 | 0.024 | 0.006 |
Twist | 0.000 | -0.209 | -0.175 | 0.000 | 0.006 | 0.040 |
![]() |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
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Open in New Window |
Mean | Stdev | |
-aatt.5.cte | 0.000 | 0.000 |
Mean | Stdev | |
-atat.6.cte | 0.000 | 0.000 |
Mean | Stdev | |
-cgcg.3.cte | 0.000 | 0.000 |
Mean | Stdev | |
-cgcg.9.cte | 0.000 | 0.000 |
Mean | Stdev | |
-gatc.4.cte | 0.000 | 0.000 |
Mean | Stdev | |
-gcgc.10.cte | 0.000 | 0.000 |
Mean | Stdev | |
-gcgc.2.cte | 0.000 | 0.000 |
Mean | Stdev | |
-tcga.8.cte | 0.000 | 0.000 |
Mean | Stdev | |
-ttaa.7.cte | 0.000 | 0.000 |
Mean | Stdev | |
rise-10-GCGC | 3.391 | 0.277 |
Mean | Stdev | |
roll-10-GCGC | -1.902 | 5.519 |
Mean | Stdev | |
shift-10-GCGC | 0.000 | 0.874 |
Mean | Stdev | |
slide-10-GCGC | -0.259 | 0.498 |
Mean | Stdev | |
tilt-10-GCGC | 0.000 | 4.590 |
Mean | Stdev | |
twist-10-GCGC | 34.032 | 4.874 |
Mean | Stdev | |
rise-2-GCGC | 3.398 | 0.273 |
Mean | Stdev | |
roll-2-GCGC | -2.303 | 5.548 |
Mean | Stdev | |
shift-2-GCGC | 0.000 | 0.903 |
Mean | Stdev | |
slide-2-GCGC | -0.221 | 0.484 |
Mean | Stdev | |
tilt-2-GCGC | 0.000 | 4.539 |
Mean | Stdev | |
twist-2-GCGC | 33.897 | 4.774 |
Mean | Stdev | |
rise-3-CGCG | 3.119 | 0.330 |
Mean | Stdev | |
roll-3-CGCG | 6.124 | 6.491 |
Mean | Stdev | |
shift-3-CGCG | 0.000 | 1.084 |
Mean | Stdev | |
slide-3-CGCG | 0.117 | 0.553 |
Mean | Stdev | |
tilt-3-CGCG | 0.000 | 6.313 |
Mean | Stdev | |
twist-3-CGCG | 32.455 | 7.352 |
Mean | Stdev | |
rise-4-GATC | 3.381 | 0.308 |
Mean | Stdev | |
roll-4-GATC | 2.476 | 5.632 |
Mean | Stdev | |
shift-4-GATC | 0.000 | 0.966 |
Mean | Stdev | |
slide-4-GATC | -0.032 | 0.637 |
Mean | Stdev | |
tilt-4-GATC | 0.000 | 4.942 |
Mean | Stdev | |
twist-4-GATC | 35.454 | 5.815 |
Mean | Stdev | |
rise-5-AATT | 3.367 | 0.292 |
Mean | Stdev | |
roll-5-AATT | 1.025 | 5.100 |
Mean | Stdev | |
shift-5-AATT | 0.000 | 0.684 |
Mean | Stdev | |
slide-5-AATT | -0.499 | 0.552 |
Mean | Stdev | |
tilt-5-AATT | 0.000 | 4.673 |
Mean | Stdev | |
twist-5-AATT | 36.016 | 4.674 |
Mean | Stdev | |
rise-6-ATAT | 3.368 | 0.263 |
Mean | Stdev | |
roll-6-ATAT | -1.876 | 4.169 |
Mean | Stdev | |
shift-6-ATAT | 0.000 | 0.516 |
Mean | Stdev | |
slide-6-ATAT | -0.972 | 0.382 |
Mean | Stdev | |
tilt-6-ATAT | 0.000 | 3.544 |
Mean | Stdev | |
twist-6-ATAT | 32.955 | 3.169 |
Mean | Stdev | |
rise-7-TTAA | 3.374 | 0.294 |
Mean | Stdev | |
roll-7-TTAA | 1.125 | 5.059 |
Mean | Stdev | |
shift-7-TTAA | 0.000 | 0.690 |
Mean | Stdev | |
slide-7-TTAA | -0.512 | 0.542 |
Mean | Stdev | |
tilt-7-TTAA | 0.000 | 4.682 |
Mean | Stdev | |
twist-7-TTAA | 36.137 | 4.807 |
Mean | Stdev | |
rise-8-TCGA | 3.381 | 0.307 |
Mean | Stdev | |
roll-8-TCGA | 2.699 | 5.564 |
Mean | Stdev | |
shift-8-TCGA | 0.000 | 0.972 |
Mean | Stdev | |
slide-8-TCGA | -0.025 | 0.635 |
Mean | Stdev | |
tilt-8-TCGA | 0.000 | 4.892 |
Mean | Stdev | |
twist-8-TCGA | 35.507 | 5.727 |
Mean | Stdev | |
rise-9-CGCG | 3.119 | 0.332 |
Mean | Stdev | |
roll-9-CGCG | 6.130 | 6.512 |
Mean | Stdev | |
shift-9-CGCG | 0.000 | 1.108 |
Mean | Stdev | |
slide-9-CGCG | 0.130 | 0.553 |
Mean | Stdev | |
tilt-9-CGCG | 0.000 | 6.438 |
Mean | Stdev | |
twist-9-CGCG | 32.482 | 7.409 |