Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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5' |
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112 |
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111 |
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110 |
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109 |
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Interactive Sequence (see Help)
| Mean | Stdev |
| 1_H41-112_O6-1 | 6.832 | 6.798 |
| Mean | Stdev |
| 1_N3-112_H1-1 | 5.893 | 5.373 |
| Mean | Stdev |
| 1_O2-112_H21-1 | 5.146 | 4.288 |
| Mean | Stdev |
| 10_H41-103_O6-10 | 1.992 | 0.169 |
| Mean | Stdev |
| 10_N3-103_H1-10 | 1.948 | 0.090 |
| Mean | Stdev |
| 10_O2-103_H21-10 | 1.885 | 0.120 |
| Mean | Stdev |
| 11_H3-102_N1-11 | 1.955 | 0.114 |
| Mean | Stdev |
| 11_O4-102_H61-11 | 2.032 | 0.229 |
| Mean | Stdev |
| 12_H61-101_O4-12 | 1.985 | 0.182 |
| Mean | Stdev |
| 12_N1-101_H3-12 | 1.977 | 0.130 |
| Mean | Stdev |
| 13_H61-100_O4-13 | 1.985 | 0.177 |
| Mean | Stdev |
| 13_N1-100_H3-13 | 1.974 | 0.123 |
| Mean | Stdev |
| 14_H41-99_O6-14 | 2.002 | 0.239 |
| Mean | Stdev |
| 14_N3-99_H1-14 | 1.972 | 0.142 |
| Mean | Stdev |
| 14_O2-99_H21-14 | 1.903 | 0.141 |
| Mean | Stdev |
| 15_H1-98_N3-15 | 1.948 | 0.122 |
| Mean | Stdev |
| 15_H21-98_O2-15 | 1.885 | 0.119 |
| Mean | Stdev |
| 15_O6-98_H41-15 | 1.969 | 0.251 |
| Mean | Stdev |
| 16_H1-97_N3-16 | 1.956 | 0.093 |
| Mean | Stdev |
| 16_H21-97_O2-16 | 1.924 | 0.134 |
| Mean | Stdev |
| 16_O6-97_H41-16 | 1.972 | 0.157 |
| Mean | Stdev |
| 17_H61-96_O4-17 | 1.970 | 0.187 |
| Mean | Stdev |
| 17_N1-96_H3-17 | 1.998 | 0.134 |
| Mean | Stdev |
| 18_H41-95_O6-18 | 1.996 | 0.184 |
| Mean | Stdev |
| 18_N3-95_H1-18 | 1.970 | 0.102 |
| Mean | Stdev |
| 18_O2-95_H21-18 | 1.896 | 0.127 |
| Mean | Stdev |
| 19_H61-94_O4-19 | 1.998 | 0.195 |
| Mean | Stdev |
| 19_N1-94_H3-19 | 1.964 | 0.115 |
| Mean | Stdev |
| 2_H1-111_N3-2 | 1.952 | 0.087 |
| Mean | Stdev |
| 2_H21-111_O2-2 | 1.905 | 0.133 |
| Mean | Stdev |
| 2_O6-111_H41-2 | 1.953 | 0.148 |
| Mean | Stdev |
| 20_H1-93_N3-20 | 1.947 | 0.090 |
| Mean | Stdev |
| 20_H21-93_O2-20 | 1.884 | 0.117 |
| Mean | Stdev |
| 20_O6-93_H41-20 | 1.996 | 0.174 |
| Mean | Stdev |
| 21_H1-92_N3-21 | 1.950 | 0.091 |
| Mean | Stdev |
