NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.270	0.000	0.000	-0.087	0.000	0.000
Slide	0.000	2.682	1.280	0.000	-0.059	-0.175
Rise	0.000	1.280	8.245	0.000	-0.051	-0.153
Tilt	-0.087	0.000	0.000	0.033	0.000	0.000
Roll	0.000	-0.059	-0.051	0.000	0.023	0.009
Twist	0.000	-0.175	-0.153	0.000	0.009	0.040

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	2.278	0.000	0.000	0.016	0.000	0.000
Slide	0.000	5.738	2.420	0.000	-0.032	-0.257
Rise	0.000	2.420	10.605	0.000	0.044	-0.134
Tilt	0.016	0.000	0.000	0.048	0.000	0.000
Roll	0.000	-0.032	0.044	0.000	0.036	0.010
Twist	0.000	-0.257	-0.134	0.000	0.010	0.074

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.947	0.000	0.000	-0.105	0.000	0.000
Slide	0.000	2.746	0.400	0.000	0.015	-0.117
Rise	0.000	0.400	8.118	0.000	-0.088	-0.237
Tilt	-0.105	0.000	0.000	0.028	0.000	0.000
Roll	0.000	0.015	-0.088	0.000	0.016	0.007
Twist	0.000	-0.117	-0.237	0.000	0.007	0.024

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.983	0.000	0.000	-0.123	0.000	0.000
Slide	0.000	2.738	0.626	0.000	0.010	-0.115
Rise	0.000	0.626	7.707	0.000	-0.090	-0.232
Tilt	-0.123	0.000	0.000	0.029	0.000	0.000
Roll	0.000	0.010	-0.090	0.000	0.017	0.008
Twist	0.000	-0.115	-0.232	0.000	0.008	0.024

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.850	0.000	0.000	-0.088	0.000	0.000
Slide	0.000	2.179	1.345	0.000	-0.028	-0.127
Rise	0.000	1.345	7.692	0.000	-0.055	-0.176
Tilt	-0.088	0.000	0.000	0.033	0.000	0.000
Roll	0.000	-0.028	-0.055	0.000	0.020	0.010
Twist	0.000	-0.127	-0.176	0.000	0.010	0.029

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.057	0.000	0.000	-0.098	0.000	0.000
Slide	0.000	3.123	1.786	0.000	0.055	-0.077
Rise	0.000	1.786	8.790	0.000	0.092	-0.150
Tilt	-0.098	0.000	0.000	0.040	0.000	0.000
Roll	0.000	0.055	0.092	0.000	0.024	0.009
Twist	0.000	-0.077	-0.150	0.000	0.009	0.032

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.128	0.000	0.000	-0.111	0.000	0.000
Slide	0.000	2.670	2.293	0.000	0.080	-0.081
Rise	0.000	2.293	10.755	0.000	0.156	-0.233
Tilt	-0.111	0.000	0.000	0.041	0.000	0.000
Roll	0.000	0.080	0.156	0.000	0.023	0.004
Twist	0.000	-0.081	-0.233	0.000	0.004	0.032

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.759	0.000	0.000	-0.082	0.000	0.000
Slide	0.000	2.003	1.397	0.000	-0.029	-0.120
Rise	0.000	1.397	7.758	0.000	-0.058	-0.178
Tilt	-0.082	0.000	0.000	0.033	0.000	0.000
Roll	0.000	-0.029	-0.058	0.000	0.024	0.012
Twist	0.000	-0.120	-0.178	0.000	0.012	0.031

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.649	0.000	0.000	-0.072	0.000	0.000
Slide	0.000	3.546	1.511	0.000	-0.060	-0.249
Rise	0.000	1.511	8.072	0.000	-0.056	-0.158
Tilt	-0.072	0.000	0.000	0.033	0.000	0.000
Roll	0.000	-0.060	-0.056	0.000	0.026	0.007
Twist	0.000	-0.249	-0.158	0.000	0.007	0.049

[Image courtesy of Curves+]

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	Mean	Stdev
-aatt.5.cte	0.000	0.000

