NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.627	0.000	0.000	-0.050	0.000	0.000
Slide	0.000	3.160	1.087	0.000	-0.060	-0.175
Rise	0.000	1.087	7.849	0.000	-0.036	-0.135
Tilt	-0.050	0.000	0.000	0.037	0.000	0.000
Roll	0.000	-0.060	-0.036	0.000	0.025	0.008
Twist	0.000	-0.175	-0.135	0.000	0.008	0.044

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	2.656	0.000	0.000	0.014	0.000	0.000
Slide	0.000	6.949	2.466	0.000	-0.054	-0.330
Rise	0.000	2.466	12.539	0.000	0.055	-0.091
Tilt	0.014	0.000	0.000	0.049	0.000	0.000
Roll	0.000	-0.054	0.055	0.000	0.039	0.006
Twist	0.000	-0.330	-0.091	0.000	0.006	0.086

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.056	0.000	0.000	-0.086	0.000	0.000
Slide	0.000	2.864	0.314	0.000	0.023	-0.134
Rise	0.000	0.313	7.956	0.000	-0.111	-0.237
Tilt	-0.086	0.000	0.000	0.023	0.000	0.000
Roll	0.000	0.023	-0.111	0.000	0.018	0.008
Twist	0.000	-0.134	-0.237	0.000	0.008	0.028

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.886	0.000	0.000	-0.118	0.000	0.000
Slide	0.000	3.040	0.268	0.000	0.014	-0.126
Rise	0.000	0.268	8.444	0.000	-0.085	-0.235
Tilt	-0.118	0.000	0.000	0.030	0.000	0.000
Roll	0.000	0.014	-0.085	0.000	0.017	0.008
Twist	0.000	-0.126	-0.236	0.000	0.008	0.025

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.740	0.000	0.000	-0.065	0.000	0.000
Slide	0.000	2.233	1.568	0.000	-0.061	-0.169
Rise	0.000	1.568	7.099	0.000	-0.052	-0.142
Tilt	-0.065	0.000	0.000	0.030	0.000	0.000
Roll	0.000	-0.061	-0.052	0.000	0.022	0.009
Twist	0.000	-0.169	-0.142	0.000	0.009	0.027

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.212	0.000	0.000	-0.128	0.000	0.000
Slide	0.000	3.079	2.646	0.000	0.076	-0.085
Rise	0.000	2.646	11.397	0.000	0.141	-0.249
Tilt	-0.128	0.000	0.000	0.043	0.000	0.000
Roll	0.000	0.076	0.141	0.000	0.027	0.006
Twist	0.000	-0.085	-0.249	0.000	0.006	0.038

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.747	0.000	0.000	-0.115	0.000	0.000
Slide	0.000	4.272	2.643	0.000	0.096	-0.137
Rise	0.000	2.643	11.241	0.000	0.157	-0.223
Tilt	-0.115	0.000	0.000	0.044	0.000	0.000
Roll	0.000	0.096	0.157	0.000	0.021	0.002
Twist	0.000	-0.137	-0.223	0.000	0.002	0.034

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.826	0.000	0.000	-0.088	0.000	0.000
Slide	0.000	2.059	1.444	0.000	-0.030	-0.117
Rise	0.000	1.444	7.933	0.000	-0.065	-0.187
Tilt	-0.088	0.000	0.000	0.034	0.000	0.000
Roll	0.000	-0.030	-0.065	0.000	0.023	0.012
Twist	0.000	-0.117	-0.187	0.000	0.012	0.031

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.337	0.000	0.000	-0.093	0.000	0.000
Slide	0.000	3.273	1.446	0.000	-0.066	-0.205
Rise	0.000	1.446	7.839	0.000	-0.055	-0.140
Tilt	-0.093	0.000	0.000	0.037	0.000	0.000
Roll	0.000	-0.066	-0.055	0.000	0.027	0.006
Twist	0.000	-0.205	-0.140	0.000	0.006	0.043

[Image courtesy of Curves+]

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	Mean	Stdev
-aatt.5.cte	0.000	0.000