| 21_H21-92_O2-21 | 1.900 | 0.124 |
| Mean | Stdev |
| 21_O6-92_H41-21 | 1.966 | 0.161 |
| Mean | Stdev |
| 22_H41-91_O6-22 | 1.991 | 0.199 |
| Mean | Stdev |
| 22_N3-91_H1-22 | 1.956 | 0.106 |
| Mean | Stdev |
| 22_O2-91_H21-22 | 1.882 | 0.118 |
| Mean | Stdev |
| 23_H61-90_O4-23 | 2.026 | 0.213 |
| Mean | Stdev |
| 23_N1-90_H3-23 | 1.975 | 0.118 |
| Mean | Stdev |
| 24_H3-89_N1-24 | 1.988 | 0.156 |
| Mean | Stdev |
| 24_O4-89_H61-24 | 2.036 | 0.235 |
| Mean | Stdev |
| 25_H61-88_O4-25 | 2.046 | 0.247 |
| Mean | Stdev |
| 25_N1-88_H3-25 | 1.966 | 0.123 |
| Mean | Stdev |
| 26_H1-87_N3-26 | 1.960 | 0.095 |
| Mean | Stdev |
| 26_H21-87_O2-26 | 1.909 | 0.125 |
| Mean | Stdev |
| 26_O6-87_H41-26 | 2.002 | 0.176 |
| Mean | Stdev |
| 27_H61-86_O4-27 | 1.996 | 0.203 |
| Mean | Stdev |
| 27_N1-86_H3-27 | 1.977 | 0.120 |
| Mean | Stdev |
| 28_H41-85_O6-28 | 1.996 | 0.175 |
| Mean | Stdev |
| 28_N3-85_H1-28 | 1.960 | 0.095 |
| Mean | Stdev |
| 28_O2-85_H21-28 | 1.882 | 0.123 |
| Mean | Stdev |
| 29_H1-84_N3-29 | 1.955 | 0.095 |
| Mean | Stdev |
| 29_H21-84_O2-29 | 1.884 | 0.116 |
| Mean | Stdev |
| 29_O6-84_H41-29 | 1.996 | 0.170 |
| Mean | Stdev |
| 3_H41-110_O6-3 | 1.963 | 0.166 |
| Mean | Stdev |
| 3_N3-110_H1-3 | 1.963 | 0.090 |
| Mean | Stdev |
| 3_O2-110_H21-3 | 1.910 | 0.123 |
| Mean | Stdev |
| 30_H3-83_N1-30 | 1.981 | 0.131 |
| Mean | Stdev |
| 30_O4-83_H61-30 | 1.994 | 0.194 |
| Mean | Stdev |
| 31_H41-82_O6-31 | 1.996 | 0.173 |
| Mean | Stdev |
| 31_N3-82_H1-31 | 1.957 | 0.091 |
| Mean | Stdev |
| 31_O2-82_H21-31 | 1.915 | 0.132 |
| Mean | Stdev |
| 32_H3-81_N1-32 | 1.967 | 0.118 |
| Mean | Stdev |
| 32_O4-81_H61-32 | 2.038 | 0.250 |
| Mean | Stdev |
| 33_H61-80_O4-33 | 2.034 | 0.222 |
| Mean | Stdev |
| 33_N1-80_H3-33 | 1.987 | 0.129 |
| Mean | Stdev |
| 34_H3-79_N1-34 | 1.968 | 0.123 |
| Mean | Stdev |
| 34_O4-79_H61-34 | 2.061 | 0.259 |
| Mean | Stdev |
| 35_H1-78_N3-35 | 1.952 | 0.089 |
| Mean | Stdev |
| 35_H21-78_O2-35 | 1.889 | 0.116 |
| Mean | Stdev |
| 35_O6-78_H41-35 | 1.983 | 0.169 |
| Mean | Stdev |
| 36_H41-77_O6-36 | 1.982 | 0.171 |
| Mean | Stdev |
| 36_N3-77_H1-36 | 1.945 | 0.087 |
| Mean | Stdev |
| 36_O2-77_H21-36 | 1.903 | 0.119 |
| Mean | Stdev |
| 37_H41-76_O6-37 | 2.014 | 0.191 |
| Mean | Stdev |
| 37_N3-76_H1-37 | 1.950 | 0.098 |
