NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.473	0.000	0.000	-0.067	0.000	0.000
Slide	0.000	3.125	1.351	0.000	-0.063	-0.194
Rise	0.000	1.351	8.083	0.000	-0.039	-0.143
Tilt	-0.067	0.000	0.000	0.031	0.000	0.000
Roll	0.000	-0.063	-0.039	0.000	0.024	0.007
Twist	0.000	-0.194	-0.143	0.000	0.007	0.041

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	2.253	0.000	0.000	0.001	0.000	0.000
Slide	0.000	5.826	2.860	0.000	-0.014	-0.229
Rise	0.000	2.860	11.010	0.000	0.059	-0.152
Tilt	0.001	0.000	0.000	0.048	0.000	0.000
Roll	0.000	-0.014	0.059	0.000	0.036	0.006
Twist	0.000	-0.229	-0.152	0.000	0.006	0.076

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.017	0.000	0.000	-0.111	0.000	0.000
Slide	0.000	2.589	0.416	0.000	0.009	-0.119
Rise	0.000	0.415	8.411	0.000	-0.094	-0.244
Tilt	-0.111	0.000	0.000	0.023	0.000	0.000
Roll	0.000	0.009	-0.094	0.000	0.016	0.007
Twist	0.000	-0.119	-0.244	0.000	0.007	0.024

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.001	0.000	0.000	-0.123	0.000	0.000
Slide	0.000	2.539	0.972	0.000	0.004	-0.115
Rise	0.000	0.973	7.126	0.000	-0.087	-0.248
Tilt	-0.123	0.000	0.000	0.026	0.000	0.000
Roll	0.000	0.004	-0.087	0.000	0.017	0.007
Twist	0.000	-0.115	-0.248	0.000	0.007	0.024

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.797	0.000	0.000	-0.085	0.000	0.000
Slide	0.000	2.089	1.301	0.000	-0.044	-0.130
Rise	0.000	1.301	7.418	0.000	-0.061	-0.176
Tilt	-0.085	0.000	0.000	0.033	0.000	0.000
Roll	0.000	-0.044	-0.061	0.000	0.023	0.011
Twist	0.000	-0.130	-0.176	0.000	0.011	0.030

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.240	0.000	0.000	-0.115	0.000	0.000
Slide	0.000	2.866	2.534	0.000	0.068	-0.065
Rise	0.000	2.534	10.504	0.000	0.179	-0.200
Tilt	-0.115	0.000	0.000	0.040	0.000	0.000
Roll	0.000	0.068	0.179	0.000	0.026	0.005
Twist	0.000	-0.065	-0.200	0.000	0.005	0.029

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.094	0.000	0.000	-0.077	0.000	0.000
Slide	0.000	2.811	0.846	0.000	0.018	-0.070
Rise	0.000	0.846	7.635	0.000	0.041	-0.147
Tilt	-0.077	0.000	0.000	0.028	0.000	0.000
Roll	0.000	0.018	0.041	0.000	0.021	0.004
Twist	0.000	-0.070	-0.147	0.000	0.004	0.020

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.795	0.000	0.000	-0.094	0.000	0.000
Slide	0.000	2.179	1.527	0.000	-0.047	-0.131
Rise	0.000	1.527	8.104	0.000	-0.052	-0.179
Tilt	-0.094	0.000	0.000	0.032	0.000	0.000
Roll	0.000	-0.047	-0.052	0.000	0.025	0.011
Twist	0.000	-0.131	-0.179	0.000	0.011	0.030

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.382	0.000	0.000	-0.063	0.000	0.000
Slide	0.000	3.069	1.355	0.000	-0.055	-0.202
Rise	0.000	1.355	7.977	0.000	-0.060	-0.181
Tilt	-0.063	0.000	0.000	0.031	0.000	0.000
Roll	0.000	-0.055	-0.060	0.000	0.025	0.007
Twist	0.000	-0.202	-0.181	0.000	0.007	0.042

[Image courtesy of Curves+]

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	Mean	Stdev
-aatt.5.cte	0.000	0.000

