NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.566	0.000	0.000	-0.030	0.000	0.000
Slide	0.000	3.516	1.315	0.000	-0.098	-0.244
Rise	0.000	1.315	7.740	0.000	-0.055	-0.152
Tilt	-0.030	0.000	0.000	0.028	0.000	0.000
Roll	0.000	-0.098	-0.055	0.000	0.024	0.010
Twist	0.000	-0.244	-0.152	0.000	0.010	0.045

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.888	0.000	0.000	0.020	0.000	0.000
Slide	0.000	5.449	2.665	0.000	-0.048	-0.217
Rise	0.000	2.665	10.258	0.000	0.000	-0.147
Tilt	0.020	0.000	0.000	0.044	0.000	0.000
Roll	0.000	-0.048	0.000	0.000	0.034	0.010
Twist	0.000	-0.217	-0.147	0.000	0.010	0.067

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.128	0.000	0.000	-0.121	0.000	0.000
Slide	0.000	2.128	0.832	0.000	0.002	-0.083
Rise	0.000	0.832	6.958	0.000	-0.059	-0.188
Tilt	-0.121	0.000	0.000	0.029	0.000	0.000
Roll	0.000	0.002	-0.059	0.000	0.016	0.007
Twist	0.000	-0.083	-0.188	0.000	0.007	0.019

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.054	0.000	0.000	-0.114	0.000	0.000
Slide	0.000	2.088	0.678	0.000	0.008	-0.082
Rise	0.000	0.678	7.097	0.000	-0.062	-0.190
Tilt	-0.114	0.000	0.000	0.028	0.000	0.000
Roll	0.000	0.008	-0.062	0.000	0.016	0.007
Twist	0.000	-0.082	-0.190	0.000	0.007	0.019

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.912	0.000	0.000	-0.064	0.000	0.000
Slide	0.000	1.995	1.242	0.000	-0.047	-0.138
Rise	0.000	1.242	6.850	0.000	-0.053	-0.157
Tilt	-0.064	0.000	0.000	0.033	0.000	0.000
Roll	0.000	-0.047	-0.053	0.000	0.023	0.012
Twist	0.000	-0.138	-0.157	0.000	0.012	0.028

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.313	0.000	0.000	-0.121	0.000	0.000
Slide	0.000	4.598	2.177	0.000	0.087	-0.207
Rise	0.000	2.177	10.039	0.000	0.135	-0.205
Tilt	-0.121	0.000	0.000	0.040	0.000	0.000
Roll	0.000	0.087	0.135	0.000	0.023	0.008
Twist	0.000	-0.207	-0.205	0.000	0.008	0.039

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.341	0.000	0.000	-0.121	0.000	0.000
Slide	0.000	4.484	2.141	0.000	0.076	-0.191
Rise	0.000	2.141	9.891	0.000	0.122	-0.198
Tilt	-0.121	0.000	0.000	0.040	0.000	0.000
Roll	0.000	0.076	0.122	0.000	0.023	0.010
Twist	0.000	-0.191	-0.198	0.000	0.010	0.038

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.886	0.000	0.000	-0.062	0.000	0.000
Slide	0.000	1.884	1.168	0.000	-0.043	-0.137
Rise	0.000	1.168	6.757	0.000	-0.039	-0.153
Tilt	-0.062	0.000	0.000	0.032	0.000	0.000
Roll	0.000	-0.043	-0.039	0.000	0.024	0.013
Twist	0.000	-0.137	-0.153	0.000	0.013	0.029

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.572	0.000	0.000	-0.026	0.000	0.000
Slide	0.000	3.362	1.230	0.000	-0.091	-0.226
Rise	0.000	1.230	7.667	0.000	-0.054	-0.129
Tilt	-0.026	0.000	0.000	0.027	0.000	0.000
Roll	0.000	-0.091	-0.054	0.000	0.024	0.009
Twist	0.000	-0.226	-0.129	0.000	0.009	0.043

[Image courtesy of Curves+]

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	Mean	Stdev
-aatt.5.cte	0.000	0.000