| Mean | Stdev |
| 37_O2-76_H21-37 | 1.887 | 0.117 |
| Mean | Stdev |
| 38_H3-75_N1-38 | 1.965 | 0.112 |
| Mean | Stdev |
| 38_O4-75_H61-38 | 1.988 | 0.177 |
| Mean | Stdev |
| 39_H1-74_N3-39 | 1.965 | 0.105 |
| Mean | Stdev |
| 39_H21-74_O2-39 | 1.896 | 0.118 |
| Mean | Stdev |
| 39_O6-74_H41-39 | 1.998 | 0.186 |
| Mean | Stdev |
| 4_H1-109_N3-4 | 1.946 | 0.086 |
| Mean | Stdev |
| 4_H21-109_O2-4 | 1.876 | 0.116 |
| Mean | Stdev |
| 4_O6-109_H41-4 | 1.983 | 0.166 |
| Mean | Stdev |
| 40_H3-73_N1-40 | 1.974 | 0.126 |
| Mean | Stdev |
| 40_O4-73_H61-40 | 1.964 | 0.177 |
| Mean | Stdev |
| 41_H41-72_O6-41 | 1.978 | 0.166 |
| Mean | Stdev |
| 41_N3-72_H1-41 | 1.959 | 0.091 |
| Mean | Stdev |
| 41_O2-72_H21-41 | 1.919 | 0.136 |
| Mean | Stdev |
| 42_H41-71_O6-42 | 1.959 | 0.148 |
| Mean | Stdev |
| 42_N3-71_H1-42 | 1.946 | 0.088 |
| Mean | Stdev |
| 42_O2-71_H21-42 | 1.887 | 0.127 |
| Mean | Stdev |
| 43_H1-70_N3-43 | 1.956 | 0.097 |
| Mean | Stdev |
| 43_H21-70_O2-43 | 1.903 | 0.133 |
| Mean | Stdev |
| 43_O6-70_H41-43 | 1.991 | 0.178 |
| Mean | Stdev |
| 44_H3-69_N1-44 | 1.968 | 0.117 |
| Mean | Stdev |
| 44_O4-69_H61-44 | 1.989 | 0.183 |
| Mean | Stdev |
| 45_H3-68_N1-45 | 1.964 | 0.121 |
| Mean | Stdev |
| 45_O4-68_H61-45 | 2.002 | 0.206 |
| Mean | Stdev |
| 46_H61-67_O4-46 | 2.035 | 0.225 |
| Mean | Stdev |
| 46_N1-67_H3-46 | 1.962 | 0.115 |
| Mean | Stdev |
| 47_H1-66_N3-47 | 1.948 | 0.085 |
| Mean | Stdev |
| 47_H21-66_O2-47 | 1.891 | 0.111 |
| Mean | Stdev |
| 47_O6-66_H41-47 | 1.966 | 0.160 |
| Mean | Stdev |
| 48_H1-65_N3-48 | 1.946 | 0.086 |
| Mean | Stdev |
| 48_H21-65_O2-48 | 1.887 | 0.117 |
| Mean | Stdev |
| 48_O6-65_H41-48 | 1.953 | 0.152 |
| Mean | Stdev |
| 49_H41-64_O6-49 | 1.999 | 0.207 |
| Mean | Stdev |
| 49_N3-64_H1-49 | 1.969 | 0.113 |
| Mean | Stdev |
| 49_O2-64_H21-49 | 1.885 | 0.122 |
| Mean | Stdev |
| 5_H61-108_O4-5 | 1.974 | 0.174 |
| Mean | Stdev |
| 5_N1-108_H3-5 | 2.003 | 0.132 |
| Mean | Stdev |
| 50_H61-63_O4-50 | 2.003 | 0.201 |
| Mean | Stdev |
| 50_N1-63_H3-50 | 1.967 | 0.142 |
| Mean | Stdev |
| 51_H61-62_O4-51 | 1.974 | 0.162 |
| Mean | Stdev |
| 51_N1-62_H3-51 | 1.987 | 0.121 |
| Mean | Stdev |
| 52_H3-61_N1-52 | 1.994 | 0.114 |
| Mean | Stdev |
| 52_O4-61_H61-52 | 1.972 | 0.162 |
| Mean | Stdev |