	Mean	Stdev
-atat.6.cte	0.000	0.000

	Mean	Stdev
-cgcg.3.cte	0.000	0.000

	Mean	Stdev
-cgcg.9.cte	0.000	0.000

	Mean	Stdev
-gatc.4.cte	0.000	0.000

	Mean	Stdev
-gcgc.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
-tcga.8.cte	0.000	0.000

	Mean	Stdev
-ttaa.7.cte	0.000	0.000

	Mean	Stdev
rise-10-GCGC	3.392	0.277

	Mean	Stdev
roll-10-GCGC	-1.523	5.244

	Mean	Stdev
shift-10-GCGC	0.000	0.842

	Mean	Stdev
slide-10-GCGC	-0.284	0.502

	Mean	Stdev
tilt-10-GCGC	0.000	4.489

	Mean	Stdev
twist-10-GCGC	34.048	4.527

	Mean	Stdev
rise-2-GCGC	3.400	0.267

	Mean	Stdev
roll-2-GCGC	-3.845	5.915

	Mean	Stdev
shift-2-GCGC	0.000	1.146

	Mean	Stdev
slide-2-GCGC	-0.243	0.433

	Mean	Stdev
tilt-2-GCGC	0.000	4.730

	Mean	Stdev
twist-2-GCGC	32.480	4.742

	Mean	Stdev
rise-3-CGCG	3.122	0.322

	Mean	Stdev
roll-3-CGCG	7.854	6.455

	Mean	Stdev
shift-3-CGCG	0.000	0.888

	Mean	Stdev
slide-3-CGCG	0.021	0.550

	Mean	Stdev
tilt-3-CGCG	0.000	5.972

	Mean	Stdev
twist-3-CGCG	32.559	6.479

	Mean	Stdev
rise-4-GATC	3.440	0.314

	Mean	Stdev
roll-4-GATC	2.310	5.493

	Mean	Stdev
shift-4-GATC	0.000	0.990

	Mean	Stdev
slide-4-GATC	-0.392	0.732

	Mean	Stdev
tilt-4-GATC	0.000	4.907

	Mean	Stdev
twist-4-GATC	32.556	6.709

	Mean	Stdev
rise-5-AATT	3.361	0.283

	Mean	Stdev
roll-5-AATT	2.064	5.066

	Mean	Stdev
shift-5-AATT	0.000	0.613

	Mean	Stdev
slide-5-AATT	-0.595	0.495

	Mean	Stdev
tilt-5-AATT	0.000	4.078

	Mean	Stdev
twist-5-AATT	36.350	4.248

	Mean	Stdev
rise-6-ATAT	3.291	0.226

	Mean	Stdev
roll-6-ATAT	-2.121	3.922

	Mean	Stdev
shift-6-ATAT	0.000	0.470

	Mean	Stdev
slide-6-ATAT	-0.982	0.333

	Mean	Stdev
tilt-6-ATAT	0.000	3.467

	Mean	Stdev
twist-6-ATAT	33.104	2.889

	Mean	Stdev
rise-7-TTAA	3.402	0.287

	Mean	Stdev
roll-7-TTAA	0.571	4.798

	Mean	Stdev
shift-7-TTAA	0.000	0.728

	Mean	Stdev
slide-7-TTAA	-0.493	0.521

	Mean	Stdev
tilt-7-TTAA	0.000	4.371

	Mean	Stdev
twist-7-TTAA	36.467	4.457

	Mean	Stdev
rise-8-TCGA	3.378	0.301

	Mean	Stdev
roll-8-TCGA	2.527	5.615

	Mean	Stdev
shift-8-TCGA	0.000	0.992

	Mean	Stdev
slide-8-TCGA	-0.081	0.619

	Mean	Stdev
tilt-8-TCGA	0.000	4.896

	Mean	Stdev
twist-8-TCGA	35.454	5.595

	Mean	Stdev
rise-9-CGCG	3.128	0.314

	Mean	Stdev
roll-9-CGCG	5.806	6.695

	Mean	Stdev
shift-9-CGCG	0.000	1.172

	Mean	Stdev
slide-9-CGCG	0.168	0.527

	Mean	Stdev
tilt-9-CGCG	0.000	6.327

	Mean	Stdev
twist-9-CGCG	32.698	6.991

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