	Mean	Stdev
-atat.6.cte	0.000	0.000

	Mean	Stdev
-cgcg.3.cte	0.000	0.000

	Mean	Stdev
-cgcg.9.cte	0.000	0.000

	Mean	Stdev
-gatc.4.cte	0.000	0.000

	Mean	Stdev
-gcgc.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
-tcga.8.cte	0.000	0.000

	Mean	Stdev
-ttaa.7.cte	0.000	0.000

	Mean	Stdev
rise-10-GCGC	3.313	0.280

	Mean	Stdev
roll-10-GCGC	-0.774	6.489

	Mean	Stdev
shift-10-GCGC	0.000	0.786

	Mean	Stdev
slide-10-GCGC	-0.053	0.466

	Mean	Stdev
tilt-10-GCGC	0.000	4.482

	Mean	Stdev
twist-10-GCGC	30.956	5.391

	Mean	Stdev
rise-2-GCGC	3.307	0.282

	Mean	Stdev
roll-2-GCGC	-0.534	6.589

	Mean	Stdev
shift-2-GCGC	0.000	0.776

	Mean	Stdev
slide-2-GCGC	-0.053	0.462

	Mean	Stdev
tilt-2-GCGC	0.000	4.508

	Mean	Stdev
twist-2-GCGC	30.815	5.558

	Mean	Stdev
rise-3-CGCG	3.221	0.341

	Mean	Stdev
roll-3-CGCG	7.777	6.784

	Mean	Stdev
shift-3-CGCG	0.000	0.973

	Mean	Stdev
slide-3-CGCG	0.108	0.591

	Mean	Stdev
tilt-3-CGCG	0.000	6.077

	Mean	Stdev
twist-3-CGCG	33.488	7.724

	Mean	Stdev
rise-4-GATC	3.396	0.318

	Mean	Stdev
roll-4-GATC	2.919	5.742

	Mean	Stdev
shift-4-GATC	0.000	0.864

	Mean	Stdev
slide-4-GATC	-0.091	0.682

	Mean	Stdev
tilt-4-GATC	0.000	4.576

	Mean	Stdev
twist-4-GATC	34.253	6.519

	Mean	Stdev
rise-5-AATT	3.341	0.287

	Mean	Stdev
roll-5-AATT	2.554	5.289

	Mean	Stdev
shift-5-AATT	0.000	0.618

	Mean	Stdev
slide-5-AATT	-0.371	0.532

	Mean	Stdev
tilt-5-AATT	0.000	4.654

	Mean	Stdev
twist-5-AATT	35.300	4.685

	Mean	Stdev
rise-6-ATAT	3.313	0.257

	Mean	Stdev
roll-6-ATAT	-0.741	4.281

	Mean	Stdev
shift-6-ATAT	0.000	0.559

	Mean	Stdev
slide-6-ATAT	-0.869	0.371

	Mean	Stdev
tilt-6-ATAT	0.000	3.644

	Mean	Stdev
twist-6-ATAT	32.130	3.229

	Mean	Stdev
rise-7-TTAA	3.342	0.287

	Mean	Stdev
roll-7-TTAA	2.489	5.226

	Mean	Stdev
shift-7-TTAA	0.000	0.615

	Mean	Stdev
slide-7-TTAA	-0.377	0.534

	Mean	Stdev
tilt-7-TTAA	0.000	4.665

	Mean	Stdev
twist-7-TTAA	35.267	4.682

	Mean	Stdev
rise-8-TCGA	3.395	0.319

	Mean	Stdev
roll-8-TCGA	2.893	5.702

	Mean	Stdev
shift-8-TCGA	0.000	0.875

	Mean	Stdev
slide-8-TCGA	-0.056	0.700

	Mean	Stdev
tilt-8-TCGA	0.000	4.632

	Mean	Stdev
twist-8-TCGA	34.520	6.307

	Mean	Stdev
rise-9-CGCG	3.214	0.336

	Mean	Stdev
roll-9-CGCG	7.814	6.834

	Mean	Stdev
shift-9-CGCG	0.000	1.000

	Mean	Stdev
slide-9-CGCG	0.116	0.598

	Mean	Stdev
tilt-9-CGCG	0.000	6.191

	Mean	Stdev
twist-9-CGCG	33.193	7.599

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