| 53_H41-60_O6-53 | 1.982 | 0.174 |
| Mean | Stdev |
| 53_N3-60_H1-53 | 1.945 | 0.091 |
| Mean | Stdev |
| 53_O2-60_H21-53 | 1.887 | 0.123 |
| Mean | Stdev |
| 54_H1-59_N3-54 | 1.959 | 0.089 |
| Mean | Stdev |
| 54_H21-59_O2-54 | 1.908 | 0.129 |
| Mean | Stdev |
| 54_O6-59_H41-54 | 1.948 | 0.142 |
| Mean | Stdev |
| 55_H41-58_O6-55 | 1.952 | 0.154 |
| Mean | Stdev |
| 55_N3-58_H1-55 | 1.951 | 0.092 |
| Mean | Stdev |
| 55_O2-58_H21-55 | 1.892 | 0.121 |
| Mean | Stdev |
| 56_H1-57_N3-56 | 2.030 | 0.648 |
| Mean | Stdev |
| 56_H21-57_O2-56 | 1.996 | 0.647 |
| Mean | Stdev |
| 56_O6-57_H41-56 | 2.090 | 0.712 |
| Mean | Stdev |
| 6_H3-107_N1-6 | 1.989 | 0.130 |
| Mean | Stdev |
| 6_O4-107_H61-6 | 1.998 | 0.177 |
| Mean | Stdev |
| 7_H3-106_N1-7 | 1.959 | 0.114 |
| Mean | Stdev |
| 7_O4-106_H61-7 | 1.998 | 0.185 |
| Mean | Stdev |
| 8_H1-105_N3-8 | 1.962 | 0.098 |
| Mean | Stdev |
| 8_H21-105_O2-8 | 1.890 | 0.119 |
| Mean | Stdev |
| 8_O6-105_H41-8 | 1.983 | 0.182 |
| Mean | Stdev |
| 9_H41-104_O6-9 | 1.963 | 0.154 |
| Mean | Stdev |
| 9_N3-104_H1-9 | 1.950 | 0.086 |
| Mean | Stdev |
| 9_O2-104_H21-9 | 1.895 | 0.121 |
| Nucleotide Number | Hydrogen Bond | Mean | Stdev |
| 1 | H41-O6_1-112 | 6.8318 | 6.7975 |
| 1 | N3-H1_1-112 | 5.8932 | 5.3733 |
| 1 | O2-H21_1-112 | 5.1465 | 4.2877 |
| 2 | O6-H41_2-111 | 1.9534 | 0.1478 |
| 2 | H1-N3_2-111 | 1.9520 | 0.0869 |
| 2 | H21-O2_2-111 | 1.9046 | 0.1332 |
| 3 | H41-O6_3-110 | 1.9634 | 0.1659 |
| 3 | N3-H1_3-110 | 1.9631 | 0.0898 |
| 3 | O2-H21_3-110 | 1.9102 | 0.1227 |
| 4 | O6-H41_4-109 | 1.9832 | 0.1655 |
| 4 | H1-N3_4-109 | 1.9460 | 0.0857 |
| 4 | H21-O2_4-109 | 1.8758 | 0.1157 |
| 5 | N1-H3_5-108 | 2.0026 | 0.1318 |
| 5 | H61-O4_5-108 | 1.9741 | 0.1744 |
| 6 | H3-N1_6-107 | 1.9893 | 0.1300 |
| 6 | O4-H61_6-107 | 1.9982 | 0.1771 |
| 7 | H3-N1_7-106 | 1.9587 | 0.1140 |
| 7 | O4-H61_7-106 | 1.9980 | 0.1852 |
| 8 | O6-H41_8-105 | 1.9833 | 0.1818 |
| 8 | H1-N3_8-105 | 1.9615 | 0.0978 |
| 8 | H21-O2_8-105 | 1.8896 | 0.1187 |
| 9 | H41-O6_9-104 | 1.9630 | 0.1541 |
| 9 | N3-H1_9-104 | 1.9497 | 0.0855 |
| 9 | O2-H21_9-104 | 1.8950 | 0.1210 |
| 10 | H41-O6_10-103 | 1.9916 | 0.1688 |
| 10 | N3-H1_10-103 | 1.9476 | 0.0900 |
| 10 | O2-H21_10-103 | 1.8846 | 0.1200 |
| 11 | H3-N1_11-102 | 1.9552 | 0.1136 |
| 11 | O4-H61_11-102 | 2.0324 | 0.2294 |
