NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.465	0.000	0.000	-0.062	0.000	0.000
Slide	0.000	2.975	1.341	0.000	-0.064	-0.183
Rise	0.000	1.341	7.741	0.000	-0.051	-0.167
Tilt	-0.062	0.000	0.000	0.029	0.000	0.000
Roll	0.000	-0.064	-0.051	0.000	0.024	0.006
Twist	0.000	-0.183	-0.167	0.000	0.006	0.040

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	2.261	0.000	0.000	-0.005	0.000	0.000
Slide	0.000	5.227	2.576	0.000	-0.020	-0.194
Rise	0.000	2.576	10.226	0.000	0.047	-0.140
Tilt	-0.005	0.000	0.000	0.047	0.000	0.000
Roll	0.000	-0.020	0.047	0.000	0.034	0.008
Twist	0.000	-0.194	-0.140	0.000	0.008	0.065

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.039	0.000	0.000	-0.119	0.000	0.000
Slide	0.000	2.637	0.455	0.000	0.008	-0.119
Rise	0.000	0.455	8.457	0.000	-0.095	-0.239
Tilt	-0.119	0.000	0.000	0.027	0.000	0.000
Roll	0.000	0.008	-0.095	0.000	0.017	0.007
Twist	0.000	-0.119	-0.239	0.000	0.007	0.024

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.964	0.000	0.000	-0.111	0.000	0.000
Slide	0.000	2.837	0.369	0.000	0.013	-0.129
Rise	0.000	0.368	8.415	0.000	-0.093	-0.237
Tilt	-0.111	0.000	0.000	0.027	0.000	0.000
Roll	0.000	0.013	-0.093	0.000	0.017	0.007
Twist	0.000	-0.129	-0.237	0.000	0.007	0.024

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.809	0.000	0.000	-0.082	0.000	0.000
Slide	0.000	2.078	1.468	0.000	-0.032	-0.128
Rise	0.000	1.468	7.753	0.000	-0.049	-0.175
Tilt	-0.082	0.000	0.000	0.033	0.000	0.000
Roll	0.000	-0.032	-0.049	0.000	0.021	0.009
Twist	0.000	-0.128	-0.175	0.000	0.009	0.029

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.020	0.000	0.000	-0.114	0.000	0.000
Slide	0.000	3.231	2.380	0.000	0.075	-0.088
Rise	0.000	2.380	11.074	0.000	0.132	-0.235
Tilt	-0.114	0.000	0.000	0.041	0.000	0.000
Roll	0.000	0.075	0.132	0.000	0.023	0.004
Twist	0.000	-0.088	-0.235	0.000	0.004	0.031

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.104	0.000	0.000	-0.121	0.000	0.000
Slide	0.000	3.540	2.464	0.000	0.066	-0.097
Rise	0.000	2.464	10.593	0.000	0.121	-0.193
Tilt	-0.121	0.000	0.000	0.042	0.000	0.000
Roll	0.000	0.066	0.121	0.000	0.023	0.004
Twist	0.000	-0.097	-0.193	0.000	0.004	0.023

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.792	0.000	0.000	-0.082	0.000	0.000
Slide	0.000	2.074	1.284	0.000	-0.041	-0.120
Rise	0.000	1.284	7.549	0.000	-0.052	-0.171
Tilt	-0.082	0.000	0.000	0.033	0.000	0.000
Roll	0.000	-0.041	-0.052	0.000	0.024	0.011
Twist	0.000	-0.120	-0.171	0.000	0.011	0.030

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.489	0.000	0.000	-0.066	0.000	0.000
Slide	0.000	3.215	1.421	0.000	-0.065	-0.208
Rise	0.000	1.421	7.768	0.000	-0.039	-0.157
Tilt	-0.066	0.000	0.000	0.030	0.000	0.000
Roll	0.000	-0.065	-0.039	0.000	0.025	0.007
Twist	0.000	-0.208	-0.157	0.000	0.007	0.044

[Image courtesy of Curves+]

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	Mean	Stdev
-aatt.5.cte	0.000	0.000