	Mean	Stdev
-atat.6.cte	0.000	0.000

	Mean	Stdev
-cgcg.3.cte	0.000	0.000

	Mean	Stdev
-cgcg.9.cte	0.000	0.000

	Mean	Stdev
-gatc.4.cte	0.000	0.000

	Mean	Stdev
-gcgc.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
-tcga.8.cte	0.000	0.000

	Mean	Stdev
-ttaa.7.cte	0.000	0.000

	Mean	Stdev
rise-10-GCGC	3.411	0.292

	Mean	Stdev
roll-10-GCGC	-0.905	5.748

	Mean	Stdev
shift-10-GCGC	0.000	0.846

	Mean	Stdev
slide-10-GCGC	-0.257	0.481

	Mean	Stdev
tilt-10-GCGC	0.000	4.334

	Mean	Stdev
twist-10-GCGC	32.994	5.137

	Mean	Stdev
rise-2-GCGC	3.396	0.287

	Mean	Stdev
roll-2-GCGC	-2.012	5.845

	Mean	Stdev
shift-2-GCGC	0.000	0.842

	Mean	Stdev
slide-2-GCGC	-0.279	0.544

	Mean	Stdev
tilt-2-GCGC	0.000	4.403

	Mean	Stdev
twist-2-GCGC	33.695	4.983

	Mean	Stdev
rise-3-CGCG	3.121	0.326

	Mean	Stdev
roll-3-CGCG	6.648	6.725

	Mean	Stdev
shift-3-CGCG	0.000	1.032

	Mean	Stdev
slide-3-CGCG	0.121	0.552

	Mean	Stdev
tilt-3-CGCG	0.000	6.002

	Mean	Stdev
twist-3-CGCG	32.533	7.193

	Mean	Stdev
rise-4-GATC	3.380	0.302

	Mean	Stdev
roll-4-GATC	2.098	5.979

	Mean	Stdev
shift-4-GATC	0.000	0.975

	Mean	Stdev
slide-4-GATC	-0.005	0.614

	Mean	Stdev
tilt-4-GATC	0.000	4.947

	Mean	Stdev
twist-4-GATC	35.596	5.939

	Mean	Stdev
rise-5-AATT	3.380	0.280

	Mean	Stdev
roll-5-AATT	1.072	5.339

	Mean	Stdev
shift-5-AATT	0.000	0.752

	Mean	Stdev
slide-5-AATT	-0.395	0.562

	Mean	Stdev
tilt-5-AATT	0.000	4.691

	Mean	Stdev
twist-5-AATT	36.424	4.657

	Mean	Stdev
rise-6-ATAT	3.332	0.249

	Mean	Stdev
roll-6-ATAT	-1.964	4.112

	Mean	Stdev
shift-6-ATAT	0.000	0.508

	Mean	Stdev
slide-6-ATAT	-0.939	0.362

	Mean	Stdev
tilt-6-ATAT	0.000	3.496

	Mean	Stdev
twist-6-ATAT	32.981	3.130

	Mean	Stdev
rise-7-TTAA	3.404	0.283

	Mean	Stdev
roll-7-TTAA	0.828	4.847

	Mean	Stdev
shift-7-TTAA	0.000	0.626

	Mean	Stdev
slide-7-TTAA	-0.549	0.516

	Mean	Stdev
tilt-7-TTAA	0.000	4.415

	Mean	Stdev
twist-7-TTAA	36.335	4.339

	Mean	Stdev
rise-8-TCGA	3.386	0.302

	Mean	Stdev
roll-8-TCGA	2.385	5.514

	Mean	Stdev
shift-8-TCGA	0.000	1.029

	Mean	Stdev
slide-8-TCGA	0.001	0.633

	Mean	Stdev
tilt-8-TCGA	0.000	4.931

	Mean	Stdev
twist-8-TCGA	36.062	5.538

	Mean	Stdev
rise-9-CGCG	3.153	0.332

	Mean	Stdev
roll-9-CGCG	6.229	6.741

	Mean	Stdev
shift-9-CGCG	0.000	1.128

	Mean	Stdev
slide-9-CGCG	0.151	0.544

	Mean	Stdev
tilt-9-CGCG	0.000	6.584

	Mean	Stdev
twist-9-CGCG	33.172	7.278

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