| 12 | N1-H3_12-101 | 1.9768 | 0.1296 |
| 12 | H61-O4_12-101 | 1.9854 | 0.1823 |
| 13 | N1-H3_13-100 | 1.9741 | 0.1227 |
| 13 | H61-O4_13-100 | 1.9850 | 0.1772 |
| 14 | H41-O6_14-99 | 2.0018 | 0.2393 |
| 14 | N3-H1_14-99 | 1.9717 | 0.1417 |
| 14 | O2-H21_14-99 | 1.9027 | 0.1408 |
| 15 | O6-H41_15-98 | 1.9690 | 0.2509 |
| 15 | H1-N3_15-98 | 1.9475 | 0.1217 |
| 15 | H21-O2_15-98 | 1.8853 | 0.1192 |
| 16 | O6-H41_16-97 | 1.9722 | 0.1570 |
| 16 | H1-N3_16-97 | 1.9562 | 0.0926 |
| 16 | H21-O2_16-97 | 1.9243 | 0.1335 |
| 17 | N1-H3_17-96 | 1.9977 | 0.1338 |
| 17 | H61-O4_17-96 | 1.9702 | 0.1869 |
| 18 | H41-O6_18-95 | 1.9963 | 0.1837 |
| 18 | N3-H1_18-95 | 1.9695 | 0.1021 |
| 18 | O2-H21_18-95 | 1.8960 | 0.1267 |
| 19 | N1-H3_19-94 | 1.9636 | 0.1150 |
| 19 | H61-O4_19-94 | 1.9981 | 0.1945 |
| 20 | O6-H41_20-93 | 1.9958 | 0.1738 |
| 20 | H1-N3_20-93 | 1.9474 | 0.0897 |
| 20 | H21-O2_20-93 | 1.8836 | 0.1171 |
| 21 | O6-H41_21-92 | 1.9660 | 0.1612 |
| 21 | H1-N3_21-92 | 1.9504 | 0.0907 |
| 21 | H21-O2_21-92 | 1.8996 | 0.1244 |
| 22 | H41-O6_22-91 | 1.9906 | 0.1994 |
| 22 | N3-H1_22-91 | 1.9560 | 0.1056 |
| 22 | O2-H21_22-91 | 1.8817 | 0.1183 |
| 23 | N1-H3_23-90 | 1.9752 | 0.1185 |
| 23 | H61-O4_23-90 | 2.0258 | 0.2126 |
| 24 | H3-N1_24-89 | 1.9879 | 0.1559 |
| 24 | O4-H61_24-89 | 2.0356 | 0.2351 |
| 25 | N1-H3_25-88 | 1.9656 | 0.1234 |
| 25 | H61-O4_25-88 | 2.0460 | 0.2474 |
| 26 | O6-H41_26-87 | 2.0019 | 0.1765 |
| 26 | H1-N3_26-87 | 1.9598 | 0.0946 |
| 26 | H21-O2_26-87 | 1.9089 | 0.1253 |
| 27 | N1-H3_27-86 | 1.9770 | 0.1202 |
| 27 | H61-O4_27-86 | 1.9964 | 0.2029 |
| 28 | H41-O6_28-85 | 1.9962 | 0.1748 |
| 28 | N3-H1_28-85 | 1.9599 | 0.0954 |
| 28 | O2-H21_28-85 | 1.8818 | 0.1227 |
| 29 | O6-H41_29-84 | 1.9959 | 0.1702 |
| 29 | H1-N3_29-84 | 1.9547 | 0.0954 |
| 29 | H21-O2_29-84 | 1.8838 | 0.1164 |
| 30 | H3-N1_30-83 | 1.9814 | 0.1314 |
| 30 | O4-H61_30-83 | 1.9942 | 0.1937 |
| 31 | H41-O6_31-82 | 1.9965 | 0.1727 |
| 31 | N3-H1_31-82 | 1.9569 | 0.0914 |
| 31 | O2-H21_31-82 | 1.9150 | 0.1319 |
| 32 | H3-N1_32-81 | 1.9674 | 0.1180 |
| 32 | O4-H61_32-81 | 2.0384 | 0.2504 |
| 33 | N1-H3_33-80 | 1.9873 | 0.1289 |
| 33 | H61-O4_33-80 | 2.0341 | 0.2223 |
| 34 | H3-N1_34-79 | 1.9679 | 0.1231 |
| 34 | O4-H61_34-79 | 2.0607 | 0.2593 |
