Nucleic Acid Analysis - Stiffness Analysis
(Using Curves+ program)
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | |||||||||||||
5' | A | - | T | - | A | - | T | - | A | - | T | - | A | - | T | - | A | - | T | - | A | - | T | 3' |
| | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | x | | | ||||||
3' | T | - | A | - | T | - | A | - | T | - | A | - | T | - | A | - | T | - | A | - | T | - | A | 5' |
24 | 23 | 22 | 21 | 20 | 19 | 18 | 17 | 16 | 15 | 14 | 13 |
Interactive Sequence (see Help)
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Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 0.611 | 0.000 | 0.000 | 0.017 | 0.000 | 0.000 |
Slide | 0.000 | 0.729 | 0.183 | 0.000 | -0.005 | 0.009 |
Rise | 0.000 | 0.183 | 0.298 | 0.000 | -0.002 | 0.009 |
Tilt | 0.017 | 0.000 | 0.000 | 0.001 | 0.000 | 0.000 |
Roll | 0.000 | -0.005 | -0.002 | 0.000 | 0.000 | -0.000 |
Twist | 0.000 | 0.009 | 0.009 | 0.000 | -0.000 | 0.001 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
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Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 2.773 | 0.000 | 0.000 | 0.101 | 0.000 | 0.000 |
Slide | 0.000 | 3.262 | -1.134 | 0.000 | -0.034 | 0.014 |
Rise | 0.000 | -1.130 | 1.672 | 0.000 | 0.022 | -0.021 |
Tilt | 0.101 | 0.000 | 0.000 | 0.004 | 0.000 | 0.000 |
Roll | 0.000 | -0.034 | 0.022 | 0.000 | 0.001 | -0.000 |
Twist | 0.000 | 0.014 | -0.021 | 0.000 | -0.000 | 0.001 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
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Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 2.418 | 0.000 | 0.000 | 0.087 | 0.000 | 0.000 |
Slide | 0.000 | 2.698 | -0.403 | 0.000 | -0.021 | 0.009 |
Rise | 0.000 | -0.402 | 1.116 | 0.000 | 0.011 | -0.014 |
Tilt | 0.087 | 0.000 | 0.000 | 0.004 | 0.000 | 0.000 |
Roll | 0.000 | -0.021 | 0.011 | 0.000 | 0.000 | -0.000 |
Twist | 0.000 | 0.009 | -0.014 | 0.000 | -0.000 | 0.001 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
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Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 1.328 | 0.000 | 0.000 | 0.047 | 0.000 | 0.000 |
Slide | 0.000 | 1.167 | -0.334 | 0.000 | -0.015 | 0.005 |
Rise | 0.000 | -0.333 | 0.645 | 0.000 | 0.003 | -0.010 |
Tilt | 0.047 | 0.000 | 0.000 | 0.002 | 0.000 | 0.000 |
Roll | 0.000 | -0.015 | 0.003 | 0.000 | 0.000 | -0.000 |
Twist | 0.000 | 0.005 | -0.010 | 0.000 | -0.000 | 0.001 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
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Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 0.138 | 0.000 | 0.000 | -0.002 | 0.000 | 0.000 |
Slide | 0.000 | 0.132 | 0.060 | 0.000 | 0.001 | 0.002 |
Rise | 0.000 | 0.060 | 0.117 | 0.000 | -0.001 | -0.001 |
Tilt | -0.002 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
Roll | 0.000 | 0.001 | -0.001 | 0.000 | 0.000 | -0.000 |
Twist | 0.000 | 0.002 | -0.001 | 0.000 | -0.000 | 0.000 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
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Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 1.085 | 0.000 | 0.000 | -0.027 | 0.000 | 0.000 |
Slide | 0.000 | 0.753 | 0.059 | 0.000 | 0.043 | 0.003 |
Rise | 0.000 | 0.059 | 0.338 | 0.000 | -0.002 | -0.002 |
Tilt | -0.027 | 0.000 | 0.000 | 0.001 | 0.000 | 0.000 |
Roll | 0.000 | 0.043 | -0.002 | 0.000 | 0.004 | -0.000 |
Twist | 0.000 | 0.003 | -0.002 | 0.000 | -0.000 | 0.000 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
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Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 0.029 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
Slide | 0.000 | 0.420 | 0.212 | 0.000 | 0.027 | -0.003 |
Rise | 0.000 | 0.212 | 0.418 | 0.000 | 0.021 | -0.005 |
Tilt | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
Roll | 0.000 | 0.027 | 0.021 | 0.000 | 0.003 | -0.000 |
Twist | 0.000 | -0.003 | -0.005 | 0.000 | -0.000 | 0.000 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
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Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 2.279 | 0.000 | 0.000 | -0.045 | 0.000 | 0.000 |