	Mean	Stdev
-atat.6.cte	0.000	0.000

	Mean	Stdev
-cgcg.3.cte	0.000	0.000

	Mean	Stdev
-cgcg.9.cte	0.000	0.000

	Mean	Stdev
-gatc.4.cte	0.000	0.000

	Mean	Stdev
-gcgc.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
-tcga.8.cte	0.000	0.000

	Mean	Stdev
-ttaa.7.cte	0.000	0.000

	Mean	Stdev
rise-10-GCGC	3.435	0.299

	Mean	Stdev
roll-10-GCGC	-2.283	5.373

	Mean	Stdev
shift-10-GCGC	0.000	0.804

	Mean	Stdev
slide-10-GCGC	-0.336	0.517

	Mean	Stdev
tilt-10-GCGC	0.000	4.476

	Mean	Stdev
twist-10-GCGC	34.307	5.167

	Mean	Stdev
rise-2-GCGC	3.385	0.306

	Mean	Stdev
roll-2-GCGC	-1.699	5.521

	Mean	Stdev
shift-2-GCGC	0.000	0.815

	Mean	Stdev
slide-2-GCGC	-0.281	0.485

	Mean	Stdev
tilt-2-GCGC	0.000	5.109

	Mean	Stdev
twist-2-GCGC	31.755	6.395

	Mean	Stdev
rise-3-CGCG	3.125	0.325

	Mean	Stdev
roll-3-CGCG	5.643	6.677

	Mean	Stdev
shift-3-CGCG	0.000	1.089

	Mean	Stdev
slide-3-CGCG	0.177	0.579

	Mean	Stdev
tilt-3-CGCG	0.000	7.162

	Mean	Stdev
twist-3-CGCG	33.555	7.533

	Mean	Stdev
rise-4-GATC	3.386	0.308

	Mean	Stdev
roll-4-GATC	2.648	5.543

	Mean	Stdev
shift-4-GATC	0.000	1.011

	Mean	Stdev
slide-4-GATC	0.058	0.630

	Mean	Stdev
tilt-4-GATC	0.000	5.003

	Mean	Stdev
twist-4-GATC	35.758	5.740

	Mean	Stdev
rise-5-AATT	3.371	0.282

	Mean	Stdev
roll-5-AATT	1.043	5.069

	Mean	Stdev
shift-5-AATT	0.000	0.665

	Mean	Stdev
slide-5-AATT	-0.484	0.526

	Mean	Stdev
tilt-5-AATT	0.000	4.590

	Mean	Stdev
twist-5-AATT	36.497	4.524

	Mean	Stdev
rise-6-ATAT	3.347	0.249

	Mean	Stdev
roll-6-ATAT	-1.992	4.098

	Mean	Stdev
shift-6-ATAT	0.000	0.510

	Mean	Stdev
slide-6-ATAT	-0.948	0.357

	Mean	Stdev
tilt-6-ATAT	0.000	3.485

	Mean	Stdev
twist-6-ATAT	32.990	2.991

	Mean	Stdev
rise-7-TTAA	3.347	0.288

	Mean	Stdev
roll-7-TTAA	0.945	4.973

	Mean	Stdev
shift-7-TTAA	0.000	0.684

	Mean	Stdev
slide-7-TTAA	-0.472	0.535

	Mean	Stdev
tilt-7-TTAA	0.000	4.582

	Mean	Stdev
twist-7-TTAA	36.137	4.623

	Mean	Stdev
rise-8-TCGA	3.348	0.296

	Mean	Stdev
roll-8-TCGA	2.653	5.300

	Mean	Stdev
shift-8-TCGA	0.000	1.063

	Mean	Stdev
slide-8-TCGA	0.042	0.619

	Mean	Stdev
tilt-8-TCGA	0.000	5.318

	Mean	Stdev
twist-8-TCGA	35.500	5.652

	Mean	Stdev
rise-9-CGCG	3.202	0.360

	Mean	Stdev
roll-9-CGCG	6.158	6.418

	Mean	Stdev
shift-9-CGCG	0.000	1.175

	Mean	Stdev
slide-9-CGCG	0.131	0.555

	Mean	Stdev
tilt-9-CGCG	0.000	7.238

	Mean	Stdev
twist-9-CGCG	33.937	7.074

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