| 35 | O6-H41_35-78 | 1.9834 | 0.1691 |
| 35 | H1-N3_35-78 | 1.9515 | 0.0886 |
| 35 | H21-O2_35-78 | 1.8890 | 0.1156 |
| 36 | H41-O6_36-77 | 1.9819 | 0.1709 |
| 36 | N3-H1_36-77 | 1.9447 | 0.0875 |
| 36 | O2-H21_36-77 | 1.9035 | 0.1194 |
| 37 | H41-O6_37-76 | 2.0141 | 0.1910 |
| 37 | N3-H1_37-76 | 1.9503 | 0.0984 |
| 37 | O2-H21_37-76 | 1.8870 | 0.1171 |
| 38 | H3-N1_38-75 | 1.9653 | 0.1123 |
| 38 | O4-H61_38-75 | 1.9879 | 0.1771 |
| 39 | O6-H41_39-74 | 1.9983 | 0.1858 |
| 39 | H1-N3_39-74 | 1.9650 | 0.1052 |
| 39 | H21-O2_39-74 | 1.8964 | 0.1184 |
| 40 | H3-N1_40-73 | 1.9739 | 0.1261 |
| 40 | O4-H61_40-73 | 1.9644 | 0.1768 |
| 41 | H41-O6_41-72 | 1.9782 | 0.1658 |
| 41 | N3-H1_41-72 | 1.9590 | 0.0912 |
| 41 | O2-H21_41-72 | 1.9185 | 0.1359 |
| 42 | H41-O6_42-71 | 1.9589 | 0.1480 |
| 42 | N3-H1_42-71 | 1.9465 | 0.0877 |
| 42 | O2-H21_42-71 | 1.8874 | 0.1267 |
| 43 | O6-H41_43-70 | 1.9913 | 0.1776 |
| 43 | H1-N3_43-70 | 1.9556 | 0.0974 |
| 43 | H21-O2_43-70 | 1.9027 | 0.1325 |
| 44 | H3-N1_44-69 | 1.9677 | 0.1172 |
| 44 | O4-H61_44-69 | 1.9894 | 0.1828 |
| 45 | H3-N1_45-68 | 1.9636 | 0.1213 |
| 45 | O4-H61_45-68 | 2.0023 | 0.2058 |
| 46 | N1-H3_46-67 | 1.9623 | 0.1154 |
| 46 | H61-O4_46-67 | 2.0352 | 0.2245 |
| 47 | O6-H41_47-66 | 1.9663 | 0.1603 |
| 47 | H1-N3_47-66 | 1.9478 | 0.0847 |
| 47 | H21-O2_47-66 | 1.8911 | 0.1108 |
| 48 | O6-H41_48-65 | 1.9529 | 0.1518 |
| 48 | H1-N3_48-65 | 1.9463 | 0.0856 |
| 48 | H21-O2_48-65 | 1.8866 | 0.1172 |
| 49 | H41-O6_49-64 | 1.9986 | 0.2075 |
| 49 | N3-H1_49-64 | 1.9690 | 0.1125 |
| 49 | O2-H21_49-64 | 1.8850 | 0.1219 |
| 50 | N1-H3_50-63 | 1.9667 | 0.1425 |
| 50 | H61-O4_50-63 | 2.0035 | 0.2008 |
| 51 | N1-H3_51-62 | 1.9870 | 0.1207 |
| 51 | H61-O4_51-62 | 1.9745 | 0.1624 |
| 52 | H3-N1_52-61 | 1.9941 | 0.1139 |
| 52 | O4-H61_52-61 | 1.9724 | 0.1624 |
| 53 | H41-O6_53-60 | 1.9824 | 0.1740 |
| 53 | N3-H1_53-60 | 1.9449 | 0.0914 |
| 53 | O2-H21_53-60 | 1.8866 | 0.1227 |
| 54 | O6-H41_54-59 | 1.9479 | 0.1418 |
| 54 | H1-N3_54-59 | 1.9588 | 0.0890 |
| 54 | H21-O2_54-59 | 1.9077 | 0.1288 |
| 55 | H41-O6_55-58 | 1.9515 | 0.1536 |
| 55 | N3-H1_55-58 | 1.9509 | 0.0919 |
| 55 | O2-H21_55-58 | 1.8918 | 0.1212 |
| 56 | O6-H41_56-57 | 2.0897 | 0.7120 |
| 56 | H1-N3_56-57 | 2.0304 | 0.6482 |
| 56 | H21-O2_56-57 | 1.9955 | 0.6466 |