	Mean	Stdev
-atat.6.cte	0.000	0.000

	Mean	Stdev
-cgcg.3.cte	0.000	0.000

	Mean	Stdev
-cgcg.9.cte	0.000	0.000

	Mean	Stdev
-gatc.4.cte	0.000	0.000

	Mean	Stdev
-gcgc.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
-tcga.8.cte	0.000	0.000

	Mean	Stdev
-ttaa.7.cte	0.000	0.000

	Mean	Stdev
rise-10-GCGC	3.391	0.276

	Mean	Stdev
roll-10-GCGC	-2.540	5.602

	Mean	Stdev
shift-10-GCGC	0.000	0.913

	Mean	Stdev
slide-10-GCGC	-0.249	0.483

	Mean	Stdev
tilt-10-GCGC	0.000	4.541

	Mean	Stdev
twist-10-GCGC	33.447	5.044

	Mean	Stdev
rise-2-GCGC	3.376	0.279

	Mean	Stdev
roll-2-GCGC	-1.898	5.594

	Mean	Stdev
shift-2-GCGC	0.000	0.883

	Mean	Stdev
slide-2-GCGC	-0.263	0.467

	Mean	Stdev
tilt-2-GCGC	0.000	4.535

	Mean	Stdev
twist-2-GCGC	31.756	5.890

	Mean	Stdev
rise-3-CGCG	3.136	0.319

	Mean	Stdev
roll-3-CGCG	6.221	6.565

	Mean	Stdev
shift-3-CGCG	0.000	1.067

	Mean	Stdev
slide-3-CGCG	0.167	0.564

	Mean	Stdev
tilt-3-CGCG	0.000	6.605

	Mean	Stdev
twist-3-CGCG	33.536	7.239

	Mean	Stdev
rise-4-GATC	3.391	0.303

	Mean	Stdev
roll-4-GATC	2.321	5.670

	Mean	Stdev
shift-4-GATC	0.000	0.988

	Mean	Stdev
slide-4-GATC	-0.006	0.640

	Mean	Stdev
tilt-4-GATC	0.000	4.929

	Mean	Stdev
twist-4-GATC	35.513	5.834

	Mean	Stdev
rise-5-AATT	3.357	0.292

	Mean	Stdev
roll-5-AATT	1.358	5.161

	Mean	Stdev
shift-5-AATT	0.000	0.664

	Mean	Stdev
slide-5-AATT	-0.491	0.535

	Mean	Stdev
tilt-5-AATT	0.000	4.714

	Mean	Stdev
twist-5-AATT	36.088	4.592

	Mean	Stdev
rise-6-ATAT	3.360	0.258

	Mean	Stdev
roll-6-ATAT	-1.748	4.243

	Mean	Stdev
shift-6-ATAT	0.000	0.509

	Mean	Stdev
slide-6-ATAT	-0.960	0.375

	Mean	Stdev
tilt-6-ATAT	0.000	3.523

	Mean	Stdev
twist-6-ATAT	32.780	3.223

	Mean	Stdev
rise-7-TTAA	3.380	0.289

	Mean	Stdev
roll-7-TTAA	1.187	4.951

	Mean	Stdev
shift-7-TTAA	0.000	0.661

	Mean	Stdev
slide-7-TTAA	-0.523	0.526

	Mean	Stdev
tilt-7-TTAA	0.000	4.666

	Mean	Stdev
twist-7-TTAA	36.314	4.472

	Mean	Stdev
rise-8-TCGA	3.381	0.304

	Mean	Stdev
roll-8-TCGA	2.434	5.380

	Mean	Stdev
shift-8-TCGA	0.000	0.997

	Mean	Stdev
slide-8-TCGA	0.051	0.618

	Mean	Stdev
tilt-8-TCGA	0.000	4.867

	Mean	Stdev
twist-8-TCGA	35.949	5.603

	Mean	Stdev
rise-9-CGCG	3.109	0.321

	Mean	Stdev
roll-9-CGCG	6.268	6.510

	Mean	Stdev
shift-9-CGCG	0.000	1.069

	Mean	Stdev
slide-9-CGCG	0.129	0.562

	Mean	Stdev
tilt-9-CGCG	0.000	6.332

	Mean	Stdev
twist-9-CGCG	32.430	7.428

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