Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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5' |
C |
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G |
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C |
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T |
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G |
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C |
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C |
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C |
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A |
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C |
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A |
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C |
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A |
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A |
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G |
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C |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
- |
C |
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G |
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A |
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C |
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G |
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G |
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G |
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T |
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G |
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T |
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G |
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T |
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T |
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C |
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G |
5' |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-32_O6-1 | 2.215 | 1.139 |
| Mean | Stdev |
1_N3-32_H1-1 | 2.122 | 0.847 |
| Mean | Stdev |
1_O2-32_H21-1 | 2.037 | 0.708 |
| Mean | Stdev |
10_H41-23_O6-10 | 1.978 | 0.166 |
| Mean | Stdev |
10_N3-23_H1-10 | 1.981 | 0.097 |
| Mean | Stdev |
10_O2-23_H21-10 | 1.887 | 0.119 |
| Mean | Stdev |
11_H61-22_O4-11 | 1.960 | 0.164 |
| Mean | Stdev |
11_N1-22_H3-11 | 1.976 | 0.125 |
| Mean | Stdev |
12_H41-21_O6-12 | 2.003 | 0.282 |
| Mean | Stdev |
12_N3-21_H1-12 | 1.995 | 0.198 |
| Mean | Stdev |
12_O2-21_H21-12 | 1.894 | 0.183 |
| Mean | Stdev |
13_H61-20_O4-13 | 2.005 | 0.195 |
| Mean | Stdev |
13_N1-20_H3-13 | 1.968 | 0.125 |
| Mean | Stdev |
14_H61-19_O4-14 | 2.009 | 0.187 |
| Mean | Stdev |
14_N1-19_H3-14 | 1.948 | 0.108 |
| Mean | Stdev |
15_H1-18_N3-15 | 1.962 | 0.093 |
| Mean | Stdev |
15_H21-18_O2-15 | 1.893 | 0.124 |
| Mean | Stdev |
15_O6-18_H41-15 | 1.967 | 0.159 |
| Mean | Stdev |
16_H41-17_O6-16 | 2.011 | 0.293 |
| Mean | Stdev |
16_N3-17_H1-16 | 2.006 | 0.144 |
| Mean | Stdev |
16_O2-17_H21-16 | 1.919 | 0.167 |
| Mean | Stdev |
2_H1-31_N3-2 | 1.955 | 0.089 |
| Mean | Stdev |
2_H21-31_O2-2 | 1.893 | 0.129 |
| Mean | Stdev |
2_O6-31_H41-2 | 1.943 | 0.149 |
| Mean | Stdev |
3_H41-30_O6-3 | 1.984 | 0.169 |
| Mean | Stdev |
3_N3-30_H1-3 | 1.974 | 0.097 |
| Mean | Stdev |
3_O2-30_H21-3 | 1.914 | 0.135 |
| Mean | Stdev |
4_H3-29_N1-4 | 1.958 | 0.115 |
| Mean | Stdev |
4_O4-29_H61-4 | 1.998 | 0.187 |
| Mean | Stdev |
5_H1-28_N3-5 | 1.972 | 0.096 |
| Mean | Stdev |
5_H21-28_O2-5 | 1.894 | 0.121 |
| Mean | Stdev |
5_O6-28_H41-5 | 1.968 | 0.163 |
| Mean | Stdev |
6_H41-27_O6-6 | 1.933 | 0.141 |
| Mean | Stdev |
6_N3-27_H1-6 | 1.959 | 0.088 |
| Mean | Stdev |
6_O2-27_H21-6 | 1.908 | 0.126 |
| Mean | Stdev |
7_H41-26_O6-7 | 1.960 | 0.157 |
| Mean | Stdev |
7_N3-26_H1-7 | 1.959 | 0.089 |
| Mean | Stdev |
7_O2-26_H21-7 | 1.902 | 0.129 |
| Mean | Stdev |
8_H41-25_O6-8 | 1.970 | 0.159 |
| Mean | Stdev |
8_N3-25_H1-8 | 1.966 | 0.092 |
| Mean | Stdev |
8_O2-25_H21-8 | 1.871 | 0.114 |
| Mean | Stdev |
9_H61-24_O4-9 | 1.950 | 0.159 |
| Mean | Stdev |
9_N1-24_H3-9 | 1.996 | 0.129 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-32 | 2.2148 | 1.1386 |
1 | N3-H1_1-32 | 2.1219 | 0.8469 |
1 | O2-H21_1-32 | 2.0370 | 0.7084 |
2 | O6-H41_2-31 | 1.9431 | 0.1491 |
2 | H1-N3_2-31 | 1.9549 | 0.0893 |
2 | H21-O2_2-31 | 1.8931 | 0.1288 |
3 | H41-O6_3-30 | 1.9838 | 0.1691 |
3 | N3-H1_3-30 | 1.9743 | 0.0965 |
3 | O2-H21_3-30 | 1.9141 | 0.1348 |
4 | H3-N1_4-29 | 1.9577 | 0.1150 |
4 | O4-H61_4-29 | 1.9979 | 0.1871 |
5 | O6-H41_5-28 | 1.9678 | 0.1627 |
5 | H1-N3_5-28 | 1.9721 | 0.0960 |
5 | H21-O2_5-28 | 1.8938 | 0.1214 |
6 | H41-O6_6-27 | 1.9330 | 0.1405 |
6 | N3-H1_6-27 | 1.9593 | 0.0882 |
6 | O2-H21_6-27 | 1.9082 | 0.1258 |
7 | H41-O6_7-26 | 1.9599 | 0.1568 |
7 | N3-H1_7-26 | 1.9589 | 0.0886 |
7 | O2-H21_7-26 | 1.9021 | 0.1293 |
8 | H41-O6_8-25 | 1.9701 | 0.1594 |
8 | N3-H1_8-25 | 1.9655 | 0.0919 |
8 | O2-H21_8-25 | 1.8708 | 0.1135 |
9 | N1-H3_9-24 | 1.9959 | 0.1288 |
9 | H61-O4_9-24 | 1.9503 | 0.1592 |
10 | H41-O6_10-23 | 1.9784 | 0.1663 |
10 | N3-H1_10-23 | 1.9814 | 0.0965 |
10 | O2-H21_10-23 | 1.8870 | 0.1195 |
11 | N1-H3_11-22 | 1.9763 | 0.1254 |
11 | H61-O4_11-22 | 1.9599 | 0.1640 |
12 | H41-O6_12-21 | 2.0033 | 0.2820 |
12 | N3-H1_12-21 | 1.9953 | 0.1984 |
12 | O2-H21_12-21 | 1.8939 | 0.1834 |
13 | N1-H3_13-20 | 1.9677 | 0.1254 |
13 | H61-O4_13-20 | 2.0054 | 0.1947 |
14 | N1-H3_14-19 | 1.9478 | 0.1080 |
14 | H61-O4_14-19 | 2.0085 | 0.1872 |
15 | O6-H41_15-18 | 1.9667 | 0.1591 |
15 | H1-N3_15-18 | 1.9622 | 0.0934 |
15 | H21-O2_15-18 | 1.8927 | 0.1243 |
16 | H41-O6_16-17 | 2.0115 | 0.2931 |
16 | N3-H1_16-17 | 2.0059 | 0.1440 |
16 | O2-H21_16-17 | 1.9193 | 0.1668 |