Slide | 0.000 | 3.750 | 2.304 | 0.000 | 0.113 | 0.119 |
Rise | 0.000 | 2.287 | 2.061 | 0.000 | -0.011 | 0.092 |
Tilt | -0.045 | 0.000 | 0.000 | 0.001 | 0.000 | 0.000 |
Roll | 0.000 | 0.114 | -0.009 | 0.000 | 0.016 | -0.000 |
Twist | 0.000 | 0.118 | 0.093 | 0.000 | -0.000 | 0.006 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
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Shift | Slide | Rise | Tilt | Roll | Twist | |
Shift | 0.214 | 0.000 | 0.000 | -0.004 | 0.000 | 0.000 |
Slide | 0.000 | 0.260 | 0.082 | 0.000 | 0.011 | 0.004 |
Rise | 0.000 | 0.082 | 0.127 | 0.000 | 0.002 | -0.000 |
Tilt | -0.004 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
Roll | 0.000 | 0.011 | 0.002 | 0.000 | 0.001 | 0.000 |
Twist | 0.000 | 0.004 | -0.000 | 0.000 | 0.000 | 0.000 |
[Image courtesy of Curves+] |
Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Ų), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)
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Mean | Stdev | |
-atat.3.cte | 0.000 | 0.000 |
Mean | Stdev | |
-atat.5.cte | 0.000 | 0.000 |
Mean | Stdev | |
-atat.7.cte | 0.000 | 0.000 |
Mean | Stdev | |
-atat.9.cte | 0.000 | 0.000 |
Mean | Stdev | |
-tata.10.cte | 0.000 | 0.000 |
Mean | Stdev | |
-tata.2.cte | 0.000 | 0.000 |
Mean | Stdev | |
-tata.4.cte | 0.000 | 0.000 |
Mean | Stdev | |
-tata.6.cte | 0.000 | 0.000 |
Mean | Stdev | |
-tata.8.cte | 0.000 | 0.000 |
Mean | Stdev | |
rise-10-TATA | 2.944 | 2.958 |
Mean | Stdev | |
roll-10-TATA | 29.590 | 42.572 |
Mean | Stdev | |
shift-10-TATA | 0.000 | 2.399 |
Mean | Stdev | |
slide-10-TATA | -0.720 | 2.926 |
Mean | Stdev | |
tilt-10-TATA | 16.270 | 56.959 |
Mean | Stdev | |
twist-10-TATA | 34.693 | 44.781 |
Mean | Stdev | |
rise-2-TATA | 2.718 | 1.603 |
Mean | Stdev | |
roll-2-TATA | 62.779 | 32.939 |
Mean | Stdev | |
shift-2-TATA | 0.000 | 1.388 |
Mean | Stdev | |
slide-2-TATA | -2.978 | 2.272 |
Mean | Stdev | |
tilt-2-TATA | 7.855 | 33.103 |
Mean | Stdev | |
twist-2-TATA | 112.504 | 50.806 |
Mean | Stdev | |
rise-3-ATAT | 0.836 | 2.124 |
Mean | Stdev | |
roll-3-ATAT | 75.017 | 79.250 |
Mean | Stdev | |
shift-3-ATAT | 0.000 | 1.193 |
Mean | Stdev | |
slide-3-ATAT | -1.717 | 1.541 |
Mean | Stdev | |
tilt-3-ATAT | 0.493 | 23.951 |
Mean | Stdev | |
twist-3-ATAT | -13.801 | 32.770 |
Mean | Stdev | |
rise-4-TATA | 2.579 | 1.526 |
Mean | Stdev | |
roll-4-TATA | 67.601 | 23.097 |
Mean | Stdev | |
shift-4-TATA | 0.000 | 4.530 |
Mean | Stdev | |
slide-4-TATA | -0.717 | 1.774 |
Mean | Stdev | |
tilt-4-TATA | 9.734 | 40.248 |
Mean | Stdev | |
twist-4-TATA | 74.189 | 46.886 |
Mean | Stdev | |
rise-5-ATAT | 1.765 | 1.063 |
Mean | Stdev | |
roll-5-ATAT | 35.642 | 18.476 |
Mean | Stdev | |
shift-5-ATAT | 0.000 | 1.252 |
Mean | Stdev | |
slide-5-ATAT | -4.155 | 0.638 |
Mean | Stdev | |
tilt-5-ATAT | 0.020 | 32.060 |
Mean | Stdev | |
twist-5-ATAT | -1.906 | 36.768 |
Mean | Stdev | |
rise-6-TATA | 3.831 | 2.124 |
Mean | Stdev | |
roll-6-TATA | 50.183 | 25.442 |
Mean | Stdev | |
shift-6-TATA | 0.000 | 1.319 |
Mean | Stdev | |
slide-6-TATA | -1.679 | 2.652 |
Mean | Stdev | |
tilt-6-TATA | 13.450 | 41.372 |
Mean | Stdev | |
twist-6-TATA | 61.823 | 31.313 |
Mean | Stdev | |
rise-7-ATAT | 1.637 | 1.060 |
Mean | Stdev | |
roll-7-ATAT | 31.822 | 17.562 |
Mean | Stdev | |
shift-7-ATAT | 0.000 | 1.309 |
Mean | Stdev | |
slide-7-ATAT | -4.045 | 0.623 |
Mean | Stdev | |
tilt-7-ATAT | 0.000 | 33.535 |
Mean | Stdev | |
twist-7-ATAT | 0.649 | 38.960 |
Mean | Stdev | |
rise-8-TATA | 3.438 | 2.650 |
Mean | Stdev | |
roll-8-TATA | 57.932 | 40.013 |
Mean | Stdev | |
shift-8-TATA | 0.000 | 1.950 |
Mean | Stdev | |
slide-8-TATA | -1.886 | 2.806 |
Mean | Stdev | |
tilt-8-TATA | 12.533 | 45.064 |
Mean | Stdev | |
twist-8-TATA | 47.579 | 41.643 |
Mean | Stdev | |
rise-9-ATAT | 1.894 | 1.193 |
Mean | Stdev | |
roll-9-ATAT | 41.064 | 30.293 |
Mean | Stdev | |
shift-9-ATAT | 0.000 | 1.343 |
Mean | Stdev | |
slide-9-ATAT | -3.484 | 1.448 |
Mean | Stdev | |
tilt-9-ATAT | 0.095 | 33.071 |
Mean | Stdev | |
twist-9-ATAT | 5.465 | 38.919 |